Nucleotide Global Alignment

Description

Query:
ccsbBroad304_09518
Subject:
NR_136212.1
Aligned Length:
3545
Identities:
712
Gaps:
2832

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA  148

Query    1  ------------------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  44
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA  222

Query   45  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT  296

Query  119  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  192
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC  370

Query  193  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG  266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct  371  AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGC----  440

Query  267  TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC  340
                                                                                      
Sbjct  441  --------------------------------------------------------------------------  440

Query  341  ATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG  414
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct  441  -------------------------------------GAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG  477

Query  415  AACCGAGGGGAGCCTGATCCTATCGTTTTGACGC----------------------------------CAGGCA  454
            ||||||||||||||||||||||||||||||||||                                  ||||||
Sbjct  478  AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCCTCTGCATGGCCCGCTGATTGCTCCTCACAGGCA  551

Query  455  CCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAG  528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  CCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAG  625

Query  529  GCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGA  602
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  626  GCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGA  699

Query  603  GGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGG  676
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  GGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGG  773

Query  677  CTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTG  750
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  CTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTG  847

Query  751  ACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCA  824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  ACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCA  921

Query  825  GAGC----------------------------------------------------------------------  828
            ||||                                                                      
Sbjct  922  GAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAA  995

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct  996  ACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTG  1069

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1070  CGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGAT  1143

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1144  ACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACA  1217

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1218  GGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACC  1291

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1292  GACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACAC  1365

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1366  AGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCT  1439

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1440  TTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAG  1513

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1514  GCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAA  1587

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1588  GACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTG  1661

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1662  CAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGAT  1735

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1736  TAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCAT  1809

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1810  GTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAG  1883

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1884  GCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCC  1957

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 1958  CTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGC  2031

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2032  TCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCT  2105

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2106  CTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGC  2179

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2180  TTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGC  2253

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2254  CAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTG  2327

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2328  TGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGA  2401

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2402  TTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCC  2475

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2476  TGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCC  2549

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2550  CCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGG  2623

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2624  ATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGA  2697

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2698  GAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGA  2771

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2772  GGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCA  2845

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2846  CTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCAC  2919

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2920  ATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCA  2993

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 2994  CCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCA  3067

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3068  TGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGT  3141

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3142  GGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGG  3215

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3216  TGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGT  3289

Query  829  --------------------------------------------------------------------------  828
                                                                                      
Sbjct 3290  GACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCA  3363

Query  829  -------------------------------------------------------------------  828
                                                                               
Sbjct 3364  ATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC  3430

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