Nucleotide Global Alignment

Description

• Query: ccsbBroad304_05463
• Subject: XM_005263656.4
• Aligned Length: 1273
• Identities: 854
• Gaps: 419

Alignment

Query    1  ATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATATGTCTACTGGTCCCATAGCAGAAAGCTGGTGTTACAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACAGGTTAAAGTAGTAAAATTTTCCTATATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAGGAAATGGGTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAGTGTTAAAAAGTTCAACATTTTCATCTGGCCCAAGTGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGATTAGATGATGAAAGTAAAGACTACTTGTCCTTATATTTGCTTTTAGTCAGCTGCCCCAAAAGTGAAGTTCG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGCAAAATTCAAATTTTCCCTTCTGAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATC  370
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------ATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATC  48

Query  371  GATTTGTGCAAGGGAAGGACTGGGGTTTTAAAAAATTCATTAGAAGGGACTTTTTGCTTGATGAAGCTAATGGT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   49  GATTTGTGCAAGGGAAGGACTGGGGTTTTAAAAAATTCATTAGAAGGGACTTTTTGCTTGATGAAGCTAATGGT  122

Query  445  CTTTTACCAGATGACAAGCTTACATTATTTTGTG----------------------------------------  478
            ||||||||||||||||||||||||||||||||||                                        
Sbjct  123  CTTTTACCAGATGACAAGCTTACATTATTTTGTGAGAATCTCCAGCACTGCTTGCAGAAGAGGAGGAAGCATTG  196

Query  479  ---------------------------------------------------------AGGTGAGTGTGGTCCAA  495
                                                                     |||||||||||||||||
Sbjct  197  CACTACCCTTCCTAAAGAACTGCCTCCTCCCCCTCCCCTGCAAGTGGTGCTGTAGACAGGTGAGTGTGGTCCAA  270

Query  496  GATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGCAGAAGATTT  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  271  GATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGCAGAAGATTT  344

Query  570  AGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTCATA  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  345  AGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTCATA  418

Query  644  AATCTGTGCTTGCAGCTCGATCTCCAGTTTTTAACGCCATGTTTGAACATGAAATGGAAGAAAGCAAAAAGAAT  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  AATCTGTGCTTGCAGCTCGATCTCCAGTTTTTAACGCCATGTTTGAACATGAAATGGAAGAAAGCAAAAAGAAT  492

Query  718  CGAGTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGATTCATTTACACAGGGAGAGCACC  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  493  CGAGTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGATTCATTTACACAGGGAGAGCACC  566

Query  792  AAACCTTGACAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGT  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  567  AAACCTTGACAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGT  640

Query  866  GCGAAGAAGCTTTGTGTAGTAACCTCTCAGTAGAGAATGTTGCAGATACCCTTGTCCTTGCAGATTTGCACAGT  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  641  GCGAAGAAGCTTTGTGTAGTAACCTCTCAGTAGAGAATGTTGCAGATACCCTTGTCCTTGCAGATTTGCACAGT  714

Query  940  GCAGAACAGTTGAAAGCACAAGCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAACTTGGGTGTAAAGA  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  715  GCAGAACAGTTGAAAGCACAAGCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAACTTGGGTGTAAAGA  788

Query 1014  TGGGAAAAACTGGAACAGCAACCAAGCAACCGACATAATGGAAACATCAGGGTGGAAGTCCATGATTCAGTCTC  1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  789  TGGGAAAAACTGGAACAGCAACCAAGCAACCGACATAATGGAAACATCAGGGTGGAAGTCCATGATTCAGTCTC  862

Query 1088  ACCCTCATTTAGTAGCAGAAGCCTTTCGAGCACTAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAA  1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  863  ACCCTCATTTAGTAGCAGAAGCCTTTCGAGCACTAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAA  936

Query 1162  CGGCTAAAACAGTCC  1176
            |||||||||||||||
Sbjct  937  CGGCTAAAACAGTCC  951