Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_04579
- Subject:
- XR_002956825.1
- Aligned Length:
- 2562
- Identities:
- 786
- Gaps:
- 1776
Alignment
Query 1 -------------------------------------------------ATGGCCTTGGGATTAAAGTGCTTCC 25
|||||||||||||||||||||||||
Sbjct 1 TAGTAACCTGGGCGATAGCTGTGGATGTTTCCAAGGATTGTCTTCAGTCATGGCCTTGGGATTAAAGTGCTTCC 74
Query 26 GCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCAGACCCGTTTCAGAAGTTACACTGAAGACA 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCAGACCCGTTTCAGAAGTTACACTGAAGACA 148
Query 100 GTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCAGCTGTACCAGTCCGCCATTTTGCTACCAA 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCAGCTGTACCAGTCCGCCATTTTGCTACCAA 222
Query 174 GAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAATATTAATGCTGCCTTGGTTGAGGATATAA 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAATATTAATGCTGCCTTGGTTGAGGATATAA 296
Query 248 TCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAGCTCTCAAGGATAATTTCAATAAGACTCTC 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAGCTCTCAAGGATAATTTCAATAAGACTCTC 370
Query 322 AATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCA 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCA 444
Query 396 GATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAATATGGCCAGCTTCCCAG------------ 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAATATGGCCAGCTTCCCAGAGGTAAGATGGC 518
Query 458 -------------------------------------------------------------------------- 457
Sbjct 519 CTTGCTAAAATCTCTCTCCGTGGTCTCTTTTGGAATGGAGGAGACTGGGTCATATCAGGAGGAAGTGTTCCTTC 592
Query 458 -------------------------------------------------------------------------- 457
Sbjct 593 AGCTTAGGATGAAACAAGAGAGAAGACATAATAAAGAGAACTTAAGGATAAGGCAAAGCTCTTTTCCTGTTGCC 666
Query 458 -------------------------------------------------------------------------- 457
Sbjct 667 AGATTCCTTTTCTGTTAAACTCAGATGCTACAGAGGCTAGGTAAGTTGTTTGAATACCCAAACGGGTCCCATCT 740
Query 458 -------------------------------------------------------------------------- 457
Sbjct 741 AAGAAAAACAATACTGGAGATGCAGTGATTGGTGCTTGGCCAGCGTGAAAAGGCTCTGGTGAGCTGGAGAGCCT 814
Query 458 -------------------------------------------------------------------------- 457
Sbjct 815 GTACCTTGTGTGAGTGGAATGCCTCTGCCCAGCTCCTGCTGATCATTGCCAGGCACAATGTAGGCCTGGTAATC 888
Query 458 -------------------------------------------------------------------------- 457
Sbjct 889 AGTGTTACCTGATACTACGATTTTTATTTCCAGAAGAAGCTAGTAACACAAATTTTTATGTGACATCTTTATTC 962
Query 458 -------------------------------------------------------------------------- 457
Sbjct 963 TGTAAATGTTGATGACTAATTGAGTTTTTTTTTTAAAGACTATGAAGCAAATAAAACAATACTTTAATGGGCCA 1036
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1037 AATGTGGCCTGAGGGCCACCAATTTGTGACCTCTGCATTAGTATTTGGAGCAGACCCTCCAGGAAGTCCTTTTA 1110
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1111 TACTAGACTGACCATTGCAGAATATTGCATGGAGCACAGTGCTTCCAAAACTGGAAGGAATTGGCCTGGATTAG 1184
Query 458 -------------------------------------------------------------------------- 457
Sbjct 1185 GAGTCTTAGAGTACCTGGAATCCGGTCCCATCTCTACCACCAACTGGCTGTTTGACCTTGGGCAAGTTGCTTCA 1258
Query 458 -----------------------------------AGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTG 496
|||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTCTCTGGGCCTCCATTTCCTCATCTGCTAATATAAGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTG 1332
Query 497 GAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCC-------------------- 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAAATGTGAGTGCTTTGAGAG 1406
Query 551 ----------------------------------------------------------------------AAGT 554
||||
Sbjct 1407 GAGAGAGGAAGAGCTTTGTCAGTTTTGTTCATTGCTGTATTCCTAGGCCCTCAAACAGAGCCTAGCATGTAAGT 1480
Query 555 AACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGA 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGA 1554
Query 629 AGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATA 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 AGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATA 1628
Query 703 GAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGA 1702
Query 777 ACTCCTTGGA---------------------------------------------------------------- 786
||||||||||
Sbjct 1703 ACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATACTCCAGAGCCCAGTTTCTGCTGGATCCCATGGGTGGCAC 1776
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1777 ATTGGGACTTCTCTCCCTCCCCCATCTACACAGAAGACTGTCACCATGCTGACAGAAGCCTGTCCTTGTAAGGC 1850
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1851 CCAGCCTTCCAGGGGAACACTCAGACATGTTCATTCTCTTCCTGCTTCTGCTCTGGGCCGGTGGGTGGCTCTCA 1924
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1925 GAAAATACTTGCTGCTGGCAAAAGGCCTGTACTCAGGCATTTGCTTTGACTTGATGTTGCCAAGGGACTGAGGC 1998
Query 787 -------------------------------------------------------------------------- 786
Sbjct 1999 CATTGGCAGGCTTAGTACCACCTGCTCCTCATCTTAGGAGTCTCCTTTTCAAATAATTAGGCTCTGTTCCCATT 2072
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2073 TTAAAACTCTGATATTGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATTTTCACTAAACAATAAAAT 2146
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2147 CTAAATAAATTGGAAGGAATAACAACCACAAAGGAAAGAATAGAGTTGGTCTGGATTGATGATCACTGAGGATC 2220
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2221 TGTATGTGAGGCACCCATAACAGTAGTTTTGCCTGTGAGTCGTCTTCACACATGCTGTTTTCTCTGCCTGGCTC 2294
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2295 TCTCTTCCCCTCCTTACCTGGCCAGTCCTGTTTATCATCAGGCCTTGTCTTGGATATCACGTCCTCTGGGAAGT 2368
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2369 CTTCTTTTCCCCTCTAACCTAGGACCCTCATTACCGGCTCTCATAGCACAGTCTACTGCTTTGTACGAATTCTA 2442
Query 787 -------------------------------------------------------------------------- 786
Sbjct 2443 AGTATTCTTGTTGCACTTAATTAGCCTGTATATCCTCAGAACTTTGTGTAATGCCTGGAGCATAGTAGGCAGTC 2516
Query 787 ---------------------------------------------- 786
Sbjct 2517 ATATGTTGTATCGTGAATAAATTGCACATAGTAGCTACCCAGCAAA 2562
