Nucleotide Global Alignment

Description

Query:
ccsbBroad304_04579
Subject:
XR_002956825.1
Aligned Length:
2562
Identities:
786
Gaps:
1776

Alignment

Query    1  -------------------------------------------------ATGGCCTTGGGATTAAAGTGCTTCC  25
                                                             |||||||||||||||||||||||||
Sbjct    1  TAGTAACCTGGGCGATAGCTGTGGATGTTTCCAAGGATTGTCTTCAGTCATGGCCTTGGGATTAAAGTGCTTCC  74

Query   26  GCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCAGACCCGTTTCAGAAGTTACACTGAAGACA  99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCAGACCCGTTTCAGAAGTTACACTGAAGACA  148

Query  100  GTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCAGCTGTACCAGTCCGCCATTTTGCTACCAA  173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTATTCAGCTGTACCAGTCCGCCATTTTGCTACCAA  222

Query  174  GAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAATATTAATGCTGCCTTGGTTGAGGATATAA  247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACCAGAGTGAATATTAATGCTGCCTTGGTTGAGGATATAA  296

Query  248  TCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAGCTCTCAAGGATAATTTCAATAAGACTCTC  321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCAACTTGGAAGAGGTGAATGAAGAAATGAAGTCTGTGATAGAAGCTCTCAAGGATAATTTCAATAAGACTCTC  370

Query  322  AATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCA  395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATATAAGGACCTCACCAGGATCCCTTGACAAGATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCA  444

Query  396  GATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAATATGGCCAGCTTCCCAG------------  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct  445  GATTAGCCAGATCTCCATGAAGTCGCCACAGCTGATTTTGGTGAATATGGCCAGCTTCCCAGAGGTAAGATGGC  518

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  519  CTTGCTAAAATCTCTCTCCGTGGTCTCTTTTGGAATGGAGGAGACTGGGTCATATCAGGAGGAAGTGTTCCTTC  592

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  593  AGCTTAGGATGAAACAAGAGAGAAGACATAATAAAGAGAACTTAAGGATAAGGCAAAGCTCTTTTCCTGTTGCC  666

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  667  AGATTCCTTTTCTGTTAAACTCAGATGCTACAGAGGCTAGGTAAGTTGTTTGAATACCCAAACGGGTCCCATCT  740

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  741  AAGAAAAACAATACTGGAGATGCAGTGATTGGTGCTTGGCCAGCGTGAAAAGGCTCTGGTGAGCTGGAGAGCCT  814

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  815  GTACCTTGTGTGAGTGGAATGCCTCTGCCCAGCTCCTGCTGATCATTGCCAGGCACAATGTAGGCCTGGTAATC  888

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  889  AGTGTTACCTGATACTACGATTTTTATTTCCAGAAGAAGCTAGTAACACAAATTTTTATGTGACATCTTTATTC  962

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct  963  TGTAAATGTTGATGACTAATTGAGTTTTTTTTTTAAAGACTATGAAGCAAATAAAACAATACTTTAATGGGCCA  1036

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1037  AATGTGGCCTGAGGGCCACCAATTTGTGACCTCTGCATTAGTATTTGGAGCAGACCCTCCAGGAAGTCCTTTTA  1110

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1111  TACTAGACTGACCATTGCAGAATATTGCATGGAGCACAGTGCTTCCAAAACTGGAAGGAATTGGCCTGGATTAG  1184

Query  458  --------------------------------------------------------------------------  457
                                                                                      
Sbjct 1185  GAGTCTTAGAGTACCTGGAATCCGGTCCCATCTCTACCACCAACTGGCTGTTTGACCTTGGGCAAGTTGCTTCA  1258

Query  458  -----------------------------------AGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTG  496
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCTCTGGGCCTCCATTTCCTCATCTGCTAATATAAGTGTACAGCTGCAGCTATCAAGGCTATAAGAGAAAGTG  1332

Query  497  GAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCC--------------------  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct 1333  GAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAAATGTGAGTGCTTTGAGAG  1406

Query  551  ----------------------------------------------------------------------AAGT  554
                                                                                  ||||
Sbjct 1407  GAGAGAGGAAGAGCTTTGTCAGTTTTGTTCATTGCTGTATTCCTAGGCCCTCAAACAGAGCCTAGCATGTAAGT  1480

Query  555  AACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGA  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AACCAGAGAGCACAGAGAAATGCTGGTGAAACTGGCCAAACAGAACACCAACAAGGCCAAAGACTCTTTACGGA  1554

Query  629  AGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATA  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGGTTCGCACCAACTCAATGAACAAGCTGAAGAAATCCAAGGATACAGTCTCAGAGGACACCATTAGGCTAATA  1628

Query  703  GAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGA  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GAGAAACAGATCAGCCAAATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGAAGACCAAAGA  1702

Query  777  ACTCCTTGGA----------------------------------------------------------------  786
            ||||||||||                                                                
Sbjct 1703  ACTCCTTGGATGAAAGTCCACTGGGGCCAGCAATACTCCAGAGCCCAGTTTCTGCTGGATCCCATGGGTGGCAC  1776

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1777  ATTGGGACTTCTCTCCCTCCCCCATCTACACAGAAGACTGTCACCATGCTGACAGAAGCCTGTCCTTGTAAGGC  1850

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1851  CCAGCCTTCCAGGGGAACACTCAGACATGTTCATTCTCTTCCTGCTTCTGCTCTGGGCCGGTGGGTGGCTCTCA  1924

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1925  GAAAATACTTGCTGCTGGCAAAAGGCCTGTACTCAGGCATTTGCTTTGACTTGATGTTGCCAAGGGACTGAGGC  1998

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1999  CATTGGCAGGCTTAGTACCACCTGCTCCTCATCTTAGGAGTCTCCTTTTCAAATAATTAGGCTCTGTTCCCATT  2072

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2073  TTAAAACTCTGATATTGGCCTTCACCTGTGACTGGACACTTTACTAGAGGCCCATTTTCACTAAACAATAAAAT  2146

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2147  CTAAATAAATTGGAAGGAATAACAACCACAAAGGAAAGAATAGAGTTGGTCTGGATTGATGATCACTGAGGATC  2220

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2221  TGTATGTGAGGCACCCATAACAGTAGTTTTGCCTGTGAGTCGTCTTCACACATGCTGTTTTCTCTGCCTGGCTC  2294

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2295  TCTCTTCCCCTCCTTACCTGGCCAGTCCTGTTTATCATCAGGCCTTGTCTTGGATATCACGTCCTCTGGGAAGT  2368

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2369  CTTCTTTTCCCCTCTAACCTAGGACCCTCATTACCGGCTCTCATAGCACAGTCTACTGCTTTGTACGAATTCTA  2442

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 2443  AGTATTCTTGTTGCACTTAATTAGCCTGTATATCCTCAGAACTTTGTGTAATGCCTGGAGCATAGTAGGCAGTC  2516

Query  787  ----------------------------------------------  786
                                                          
Sbjct 2517  ATATGTTGTATCGTGAATAAATTGCACATAGTAGCTACCCAGCAAA  2562

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