Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04579
- Subject:
- XR_001746416.2
- Aligned Length:
- 3810
- Identities:
- 786
- Gaps:
- 3024
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTCCTTAGTAACCTGGGCGATAGCTGATGAGACGGAAGTCCTGAGAGTTTGACCGATTTAAGGTCACGTGCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGAAGTGCTGGAACCAAGACTCGGAGTTTTCTCTAAGTTTAGTGCCTTTATTTTGTTTTAAACCACACTGTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CATTTCCCCCCATTTTGGAAAGCTTTATAGTTGGAAAGAATGAAAACCTGATCTGACCCCTTCATTTTATGGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAACAAAATCTACGTAGGAGAAATCACTTGGTACAAGTCACAAGTCAGTGGTAGAGCTGCCGCAAATGCTTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAATACGTGTGATTATGAATCTAAATGGCAGATGGCAGGGAGTGATAAGTGGATGTTTCCAAGGATTGTCTTC 370
Query 1 ----ATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGTCATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA 444
Query 71 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCA 518
Query 145 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAA 592
Query 219 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAG 666
Query 293 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTA 740
Query 367 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAA 814
Query 441 TATGGCCAGCTTCCCAGAGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TATGGCCAGCTTCCCAGAGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTGGAATGAATCTGAACCCAG 888
Query 515 AAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCC-------------------------------------- 550
||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAAATGTGAGTGCTTTGAGAGGAGAGAGGAAGAGCTTTG 962
Query 551 ----------------------------------------------------AAGTAACCAGAGAGCACAGAGA 572
||||||||||||||||||||||
Sbjct 963 TCAGTTTTGTTCATTGCTGTATTCCTAGGCCCTCAAACAGAGCCTAGCATGTAAGTAACCAGAGAGCACAGAGA 1036
Query 573 AATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAA 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGAAGGTTCGCACCAACTCAA 1110
Query 647 TGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATAGAGAAACAGATCAGCCAA 1184
Query 721 ATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGA-------- 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGAACTCCTTGGATGAAAGTC 1258
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1259 CACTGGGGCCAGCAATACTCCAGAGCCCAGTTTCTGCTGGATCCCATGGGTGGCACATTGGGACTTCTCTCCCT 1332
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1333 CCCCCATCTACACAGAAGACTGTCACCATGCTGACAGAAGCCTGTCCTTGTAAGGCCCAGCCTTCCAGGGGAAC 1406
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1407 ACTCAGACATGTTCATTCTCTTCCTGCTTCTGCTCTGGGCCGGTGGGTGGCTCTCAGAAAATACTTGCTGCTGG 1480
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1481 CAAAAGGCCTGTACTCAGGCATTTGCTTTGACTTGATGTTGCCAAGGGACTGAGGCCATTGGCAGGCTTAGTAC 1554
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1555 CACCTGCTCCTCATCTTAGGAGTCTCCTTTTCAAATAATTAGGCTCTGTTCCCATTTTAAAACTCTGATATTGG 1628
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1629 CCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATTTTCACTAAACAATAAAATCTAAATAAATTGGAAGGA 1702
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1703 ATAACAACCACAAAGGAAAGAATAGAGTTGGTCTGGATTGATGATCACTGAGGATCTGTATGTGAGGCACCCAT 1776
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1777 AACAGTAGTTTTGCCTGTGAGTCGTCTTCACACATGCTGTTTTCTCTGCCTGGCTCTCTCTTCCCCTCCTTACC 1850
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1851 TGGCCAGTCCTGTTTATCATCAGGCCTTGTCTTGGATATCACGTCCTCTGGGAAGTCTTCTTTTCCCCTCTAAC 1924
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1925 CTAGGACCCTCATTACCGGCTCTCATAGCACAGTCTACTGCTTTGTACGAATTCTAAGTATTCTTGTTGCACTT 1998
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1999 AATTAGCCTGTATATCCTCAGAACTTTGTGTAATGCCTGGAGCATAGTAGGCAGTCATATGTTGTATCGTGAAT 2072
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2073 AAATTGCACATAGTAGCTACCCAGCAAATGCTGACTTCTTTTCTTTCTAGTCTTAACACTCCCTTTCTATCATT 2146
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2147 TTCCACTCTTGTACTTGTTCTCAACATTTACTTGGTAGTGACATACCTTTCCTGCAGGGCCTGCCCATTGTTGA 2220
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2221 CAGACAAGTAGTTTATTGTGGCTTATCTTCGGATACTGGGTTATTAGGTTTTTTTCCCTCCAATTATTTTTTAT 2294
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2295 TCATTCATTCATTCCTAATATAGCCATTATGAGTTAGGTATAGTTCTAGGCATTATTTATAATCTTGACAGTAA 2368
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2369 ACTTAAGAGATGTGTATTATCTTCATTTACAAATAGGAAAACTAAGTCTTGACAGTATTAGGTAATTTGCCCAA 2442
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2443 AGTAACAAAGCAAAGCTGATCAGTGGTAGAAGGTTTTCATGATTCATTGTCAGCGTCATTTACATAGAGGTGAA 2516
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2517 GTTTCTTGTGCAGGGTTACACACCTAGCAAGTAGCAGAGCTGGCATTCAAATTGAGGCCTGATGTGCTAATGTA 2590
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2591 AAAGGAAAAAAACAAACTTTTTTTCCTTTTGTACTTTCACACTCAACATGGAACACTTCTGTGACAAGGTGTGT 2664
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2665 GAGTTTGTTTCCCCCACACACCAAGCAATTCTCCAGCAGACACCAACTGGGTATCCTATAATTCAATTCATTTC 2738
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2739 TGACATTACCTGGAAATAGTGTCAGATCCCACAGGTTGAGGGCTCCATCTCCCAAGACTGCCAACACTTTTGAT 2812
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2813 GCCAGTCATGAGTCTGGGCCACCCATACTCCTGACTGACCAACTACAAACTAGAGTCCTTGATTTCCTTTGGTT 2886
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2887 CAGTTAATTTCCTAGGACAGCTCACACAACTCAGGGAAACACGTTCACTGGTTTATTATAAAAGATACAGCTGA 2960
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2961 ACAGCCCAATGAAGGAGGTACACAGGGCAAGGTTGAGGGAGAGGGAGAGGGTGTGGAGCTTCCATGCCTTCTCT 3034
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3035 GGGCTCACACTCTCTCAGCACCTCACCAATCTGGAAGGAACCACTGTGTCCTGCTGCCTTCATTAGCATTTAGT 3108
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3109 GAGCACCAATTGTTTGTCAGGTGCTGAACTATGTACTGGCAATACAAAAATGGGAAAGATATGACCCCTGTTTT 3182
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3183 GGGGGGGTACATAGTGCACTGAACTAAATTGCTGTCTATAATAATCTATTGGGTGGAAAAGTAGGAAGTTCATT 3256
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3257 CCAGTTCTGCAAGGTGTCTGCTTTCAGAATGGAGCCCACTTTGGTGGTGGCAAGGCCTGGCTGAGTTCTTTCAA 3330
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3331 AGCAACATCCAACTTCTCTTTGCTCTTTGACTTCCTCCAGATTCTCTCCTGTGCTGGAGGTAATAAGGGTTGCA 3404
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3405 CTTCCCTCTTTACTTACACTGGTGAAACATGCAGTGAGGATTCAAGGTCAAAATTGGGTCAAAGTTAAACTAAC 3478
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3479 ACAGTCTCCTGCCCCACTTACCTGTCCTCTAACCCCATCCACCAGCCCTAAGTGGTCATCACATGATCAGAAGT 3552
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3553 CAGCTGGGGGAAGAGCAGGGATAGATAGAGCAATTAAGGAGCCTCTTTTGGGGTAAGCCACATGACAGGGGCTT 3626
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3627 TGCAACAGTCTTTCATGAGTGGCCGAAATCCCCCACTCACTGCAAATGTGCTTCTCAAAGATGCAGGATTTTTT 3700
Query 787 -------------------------------------------------------------------------- 786
Sbjct 3701 AATAAACAGAGGAAATGATAAATTATGTTGTAATTCCACTCCAAAGGCATTTGGTTCTTAACAGCCAAATCCTC 3774
Query 787 ------------------------------------ 786
Sbjct 3775 TGTAGTCTTTAAATAAACAAAAACTTATTTGGTGAA 3810
