Nucleotide Global Alignment

Description

• Query: ccsbBroad304_06753
• Subject: XM_011509851.3
• Aligned Length: 1237
• Identities: 826
• Gaps: 341

Alignment

Query    1  ATGGCGGGACACCTGGCTTCAGATTTTGCCTTCTCGCCCCCTCCAGGTGGTGGAGGTGATGGGCCAGGGGGGCC  74
                                                                      |||...||        
Sbjct    1  ----------------------------------------------------------ATGTCTCA--------  8

Query   75  GGAGCCGGGCTGGGTTGATCCTCGGACCTGGC------TAAGC---------------------------TTCC  115
                   |||||.|..||....||||.||  |      |||||                           ||.|
Sbjct    9  -------GGCTGTGCAGACAAACGGAACT--CAACCATTAAGCAAAACATGGGAACTCAGTTTATATGAGTTAC  73

Query  116  AAGGCCCTCCTGGAGGGCCAGGAATCGGGCCGGGGGTTGGGCCA--------GGCTCTG-AGGTGTGGGGGATT  180
            ||.|..|.|||       |||||                |||.|        ||||..| |..|||||      
Sbjct   74  AACGAACACCT-------CAGGA----------------GGCAATAACAGATGGCTTAGAAATTGTGG------  118

Query  181  CCCCCATGCCCCCCGCCGTAT---GAGTTCTGTGGGGGGATGGCGTACTGTGGGCCCCA----GGTTGGAGTGG  247
                 .|.|.||.||..||.|   .|||         |.||    ||.||||   ||||    |.|||||    
Sbjct  119  -----TTTCACCTCGAAGTCTACACAGT---------GAAT----TAATGTG---CCCAATTTGTTTGGA----  167

Query  248  GGCTAGTGCCCCAAGGCGGCTTGGAGACCTCTCAGCCTGAGGGCGAAGCAGGAG--------TCG---GGGTGG  310
               || ||            |||.|||    .||.|.|||   |.|...|||||        |||   ..|||.
Sbjct  168  ---TA-TG------------TTGAAGA----ACACCATGA---CTACAAAGGAGTGTTTACATCGTTTTTGTGC  218

Query  311  AGAGCAACTCCGATGGGGCCTCCCCGGAGCCCTGCACCGTCAC--CCCTGGTGCCGT-GAAGCTGG------AG  375
            |||                            |||||.|.||||  ||||       | |||| |||      ||
Sbjct  219  AGA----------------------------CTGCATCATCACAGCCCT-------TAGAAG-TGGCAACAAAG  256

Query  376  AA--------------GGAGAAGCTGGAG----CAAAA---CCCGGAGGAGTCCCAGGACATCAAAGCTCTGCA  428
            ||              |.|.||.||  ||    |||||   |.|..|||    ||||   |.|.||.||.||  
Sbjct  257  AATGTCCTACCTGTCGGAAAAAACT--AGTTTCCAAAAGATCACTAAGG----CCAG---ACCCAAACTTTG--  319

Query  429  GAAAGAACTC--GAGCAA---TTTGCCAAGCTC---------CTGAAGC------AGA-AGAGGATCACCCTGG  481
              |.|.||||  .|||||   ||..||||| ||         .||||||      ||| ||||.||.|.||.||
Sbjct  320  --ATGCACTCATCAGCAAAATTTATCCAAG-TCGTGATGAGTATGAAGCTCATCAAGAGAGAGTATTAGCCAGG  390

Query  482  GATATACACAGGC-CGATGTGGGGCTCACCCTGGGGGTTCTATATCAGCAAGCACTCAGTCACAGCATTGAGGA  554
               ||..|||.|| |.||                        .|||||||||||||||||||||||||||||||
Sbjct  391  ---ATCAACAAGCACAAT------------------------AATCAGCAAGCACTCAGTCACAGCATTGAGGA  437

Query  555  AGGACTGAAGATACAGGCCATGAACAGACTGCAGCGAGGCAAGAAACAACAGATTGAAAATGGTAGTGGAGCAG  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  438  AGGACTGAAGATACAGGCCATGAACAGACTGCAGCGAGGCAAGAAACAACAGATTGAAAATGGTAGTGGAGCAG  511

Query  629  AAGATAATGGTGACAGTTCACACTGCAGTAATGCATCCACACATAGCAATCAGGAAGCAGGCCCTAGTAACAAA  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  512  AAGATAATGGTGACAGTTCACACTGCAGTAATGCATCCACACATAGCAATCAGGAAGCAGGCCCTAGTAACAAA  585

Query  703  CGGACCAAAACATCTGATGATTCTGGGCTAGAGCTTGATAATAACAATGCAGCAATGGCAATTGATCCAGTAAT  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  586  CGGACCAAAACATCTGATGATTCTGGGCTAGAGCTTGATAATAACAATGCAGCAATGGCAATTGATCCAGTAAT  659

Query  777  GGATGGTGCTAGTGAAATTGAATTAGTATTCAGGCCTCATCCCACACTTATGGAAAAAGATGACAGTGCACAGA  850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  660  GGATGGTGCTAGTGAAATTGAATTAGTATTCAGGCCTCATCCCACACTTATGGAAAAAGATGACAGTGCACAGA  733

Query  851  CGAGATACATAAAGACTTCTGGTAACGCCACTGTTGATCACTTATCCAAGTATCTGGCTGTGAGGTTAGCTTTA  924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  734  CGAGATACATAAAGACTTCTGGTAACGCCACTGTTGATCACTTATCCAAGTATCTGGCTGTGAGGTTAGCTTTA  807

Query  925  GAAGAACTTCGAAGCAAAGGTGAATCAAACCAGATGAACCTTGATACAGCCAGTGAGAAGCAGTATACCATTTA  998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  808  GAAGAACTTCGAAGCAAAGGTGAATCAAACCAGATGAACCTTGATACAGCCAGTGAGAAGCAGTATACCATTTA  881

Query  999  TATAGCAACAGCCAGTGGCCAGTTCACTGTATTAAATGGCTCTTTTTCTTTGGAATTGGTCAGTGAGAAATACT  1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  882  TATAGCAACAGCCAGTGGCCAGTTCACTGTATTAAATGGCTCTTTTTCTTTGGAATTGGTCAGTGAGAAATACT  955

Query 1073  GGAAAGTGAACAAACCCATGGAACTTTATTACGCACCTACAAAGGAGCACAAA  1125
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  956  GGAAAGTGAACAAACCCATGGAACTTTATTACGCACCTACAAAGGAGCACAAA  1008