Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_07670
- Subject:
- XM_017012197.2
- Aligned Length:
- 3702
- Identities:
- 488
- Gaps:
- 3174
Alignment
Query 1 ATGTCTTCCCCGTTGCAAAGAGCTGTGGGAGATACCAAGAGGGCCTTTTCTGCATCTTCTAGTTCCTCTGCCAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCTACCCTTTGATGACAGGGACTCAAACCATCCCTCAGAGGGGAATGGCGACTCTTTGTTAGCTGATGAAGACA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTGACTTTGAAGACAGCTTGAATCGCAATGTGAAGAAGAGAGCAGCAAAACGACCACCGAAAACAACACCGGTG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GCAAAACATCCAAAGAAAGGGTCCCGAGTGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TCTTTTCAATGCTGTGAAAGCCGCCAAAAGTGACATGCAGTCTTTGGTAGATGAGTGGCTGGATAGCTACAAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAGACCAGGATGCAGGATTTCTGGAGCTTGTTAACTTTTTCATCCAATCTTGCGGATGTAAAGGCATTGTGACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCTGAGATGTTCAAGAAGATGTCCAACTCAGAGATCATCCAGCACCTAACAGAGCAGTTTAATGAGGACTCGGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGACTACCCTCTCATAGCTCCAGGTCCATCCTGGAAGAAGTTCCAGGGCAGCTTCTGTGAATTTGTGAGGACAT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TGGTCTGTCAGTGCCAGTACAGCCTCCTCTATGATGGCTTCCCTATGGACGACCTCATCTCCCTGCTCACTGGC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CTCTCAGACTCACAAGTCCGCGCCTTCCGTCACACTAGCACCCTGGCTGCTATGAAACTGATGACCTCCCTGGT 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 AAAAGTTGCCCTCCAACTGAGTGTGCACCAAGATAACAATCAGCGTCAGTATGAGGCTGAAAGAAACAAGGGGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CAGGGCAGAGGGCACCTGAGCGGCTGGAGAGCCTGTTGGAGAAACGCAAAGAGCTCCAAGAGCATCAAGAGGAG 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ATTGAGGGGATGATGAATGCCCTCTTCAGGGGTGTCTTTGTTCATCG------------------GTACAGGGA 944
||||| ||.||||..|.|| || .|.||||||
Sbjct 1 ---------ATGAT-------CTTTTCAATGCTG-----------CGAAAGCTGCCAAAAGTGACATGCAGGGA 47
Query 945 TGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCC 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 48 TGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCC 121
Query 1019 TCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCCTGAAGTGTGTG 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||
Sbjct 122 TCACCGACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTG 195
Query 1093 AAGGCCCTGAAAGGGCTGTACGGTAACCGGGACCTGACCACACGCCTGGAGCTCTTCACCAGCCGCTTCAAGGA 1166
|||||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||..|||||||||||||
Sbjct 196 AAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGA 269
Query 1167 CCGGATGGTTTCCATGGTCATGGACAGAGAGTATGATGTGGCAGTGGAGGCTGTCAGATTACTGATACTTATCC 1240
|.||||||||||||||.||||||||||||||||...|||||||||||||||.||||||||||||||||||||||
Sbjct 270 CTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCC 343
Query 1241 TTAAGAACATGGAAGGGGTGCTGACGGACGCGGATTGTGAGAGCGTCTACCCCGTTGTGTATGCCTCTCATCGA 1314
||
Sbjct 344 TT------------------------------------------------------------------------ 345
Query 1315 GGCCTGGCCTCTGCCGCAGGCGAATTTCTGTACTGGAAACTCTTCTACCCTGAGTGCGAGATAAGAATGATGGG 1388
|||||.|||||||||||||||||||||||||.||||||
Sbjct 346 ------------------------------------AAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGG 383
Query 1389 TGGAAGAGAGCAACGCCAGAGCCCAGGCGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGA 1462
|||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGA 457
Query 1463 GC--GAGCTCCATGACCACGCTGCTTACTTAGTAGACAGTCTGTGGGACTGTGCAGGGGCTCGGCTGAAGGA-- 1532
|| |||..|.||||| |.|||
Sbjct 458 GCAAGAGTGCGATGAC---------------------------------------------------ATGGATC 480
Query 1533 CTGGGAGGGTCTGACAAGCCTGCTGCTGGAGAAGGACCAGAACCTGGGTGATGTGCAGGAGAGCACACTGATAG 1606
||| |.|||||.|| ||..| |||.| |.|||| ||||
Sbjct 481 CTG-------CGGACAAACC-GCCCC------AGGGC--GTACCT----------------AGCA--------- 513
Query 1607 AAATCCTTGTGTCCAGTGCCCGGCAAGCTTCAGAGGGGCACCCGCCTGTGGG---CCGGGTC--ACTGGGAGGA 1675
||| ||||.|||| .||||..|.|| ||.|.|| .||.|||
Sbjct 514 -------------------CCG--AAGCATCAG--------GCGCCACTAGGTCTCCAGCTCCTTCTCGGA--- 555
Query 1676 AGGGCTTAACCTCTAAGGAGCGCAAGACCCAAGCCGATGACAGGGTGAAGTTGACTGAGCACCTCATCCCCCTG 1749
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1750 CTGCCCCAGCTCCTGGCCAAGTTCTCAGCTGATGCAGAGAAGGTCACTCCCCTGCTCCAGCTTCTCAGCTGCTT 1823
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1824 TGACCTCCACATCTACTGCACTGGGCGCTTGGAGAAGCACCTGGAGCTGTTCCTGCAGCAACTCCAGGAGGTGG 1897
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1898 TGGTGAAGCATGCAGAGCCAGCGGTGCTTGAGGCTGGGGCGCATGCCCTCTACCTGCTCTGTAATCCCGAATTC 1971
Sbjct 556 -------------------------------------------------------------------------- 555
Query 1972 ACTTTCTTCAGCCGGGCGGACTTTGCCCGCAGCCAGCTAGTAGATTTGCTGACTGACCGCTTCCAGCAGGAGCT 2045
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2046 TGAAGAGCTGTTACAGTCGTCCTTCCTAGATGAGGATGAGGTATATAATCTGGCAGCCACTCTGAAACGCCTCT 2119
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2120 CTGCCTTCTACAACACTCATGACCTGACTCGCTGGGAGCTCTATGAGCCATGTTGCCAACTCCTGCAGAAGGCT 2193
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2194 GTGGACACAGGAGAGGTTCCTCACCAGGTTATCCTGCCAGCCTTGACTCTTGTCTATTTTTCCATTCTCTGGAC 2267
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2268 ACTAACCCACATTTCTAAATCAGATGCTTCCCAGAAGCAGCTGTCGAGTTTGAGGGACAGAATGGTGGCCTTCT 2341
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2342 GTGAACTCTGCCAGAGTTGCCTCTCAGATGTGGATACTGAGATCCAGGAGCAGGCTTTTGTCTTATTAAGTGAT 2415
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2416 CTACTTCTCATCTTTAGCCCTCAGATGATTGTTGGGGGCCGTGATTTCCTTAGGCCACTTGTCTTTTTTCCTGA 2489
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2490 AGCTACTCTCCAGTCTGAGCTAGCCAGCTTCCTCATGGACCACGTCTTCATCCAGCCGGGAGACCTGGGCAGTG 2563
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2564 GTGATTCCCAGGAGGATCATTTACAGATAGAGCGGCTACACCAGCGGCGCCGCCTCCTAGCCGGGTTCTGCAAG 2637
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2638 CTGTTGCTTTATGGGGTGCTGGAGATGGATGCAGCCTCAGATGTTTTCAAACACTACAACAAGTTCTACAATGA 2711
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2712 CTATGGTGACATTATCAAGGAAACATTAACTAGAGCAAGGCAGATTGACCGAAGTCATTGTTCCCGAATCCTGC 2785
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2786 TGCTGAGCCTCAAGCAGCTGTACACAGAACTGCTGCAGGAGCATGGGCCCCAGGGCCTGAATGAGCTTCCTGCC 2859
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2860 TTCATCGAGATGAGGGACCTGGCCCGGAGGTTTGCCTTGAGTTTTGGACCCCAGCAGCTGCAGAACCGTGACCT 2933
Sbjct 556 -------------------------------------------------------------------------- 555
Query 2934 CGTGGTCATGCTACACAAGGAAGGCATCCAGTTCTCCTTGTCTGAGCTTCCTCCAGCTGGCTCCTCCAATCAGC 3007
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3008 CTCCAAATCTGGCATTCCTGGAGCTCCTTTCAGAGTTTTCCCCCCGACTCTTCCATCAGGACAAGCAGCTTTTA 3081
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3082 CTGTCCTATCTAGAAAAGTGCCTGCAGCATGTCTCCCAGGCACCTGGCCATCCCTGGGGCCCAGTCACCACCTA 3155
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3156 CTGCCACTCCCTCAGCCCTGTGGAGAACACAGCAGAGACCAGCCCTCAGGTCCTCCCCAGCTCCAAGAGGAGGC 3229
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3230 GCGTTGAAGGGCCTGCCAAGCCTAACAGAGAGGACGTCTCCTCGTCCCAGGAAGAAAGTCTGCAGCTGAACAGC 3303
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3304 ATCCCGCCCACGCCCACCCTCACCTCCACAGCTGTGAAGAGCAGGCAGCCCCTGTGGGGGTTGAAAGAGATGGA 3377
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3378 GGAAGAAGATGGCTCAGAGTTGGATTTTGCCCAGGGTCAGCCCGTCGCAGGCACCGAGAGGTCAAGGTTCTTGG 3451
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3452 GTCCACAATATTTCCAGACTCCACACAACCCTTCAGGTCCTGGCCTGGGCAACCAGCTGATGCGACTCAGCCTT 3525
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3526 ATGGAAGAGGACGAGGAAGAAGAGTTAGAAATCCAGGATGAGTCAAATGAAGAACGGCAGGATACAGACATGCA 3599
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3600 AGCAAGTAGCTACTCTTCCACCAGTGAGCGCGGGCTGGACCTCTTAGATTCTACAGAGCTGGATATTGAGGATT 3673
Sbjct 556 -------------------------------------------------------------------------- 555
Query 3674 TC 3675
Sbjct 556 -- 555
