Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06153
- Subject:
- NR_073112.2
- Aligned Length:
- 2476
- Identities:
- 1132
- Gaps:
- 1343
Alignment
Query 1 ------------------------------------------------------------ATGGAGCAGCTGAA 14
|||||||||||||.
Sbjct 1 CCTGACCTCGCACCCAGCTCGGAGCCCGGAGCGTGCCTCGGCGGCCTGTCGGTTTTCACCATGGAGCAGCTGAG 74
Query 15 CTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCA 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCA 148
Query 89 TCTCTCCCTTCAGCATTTCATCTGCTATGGCCATGGTTTTTCTGGGGACCAGAGGTAACACGGCAGCACAGCTG 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTCTCCCTTCAGCATTTCATCTGCTATGGCCATGGTTTTTCTGGGGACCAGAGGTAACACGGCAGCACAGCTG 222
Query 163 TCCAAGACTTTCCATTTCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAA 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCCAAGACTTTCCATTTCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAA 296
Query 237 ACGTGGAGCGTCTTATATTCTGAAACTTGCTAATAGATTATATGGAGAGAAAACTTACAATTTCCTTCCTGAGT 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACGTGGAGCGTCTTATATTCTGAAACTTGCTAATAGATTATATGGAGAGAAAACTTACAATTTCCTTCCTGAGT 370
Query 311 TCTTGGTTTCGACTCAGAAAACATATGGTGCTGACCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGATGCA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTTGGTTTCGACTCAGAAAACATATGGTGCTGACCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGATGCA 444
Query 385 AGGAAGACCATAAACCAGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGT 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGAAGACCATAAACCAGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGT 518
Query 459 TGATAACATGACCAAACTTGTGCTAGTAAATGCCATCTATTTCAAGGGAAACTGGAAGGATAAATTCATGAAAG 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATAACATGACCAAACTTGTGCTAGTAAATGCCATCTATTTCAAGGGAAACTGGAAGGATAAATTCATGAAAG 592
Query 533 AAGCCACGACGAATGCACCATTCAGATTGAATAAGAAAGACAGAAAAACTGTGAAAATGATGTATCAGAAGAAA 606
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGCCACGACGAATGCACCATTCAGATTGAAT----AAGACAGAAAAACTGTGAAAATGATGTATCAGAAGAAA 662
Query 607 AAATTTGCATATGGCTACATCGAGGACCTTAAGTGCCGTGTGCTGGAACTGCCTTACCAAGGCGAGGAGCTCAG 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 AAATTTGCATATGGCTACATCGAGGACCTTAAGTGCCGTGTGCTGGAACTGCCTTACCAAGGCGAGGAGCTCAG 736
Query 681 CATGGTCATCCTGCTGCCGGATGACATTGAGGACGAGTCCACGGGCCTGAAGAAGATTGAGGAACAGTTGACTT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 CATGGTCATCCTGCTGCCGGATGACATTGAGGACGAGTCCACGGGCCTGAAGAAGATTGAGGAACAGTTGACTT 810
Query 755 TGGAAAAGTTGCATGAGTGGACTAAACCTGAGAATCTCGATTTCATTGAAGTTAATGTCAGCTTGCCCAGGTTC 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 TGGAAAAGTTGCATGAGTGGACTAAACCTGAGAATCTCGATTTCATTGAAGTTAATGTCAGCTTGCCCAGGTTC 884
Query 829 AAACTGGAAGAGAGTTACACTCTCAACTCCGACCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAA 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 AAACTGGAAGAGAGTTACACTCTCAACTCCGACCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAA 958
Query 903 GGCTGATCTGTCTGGCATGTCAGGAGCCAGAGATATTTTTATATCAAAAATTGTCCACAAGTCATTTGTGGAAG 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GGCTGATCTGTCTGGCATGTCAGGAGCCAGAGATATTTTTATATCAAAAATTGTCCACAAGTCATTTGTGGAAG 1032
Query 977 TGAATGAAGAGGGAACAGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 TGAATGAAGAGGGAACAGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAA 1106
Query 1051 AATTTCACTGCCGACCATCCATTCCTTTTCTTTATTCGGCATAATTCCTCAGGTAGCATCCTATTCTTGGGGAG 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 AATTTCACTGCCGACCATCCATTCCTTTTCTTTATTCGGCATAATTCCTCAGGTAGCATCCTATTCTTGGGGAG 1180
Query 1125 ATTTTCTTCCCCT------------------------------------------------------------- 1137
|||||||||||||
Sbjct 1181 ATTTTCTTCCCCTTAGAAGAAAGAGACTGTAGCAATACAAAAATCAAGCTTAGTGCTTTATTACCTGAGTTTTT 1254
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1255 AATAGAGCCAATATGTCTTATATCTTTACCAATAAAACCACTGTTCAGAAACAAGTCTTTCATTTTCTTTGTAA 1328
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1329 GTTTGGCTCTGTTGGCTGTTTACACCCATGAATTTTGGCATGGGTATCTATTTTTCTTTTTTACATTGAAAAAA 1402
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1403 ATCCAGTGGTTGCTTTTGAATGCATCAAGTAAAGAAGAAGAAAAGAATACATCCGATGCGTAGATTCTTGACCA 1476
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1477 TGTAGTAATCTATAAAATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTATTTTGC 1550
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1551 AGTTAGAATTTTGGAAGCCACAAAATAGACAGACACCCTGACTGTTGAAGGGAGGTTTAAAAACAGATATTCAA 1624
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1625 TTGAAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTC 1698
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1699 CCTTGTTCTGCAGGATTAGTATTCTGTTACAGACCTCTAGTTTTTAGACTCTTCAATTAAAGGGCCAATGGTTA 1772
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1773 TAACCTGCATTCCCTTTTTTGTTCTTCTTTATGTATAATATATAGTTCATGTGGCGCTGCATGAAATCAAGAAG 1846
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1847 TGGGTGTCTTAGGATAAAAGATACCAAGAGTCTACAAAAATAACCATGTAGTAAGATAAACTGCTGAACAAAGG 1920
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1921 TTTTACTGTTAGCCACCTTCTCATGTGTTTTCTTTTCTCTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTT 1994
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 1995 TTTGAGACAGAGTCTTGCTCTGTTACCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACCGCAACCTCTGCC 2068
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2069 TCCTGGGTTCAAGTGATTCTCTTGCTTCAGCCTCCTGAGTAGCTGGGATTATAGGCATGCACCACTAGGCCTGG 2142
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2143 CTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTTCCATGTTGGCCAGGCTGGTCCCGAACTCCTGACCTCAGG 2216
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2217 TGATCCGCGCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCATGCCTGGCCTTCTCATGTGT 2290
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2291 TTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGATGGGGTGGGGGCTCTTGGACTGATATAAAACT 2364
Query 1138 -------------------------------------------------------------------------- 1137
Sbjct 2365 TTGTCAAATGTAGTTCTTTGAATGGAGCTTGAAACGCCGCATATTCTTGCTCCCACAAGGATAGTGGGCATCAT 2438
Query 1138 ---------------------------------- 1137
Sbjct 2439 GAATTAATAAAACGTCCTAGGATTCTGCAAGCTA 2472
