Nucleotide Global Alignment

Description

• Query: ccsbBroad304_04898
• Subject: XM_011535471.2
• Aligned Length: 801
• Identities: 447
• Gaps: 315

Alignment

Query   1  ATGGTGGCAGAAAAAGAGACCCTGAGCTTAAACAAATGCCCAGACAAGATGCCGAAGAGGACCAAGCTGCTGGC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  ATGGTGGCAGAAAAAGAGACCCTGAGCTTAAACAAATGCCCAGACAAGATGCCGAAGAGGACCAAGCTGCTGGC  74

Query  75  ACAACAGCCGCTCCCGGTGCACCAGCCTCACTCTCTGGTTTCTGAGGGTTTCACAGTCAAAGCCATGATGAAAA  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  ACAACAGCCGCTCCCGGTGCACCAGCCTCACTCTCTGGTTTCTGAGGGTTTCACAGTCAAAGCCATGATGAAAA  148

Query 149  ACTCAGTCGTGAGAGGCCCTCCAGCTGCAGGGGCATTTAAAGAAAGACCAACCAAGCCCACAGCATTTCGAAAA  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149  ACTCAGTCGTGAGAGGCCCTCCAGCTGCAGGGGCATTTAAAGAAAGACCAACCAAGCCCACAGCATTTCGAAAA  222

Query 223  TTCTATGAGCGAGGTGACTTCCCAATTGCCCTTGAGCATGATTCGAAAGGAAACAAAATCGCCTGGAAG-GTAG  295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.||
Sbjct 223  TTCTATGAGCGAGGTGACTTCCCAATTGCCCTTGAGCATGATTCGAAAGGAAACAAAATCGCCTGGAAGTGGAG  296

Query 296  AAATTGAGAAGCTGGATTACCATCATTATCTGCCTCTGTTTTTTGATGGGCTTTGTGAAATGACATTTCCCTAT  369
               .||||||      .||||.|    ||.|||||                                    |.
Sbjct 297  ----GGAGAAG------AACCACC----TCAGCCTC------------------------------------AG  320

Query 370  GAGTTTTTTGCTCGG---------CAAGGAATCCACGACATGCTGGAACACGGTGGGAACAAGATCCTACCTGT  434
           |||      .|||||         ||..||| ||||..||..||               ||.||.||      |
Sbjct 321  GAG------CCTCGGCCCACACCCCAGAGAA-CCACCTCAGCCT---------------CAGGAGCC------T  366

Query 435  CCTTCCACAGCTCATTATCCCGATAAAAAATGCCTTGAACCTCCGAAACCGACAGGTCATCTGTGTCACTCTCA  508
           |...|||||.|       ||.||.||          |||||.||                     |||..||||
Sbjct 367  CGGCCCACACC-------CCAGAGAA----------GAACCACC---------------------TCAGCCTCA  402

Query 509  AGGTCCT----CCAGCATCTGGTTGTGTCAGCTGAGATGGTGGGCAAGGCCTTGGTGCCTTATTACCGTCAAAT  578
           ||..|||    ||| ||           |..|.||||.|      ||  ||             ||| ||  |.
Sbjct 403  AGAGCCTCGGCCCA-CA-----------CCCCGGAGAAG------AA--CC-------------ACC-TC--AG  440

Query 579  CCTC-----CCT--GTCCTGAACATCTTTAAGAATATGAATGTGAACTCCGGAGACGGCATTGACTACAGCCAG  645
           ||||     |||  |.||   |||||                      |||||||        ||.|| |.|||
Sbjct 441  CCTCAGGAGCCTCGGCCC---ACATC----------------------CCGGAGA--------ACCAC-GTCAG  480

Query 646  CAGAAGAGGGAGAACATTGGGGACTTGATCCAGGAG---------ACACTGGAGGCCTTCGAGCGCTACGGAGG  710
           |                      ||     ||||||         ||||      ||.||.|.|.|.||     
Sbjct 481  C----------------------CT-----CAGGAGCCTCGGCCCACAC------CCCTCTACCTCCAC-----  516

Query 711  AGAAAATGCCTTTATCAACATTAAGTACGTGGTCCCAACCTACGAGTCTTGCTTGCTAAAC  771
                                                                        
Sbjct 517  -------------------------------------------------------------  516