Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_06884
- Subject:
- NR_029406.1
- Aligned Length:
- 2261
- Identities:
- 425
- Gaps:
- 1798
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATATCTCGTCATGGACTGTGCCCCGCTCGAGCCTCTCCACATGCAGCCGGAAGGAAAGTGGAGGGAGCTGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTCCGTAGCCGGGGTGCCCACCCCAACCAGGCTGCCTCTGCCACCCAAGACAGAGGTTCTCTGATAATAATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGGGGCTTGTTTCCAGAGACCACACCTGAAGCTGCCAACTCCCCGGAGGGAAGGTCCTGATTAATGGCCGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAATTTCTCCTTAAGGCCCTGAAACTGCCTACTCAGAACCAAGCCAGTTTTTCCTGCCTGTCCTGTTTGGGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGAGGAGGCAGCTAGAAACCCATTATGCAGGGGATGGGGACCAAACCAATGCACAACTCCTACGTACTGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGTCTTACGTTTCCCTAAGTTTCTGCCGACTAAACTGTGCACACGTTCTCAGGACCTCCTGAAGCTGCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGCGCTGATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCACTGGGAATTGTGATCCAAAGCTTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGATGAGGTACAAAGTTGGAGAAACAAAACGCAAACTAAGCAACAATGAAACAGAACAGAGTGAATCTGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGCTCAAGAGAGGACGTAGCTGCCCCCACCCCGCATCCCTGGGCTCGGGTTTGCCTTGCTGACCTCTGCTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCTGGTGCCGCACAGAGAAACTGAGGAGAAACCACATCAGTCTCCTTCAGCCTCAGCTTCACATCTGTGGGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCAACCCTTTCAGAAGCTGTATAATGTGGGAAAGCTTTCCTCTCAGGAAAATGCACACATCCAACTTTGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGATGCCCTTGGGGGTGCTTCAAGGATCCTAGATAATAACCCCCTTTCCCGAACATCCAAGAACCTAAGTTTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTTTTTTTTTGAGAAAGTCTCGCTCTCTCTCCCATTCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCACCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCTGCCACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATCGTCTTGATCTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCTGGTCCAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCCAACTTTTAGATCTAGAGTGATGTCAGCATGACATTGATTTCCTGAGGCCCAGGGGTGAAGGAGCTGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGCAGAGGGGTGAAGGAAGTCAGCTACAGACAGCAGCAGCTGATGCACAGGCCTCCCAGCGCCTGAAGTCAC 1332
Query 1 -------------------------------------------ATGGCGCCGAAAGCGAAGAAGGAAGCTCCTG 31
|||||.||.||||| ||||||||||||||
Sbjct 1333 CCGGAATTGGGAAGTGCTCAGAAGCTTACAAAGCTGCCTCGAGATGGCACCAAAAGC---GAAGGAAGCTCCTG 1403
Query 32 CCCCTCCTAAAGCTGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCACAGCCAC 105
|.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 1404 CTCCTCCTAAAGCCGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGCAGCCAC 1477
Query 106 A---AAAAGAAGAAGATCCGCACGTCACCCACCTTCCGGCGGCCGAAGACACTGCGACTCCGGAGACAGCCCAA 176
| |||| |||||||||||||.|||||.|||||||.|||||||.||||||||||||||||||||.|||||||.
Sbjct 1478 ACGCAAAA-AAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAGCCCAG 1550
Query 177 ATATCCTCGGAAGAGCGCTCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCGCTGACCACTG 250
|||||||||||||||..|.||||.||||||||||||||.||||||||||||||||||||||||||||.||||||
Sbjct 1551 ATATCCTCGGAAGAGTACCCCCACGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGGCCACTG 1624
Query 251 AGTCTGCCATGAAGAAGATAGAAGACAACAACACACTTGTGTTCATTGTGGATGTTAAAGCCAACAAGCACCAG 324
||||.|||.||||||||||||||||.||||||||.||||||||||.||||||||||||||||||||||||||||
Sbjct 1625 AGTCGGCCGTGAAGAAGATAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAG 1698
Query 325 ATTAAACAGGCTGTGAAGAAGCTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTGATGGAGA 398
||.|.||||||||||||||||.|.|||||||.|||||||||||||||||.||||||||||.|.||||||..|||
Sbjct 1699 ATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGATAAAGA 1772
Query 399 GAAGAAGGCATATGTTCGACTGGCTCCTGATTACGATGCTTTGGATGTTGCCAACAAAATTGGAATCATC---- 468
|||||||||||||||||||||.|||||||||||.||||||||.||||||| .|||||||||||.||||.|
Sbjct 1773 GAAGAAGGCATATGTTCGACTTGCTCCTGATTATGATGCTTTCGATGTTG-TAACAAAATTGGGATCACCTAAA 1845
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1846 CTGAGTCCAGCTGGCTAACTCTAAATATATGTGTATCTTTTCAGCATAAAAAAATAATGTTTTTCATAAGAATG 1919
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1920 ACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTATGTTTCTAGTAAGTATAATATTAGCTTATTTGA 1993
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1994 CTAGAACTCAAGCAGAATAGGAATTTATGCTTGTTTTATATTCAATAATAATTTTGAAGATACAGTTGTTTTAT 2067
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2068 TACACCAAAAATACTATATTAATCTTATTTAACTAAGTTTTATCCAAATCATGTTAACTTAAGAAACATTTGAT 2141
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2142 CAGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGCTTATTTTTTTCCAAGCCAAGTTAGAAT 2215
Query 469 ----------------------------------------- 468
Sbjct 2216 AGAGCACTTTTAGAGGATTTCATAAATGAATTTTGCAATGC 2256
