Nucleotide Global Alignment

Description

Query:
ccsbBroad304_03863
Subject:
XR_937537.3
Aligned Length:
4194
Identities:
894
Gaps:
3300

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGAGTTGGGGCAAAACAGGAGGCGTTTCCCTACCCGCATACATCCCCGTCCCCGAGACACCCAATCCCCCCAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCAGCCTGCCCGCGCCTCCCGCCCCCAGCTCCTCGCCCTGGGGACAGCTGGCAGCCCCGCGCGGACCAGACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAAAGCCGATCAATCCCGGAGGCGTGGGGGCGGAGGGACGACCCGCCGGGGCTTTCCCGGGCGCTGCTCTCCTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGCTGCCCCCTCGCTAGGACCCGGCGGACGCCTCGTCTGGTTTTCACGCCCTCTAGCCCCTACCCCCACACCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCAAAACAGAACAGACCCCCATCCCTGGGCTGGAGGACCCGCCTCTTGGCAGCCAGCTGAGAAGGCGCCCCGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAGGGGGAAACTGACATCCCATCTAGAGCCGTCCCTCCTCTTCCTCCCCTCCCGACTCTCTGCTCCTTTCCCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCCAGAAGTTCAAGGGCCCCCGGCCTCCTGCGCTCCTGCCGCCGGGACCCTCGACCTCCTCAGAGCAGCCGGCT  518

Query    1  --------------ATGGCGAGGAGGAGCCGCCACCGCCTCCTCCTGCTGCTGCTGCGCTACCTGGTGGTCGCC  60
                          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCGCCCCGGGAAGATGGCGAGGAGGAGCCGCCACCGCCTCCTCCTGCTGCTGCTGCGCTACCTGGTGGTCGCC  592

Query   61  CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGA  134
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGGGCTATCATAAGGCCTATGGGTTTTCTGCCCCAAAAGACCAACAAGTAGTCACAGCAGTAGAGTACCAAGA  666

Query  135  GGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTG  208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCTATTTTAGCCTGCAAAACCCCAAAGAAGACTGTTTCCTCCAGATTAGAGTGGAAGAAACTGGGTCGGAGTG  740

Query  209  TCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTAAAAATCGAGCTGAGATGATAGATTTCAATATC  282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TCTCCTTTGTCTACTATCAACAGACTCTTCAAGGTGATTTTAAAAATCGAGCTGAGATGATAGATTTCAATATC  814

Query  283  CGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCA  356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CGGATCAAAAATGTGACAAGAAGTGATGCGGGGAAATATCGTTGTGAAGTTAGTGCCCCATCTGAGCAAGGCCA  888

Query  357  AAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCTT  430
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAACCTGGAAGAGGATACAGTCACTCTGGAAGTATTAGTGGCTCCAGCAGTTCCATCATGTGAAGTACCCTCTT  962

Query  431  CTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATGG  504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTGCTCTGAGTGGAACTGTGGTAGAGCTACGATGTCAAGACAAAGAAGGGAATCCAGCTCCTGAATACACATGG  1036

Query  505  TTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAA  578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTTAAGGATGGCATCCGTTTGCTAGAAAATCCCAGACTTGGCTCCCAAAGCACCAACAGCTCATACACAATGAA  1110

Query  579  TACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCA  652
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TACAAAAACTGGAACTCTGCAATTTAATACTGTTTCCAAACTGGACACTGGAGAATATTCCTGTGAAGCCCGCA  1184

Query  653  ATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAACATAAGTGGCATCATAGCA  726
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATTCTGTTGGATATCGCAGGTGTCCTGGGAAACGAATGCAAGTAGATGATCTCAACATAAGTGGCATCATAGCA  1258

Query  727  GCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGTATGCTATGCTCAGAGGAAAGGCTACTT  800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGTATGCTATGCTCAGAGGAAAGGCTACTT  1332

Query  801  TTCAAAAGAAACCTCCTTCCA-----------------------------------------------------  821
            |||||||||||||||||||||                                                     
Sbjct 1333  TTCAAAAGAAACCTCCTTCCAATCTGGCAGACCTAACTTTGGCTCTATGGGCGTAGAGAGAAGATGGATGACAA  1406

Query  822  --------------------------------------------------------------------------  821
                                                                                      
Sbjct 1407  ACTATCTGAGGCTATGGCAGCTGGGAGTGGAGAAGATATACTGAAGCCATGGCTTCAGACAGTTTGTCATCTCC  1480

Query  822  --------------------------------------------------------------------------  821
                                                                                      
Sbjct 1481  TAATTCCTTTGAAGAATCATCTGCCATTGACTTCCTGTTCCCAGATTTCTGGCTCAATCCTGGTCTCTCAGTCT  1554

Query  822  -GAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATT  894
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CGAAGAGTAATTCTTCATCTAAAGCCACGACAATGAGTGAAAATGATTTCAAGCACACAAAATCCTTTATAATT  1628

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1629  TAAAGACTCCACTTTAGAGATACACCAAAGCCACCGTTGTTACACAAGTTATTAAACTATTATAAAACTCTGCT  1702

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1703  TTGTCCGACATTTGCAAAGAGGTACACGAGGAAATGGAATTGGTATTTCATTTTAATTTTCATGACTACTAACT  1776

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1777  CACCTGAACTTGCTATTTTAAACAAATAGTTCTGTCGACACCTAAAATATAATCTGGCTTCTTGTGTCTGGACT  1850

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1851  AAGTTAAAAGAATTAAAATACTTTGTAATGTCCTGGGCTTTGGGAAATGTTAACCACGTCCTAACTTCTAGAGA  1924

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1925  ACGTTACTAAAATATAACATACTGATTGTGAAGTCAATCCACAGGTCATGAAAATATAAATCAGACTCTGCACG  1998

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 1999  AGAGTCTGATTTAGGGGGTCCAACAAATACTCTGACAGATGCAAAAGGAACCTCTGGTCTCATTTCTGCCAGAA  2072

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2073  TCCTCTTTTCTCCCCTAATATCATCCTTATTCTGATGCTCGTTCATCACTAACACACCCACAGAAAGGAGGAAG  2146

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2147  CGGGATGGGTCTTATGCCCAAGGATTTGCACTTTGTGTTTACTTCCATTCCTGGGAACTAAAAGCAACATCAAA  2220

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2221  AGAAATGCCTAATGGCTGGAGCCCACAGGTGTGCACCACAGGATTTGCCTGGTGTGTGTCACTGATTTCTTCAT  2294

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2295  TAAACGTAATTTAGATGGTCAAACACAAACCCAAGTGGCTTATTTCACCCCTACTGCTGCTTGCCACTGCTTCC  2368

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2369  TTCTTGTAAGATTTCTTTGAAGAGGATCAGTGACTTTGACATCAGAACTCACCACTGGAGCCTACACAAGTTTG  2442

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2443  CAGATACCTTTCCCTGCAGGAGTGGTGACTTCACATCTTTCTGTCTCTAAAAATTGTGCAGTGACATTCCGGGC  2516

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2517  CAAGTCCCTTAGTCAGGGGTTGACAATTCTGCTTTTGGACAAGGAGGGATGTGGAGGGAAGAAGTAATAGTCTA  2590

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2591  CCAGGAAAATGAGACGAAAAAGCTCAGTATGACTCCCTGCATCTGGTACCCCTCTTGAAACACAGTGGGCACAT  2664

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2665  GAGCAATGGCTCAAACGAAAAGTGGATCTAATGTGGGTTTCTCAACCGATGAACCACAAAAGCTTCCAGCTACT  2738

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2739  ATTACAATGTGAAAATTCCAATGATCCGTTTACCAGAGCAATTAGACTATGTTAAAAATTCATATCATTTGTAA  2812

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2813  CTTCTTTTAATTACTGAATTGATATTAAAAACAAAATATGGCTAGGGCATGTCCTATTCTTCTGGGCAAATGTG  2886

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2887  GATGAAAAGGTCACTTGCTACCTTTGACAACTATGAACATGATGGTTAATCTTCTTTCTTTTTTTTTTTTTTTT  2960

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 2961  TTTGAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCACAATCTTGGCTCACTGCAACCTCCGCC  3034

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3035  TCCCCTCCGCCTCCCAGATTCAAGCACTTCTCCTGCCTCAGCCTCCCAAGTAGCTGAGATTATAGGCGTGTACC  3108

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3109  ACCACACCTGGCTAATTTTTGTATTTTAGTAGAGAAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACCTCT  3182

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3183  GACCTCAAATGATCCACCCCCATCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGCACTGGGCAGG  3256

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3257  TTAATCTTCTTTCAAAAGAGTCTGCTCTTTCTACCCAATTGGCGAAGCAAATCCCCAGGATTCACCGAACAAAT  3330

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3331  GGATTAAGCACCCACTGAGTGCCTAGCATGTGCCTGGACACCAGGCCACCGGGAAGATGCTCCCCCTTTGACTT  3404

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3405  GTCTATGACATGCTATGTCTCTCACCAGATCCCTTCCTGGAGGTCGGGCTTCTGTAACATGGCTCTGCCCCCAA  3478

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3479  AATAAAATTTTCACCACGAGTCAGGGATCGGCAAACATTTTCTGTAAAGAGCCAGAAAGTAGATATTTTAAGTC  3552

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3553  ATAAGGTCCCTGTTAACAACTACTTGACTCTGCCATTGTAGCACAAAGGCAGCCACAGACAAAACAAGCAAGTA  3626

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3627  GTCATGTCTGTGTTCCAATAAGACTTTATTTACAAAAACAGCAGGCACAGACAAGATTTGGCCCACAGGCATAG  3700

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3701  ATTCCCAACTCATGGTGGTGAAGTACAGAAAAAAACACCTGTCTACAAGCTTTTGTAAGAAATCAGGCTAAATG  3774

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3775  TTACCTATGTTTTGGTTGGAAGATTTCTTTGGTTTGAGGAATGCTTTCCTCTTGCATTGGCATGCCAAGAGGAT  3848

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3849  AGATGACTCTGAAAGACGCCTCTTCAGACATACCTGTCATCACACAAGATCAACTTCTTCAGTTTAAATGACAC  3922

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3923  AAATCCATATTGTGGAAGGAAAATATGTAGTGCCTTAGCTTCACTAATAGTTGTAAAACTTCTTTTTAAGACAT  3996

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 3997  CAAAGGCTAGAGGATTCATTTTATGCAGTGCGAACATCTAATAACACTCTCTGTGTCAAATATATATTGTACAT  4070

Query  895  --------------------------------------------------------------------------  894
                                                                                      
Sbjct 4071  TACCTTAAACTATTGTAATAGCTAGGTAAAAATCCTTGTATAAAAGAATGTTTTCCCCCACACAAAGGGCAGAG  4144

Query  895  --------------------------------------------------  894
                                                              
Sbjct 4145  TATTGAGCACTAATTTCCTATTAAAAGTATATATATGTATCTGTGGGTCA  4194

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