Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09483
• Subject: XM_011249305.2
• Aligned Length: 1062
• Identities: 675
• Gaps: 333

Alignment

Query    1  ATGGANGCAAATGGGAGCCAAGGCACCTCGGGCAGCGCCAACGACTCCCAGCACGACCCCGGTAAAATGTTTAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CGGTGGACTGAGCTGGCAGACCTCACCAGATAGCCTTAGAGACTATTTTAGCAAATTTGGAGAAATTAGAGAAT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GTATGGTCATGAGAGATCCCACTACGAAACGCTCCAGAGGCTTCGGTTTCGTCACGTTCGCAGACCCAGCAAGT  222
              ||||.|.|              ||..||      ||||.|             |||.|.|||..|.||   |
Sbjct    1  --ATGGCCCT--------------CGGGAC------GAGGGT-------------GTTGGGAGATGCTGC---T  36

Query  223  GTAGATAAAGTATTAGGTCAGCCCCACCATGAGTTAGATTCCAAGACGATTGACCCCAAAGTTGCATTTCCTCG  296
            ||                        ||.||    .|||.|         ||.|        ||          
Sbjct   37  GT------------------------CCTTG----GGATGC---------TGTC--------TG----------  55

Query  297  TCGAGCGCAACCCAAGATGGTCACGAGAACAAAGAAAATATTTGTAGGCGGGTTATCTGCGAACACAGTAGTGG  370
                          ||||||||||.||||||||||||||.||.|||||.||.||.|||||.|||||||||||||
Sbjct   56  --------------AGATGGTCACAAGAACAAAGAAAATCTTCGTAGGAGGATTGTCTGCAAACACAGTAGTGG  115

Query  371  AAGATGTAAAGCAATATTTCGAGCAGTTTGGCAAGGTGGAAGATGCAATGCTGATGTTTGATAAAACTACCAAC  444
            |||||||||||||.|||||||||||||||||||||||.||.|||||.|||||||||||.||.|||||.||||||
Sbjct  116  AAGATGTAAAGCAGTATTTCGAGCAGTTTGGCAAGGTAGAGGATGCGATGCTGATGTTCGACAAAACCACCAAC  189

Query  445  AGGCACAGAGGGTTTGGCTTTGTCACTTTTGAGAATGAAGATGTTGTGGAGAAAGTCTGTGAGATTCATTTCCA  518
            ||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct  190  AGGCACAGAGGGTTTGGCTTTGTCACCTTTGAGAATGAAGACGTTGTGGAGAAAGTCTGTGAGATTCATTTCCA  263

Query  519  TGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  264  TGAAATCAATAATAAAATGGTAGAATGTAAGAAAGCTCAGCCGAAAGAAGTCATGTTCCCACCTGGGACAAGAG  337

Query  593  GCCGGGCCCGGGGACTGCCTTACACCATGGACGCGTTCATGCTTGGCATGGGGATGCTGGGATATCCCAACTTC  666
            |||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||||.||.||||||||.
Sbjct  338  GCCGGGCCCGGGGGCTGCCATACACCATGGATGCGTTCATGCTTGGCATGGGGATGCTGGGCTACCCCAACTTT  411

Query  667  GTGGCGACCTATGGCCGTGGCTACCCCGGATTTGCTCCAAGCTATGGCTATCAGTTCCCAG-------------  727
            |||||.|||||||||.|.||||||||||||||||||||.|||||||||||.||||||||||             
Sbjct  412  GTGGCAACCTATGGCAGAGGCTACCCCGGATTTGCTCCTAGCTATGGCTACCAGTTCCCAGCCCTATTACCATA  485

Query  728  -----------GCTTCCCAGCAGCGGCTTATGGACCAGTGGCAGCAGCGGCGGTGGCGGCAGCAAGAGGAT---  787
                       |||||||.||.||.||||||||||||||||||||.||.||.|||||.||.||..||||||   
Sbjct  486  TTTAAATGCAAGCTTCCCGGCGGCAGCTTATGGACCAGTGGCAGCGGCAGCTGTGGCAGCGGCTCGAGGATCAG  559

Query  788  ---------------------------------------------------CAGGCTCCAACCCGGCGCGGCCC  810
                                                               |||||||||||||||||||||||
Sbjct  560  TCCTGAATAGCTACAGTGCTCAACCGAATTTTGGCGCGCCCGCTTCCCCGGCAGGCTCCAACCCGGCGCGGCCC  633

Query  811  GGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGT  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  634  GGAGGCTTCCCGGGGGCCAACAGCCCAGGACCTGTCGCCGATCTCTACGGCCCTGCCAGCCAGGACTCCGGAGT  707

Query  885  GGGGAATTACATAAGTGCGGCCAGCCCACAGCCGGGCTCGGGCTTCGGCCACGGCATAGCTGGACCTTTGATTG  958
            |||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct  708  GGGGAATTACATAAGCGCGGCCAGCCCACAGCCGGGCTCCGGCTTCGGCCACGGCATAGCTGGACCTTTGATTG  781

Query  959  CAACGGCCTTTACAAATGGATACCAT  984
            |||||||||||||||||||||||||.
Sbjct  782  CAACGGCCTTTACAAATGGATACCAC  807