Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04772
• Subject: XM_006541130.3
• Aligned Length: 1104
• Identities: 777
• Gaps: 213

Alignment

Query    1  ATGGCGTCCGAACTTTGTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAG  74
            |||||.||||||.|.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||.||
Sbjct    1  ATGGCATCCGAAATCTGTAAGACGATCTCTGTGGCCAGGCTTGAAAAGCACAAGAATTTGTTCTTAAATTACAG  74

Query   75  GAATCTGCACCATTTTCCATTGGAGTTACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAA  148
            |||||||||||||||||||.|||||||.|||||.||||||||.||||||.||.|||||||.|||||||||||||
Sbjct   75  GAATCTGCACCATTTTCCACTGGAGTTGCTGAAGGATGAGGGGCTGCAGCACCTGGAGAGGCTCTATATGAAAA  148

Query  149  GGAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCA  222
            ||||||||||.|||.||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||
Sbjct  149  GGAACTCCCTCACAACCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGTACCTTCACTCA  222

Query  223  AATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGC  296
            ||||||||||||||||||||.||||||||.|||||.||.||.||||||||.|||||||||||.|||||||||||
Sbjct  223  AATAACATAGTTGTGGTTCCAGAAGCCATCGGGTCCCTCGTGAAACTCCAGTGTCTGGATCTCAGTGACAATGC  296

Query  297  CTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGC  370
            ||||||.||.||||||||||||||.|||.||||||||||.||.||||||||||||||||||||||||||.||.|
Sbjct  297  CTTAGAGATCGTTTGCCCAGAAATCGGTGGTCTGAGAGCGTTGCGTCATCTTCGATTAGCTAATAACCAGCTAC  370

Query  371  AATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACT  444
            |.||||||||||||                                                            
Sbjct  371  AGTTCCTACCTCCA------------------------------------------------------------  384

Query  445  TTACCCGAGAGGCTTCACATGTGCCTTTCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCC  518
                                                                                      
Sbjct  385  --------------------------------------------------------------------------  384

Query  519  GCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTG  592
                                                                                     |
Sbjct  385  -------------------------------------------------------------------------G  385

Query  593  ATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTAT  666
            ||||||||||.||.||||||||.|||||.||.||.||||||||||||||.||.|||||.|||.||||.||.||.
Sbjct  386  ATTTAGGTCGCTCCCGAGAACTGCAGTACGTGTATGTGGATAACAACATCCAGCTGAAGGGCCTGCCCTCATAC  459

Query  667  CTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTT  740
            ||.|||||.|||||||||||.||||..||||||||....|||||.|||.|.||.|||||||.||||||..|.||
Sbjct  460  CTCTACAACAAAGTCATCGGCTGCAACGGCTGTGGCATCCCCATCCAATTGTCAGAGGTGAGGCTGCTGACATT  533

Query  741  TTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCC  814
            ||||||.|||||||..||.||.|||||||||||.|||||||||.|.|||||.||.|||.|.|||||.|||||.|
Sbjct  534  TTCATCTGGGCAGCTGACAGTCTTCCTCCCAGCAGAGGTGAAGACAATAGGCACAGAGAAGGATCATGTCCTGC  607

Query  815  CTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCT---GAAAGATTTGAACTTTCTG  885
            |||||||.|||.||.|.|||.|..|.||.||.|..|||||||||.|   |||   |||||||.||||||||.||
Sbjct  608  CTCTGCAAGAACTGACCATGCGGAGTCTCTACCGCACCTACCACGG---GCTTTGGAAAGATCTGAACTTTTTG  678

Query  886  TCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGA  959
            |||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|.|||||||||
Sbjct  679  TCTCCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGCCCCCTGGGGCACTGTCACCTGTGTAGTGA  752

Query  960  GCCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGA  1033
            |||.|||||||||.|||||||.||.|||.||||.|||||||||||||||||.||||||||.|||||||||.|||
Sbjct  753  GCCCATGTTTACCTTCGTCTATCCTAAGATCTTCCCCTTGAGAGAGACGCCGATGGCAGGCCTGCACCAGAGGA  826

Query 1034  AGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT  1101
            .|||||.|.||.|.||.|||||||||||||||||||||||||||||||.|||||||.||||||||.||
Sbjct  827  GGACAAGTATTGGCTTCGTGGCTTACTGCTGCTCCACCCAGTGTCTGCGGACTTTTAACCTGCTGTGT  894