Nucleotide Global Alignment

Description

• Query: ccsbBroad304_09518
• Subject: NM_001322155.1
• Aligned Length: 984
• Identities: 533
• Gaps: 450

Alignment

Query   1  ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAAAAACGCGTACAGGCTCATCTTGGCAGCCAA  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  CAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGC  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  TGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACC  222
                                          |||||||||||||||||||||||||||||||||||||||||||
Sbjct   1  -------------------------------ATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACC  43

Query 223  AACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGA  296
           ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct  44  AACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGC----------------------------------  83

Query 297  CGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAG  370
                                                                                     
Sbjct  84  --------------------------------------------------------------------------  83

Query 371  CCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTG  444
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  84  -------GAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTG  150

Query 445  ACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCT  518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151  ACGCCAGGCACCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCT  224

Query 519  CTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCA  592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 225  CTTCCTGGAGGCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCA  298

Query 593  ACAATAAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGC  666
           |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299  ACAATGAAGAGGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGC  372

Query 667  AAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCA-------------------------------  709
           |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct 373  AAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGGTATTGCAGCACCGTGGGTGCGCCACCTCC  446

Query 710  --------------------------------------------------------------------------  709
                                                                                     
Sbjct 447  TATCCCATGTCCCACCTCCCACGCTAGAGGGCCGGCAAAGAAGCCAAGTGCCCATAGCCAGAGCCAGGCTTCTT  520

Query 710  ---------------------------------------------------GAACCAACACTATCATCCTGGTA  732
                                                              |||||||||||||||||||||||
Sbjct 521  CCTCGCCTGAGTGGATTCCAGAGCTTCTGCCCTGTCCAGACGCAGCTGCAGGAACCAACACTATCATCCTGGTA  594

Query 733  GATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAAC  806
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595  GATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAAC  668

Query 807  CTATGAGTTCACACTGCAGAGC  828
           ||||||||||||||||||||||
Sbjct 669  CTATGAGTTCACACTGCAGAGC  690