Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09518
- Subject:
- NR_136212.1
- Aligned Length:
- 3545
- Identities:
- 712
- Gaps:
- 2832
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAAGTCGGCGGCGGTGGCGGAGGCGGTGAGTGCGCGGCTCCGGGGCTGGCCGACTCCGCTAGTGGCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCTGGGCTCGGGGGCTCCGGGCTCTGGGCTCTGGGTGCGCGGACCGGGCCAGGCTGCTTGAAGACCTCGCGA 148
Query 1 ------------------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCAA 222
Query 45 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAACGCGTACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCCTCCAAGTTAGCTGACTTCT 296
Query 119 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGGAGGCACATGGCTGGGCATC 370
Query 193 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGCGAGG 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACTGGCAGGCCCGAGGGC---- 440
Query 267 TGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGTCCTACCTGAAGAAGGTCTCTATGGAGGGCC 340
Sbjct 441 -------------------------------------------------------------------------- 440
Query 341 ATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 414
|||||||||||||||||||||||||||||||||||||
Sbjct 441 -------------------------------------GAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGG 477
Query 415 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGC----------------------------------CAGGCA 454
|||||||||||||||||||||||||||||||||| ||||||
Sbjct 478 AACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGGCCTCTGCATGGCCCGCTGATTGCTCCTCACAGGCA 551
Query 455 CCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAG 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 CCTACGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAG 625
Query 529 GCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGA 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 626 GCTGTGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGA 699
Query 603 GGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGG 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 GGCGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGAGCAAGTACGCGG 773
Query 677 CTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTG 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 CTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCGGACGGCCACGTG 847
Query 751 ACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 ACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGAGTTCACACTGCA 921
Query 825 GAGC---------------------------------------------------------------------- 828
||||
Sbjct 922 GAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCACTGTGGACAGGAA 995
Query 829 -------------------------------------------------------------------------- 828
Sbjct 996 ACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGGCCCTGTGGTTTG 1069
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1070 CGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCAGCAGAGTCTGAT 1143
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1144 ACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTGCACATGTACACA 1217
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1218 GGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATATACATGGACACC 1291
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1292 GACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAGACACACACACAC 1365
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1366 AGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTGGCCAGTAGGTCT 1439
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1440 TTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGCCACAGAACACAG 1513
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1514 GCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATTGGGCACCGAGAA 1587
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1588 GACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTG 1661
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1662 CAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCCCAGCCTCCTGAT 1735
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1736 TAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACGGGGTTTCACCAT 1809
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1810 GTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAG 1883
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1884 GCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTGCTAGATTCAGTGCC 1957
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1958 CTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGTGCACCAGGGGC 2031
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2032 TCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGCCCTGCTCTCTCCCT 2105
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2106 CTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAATAAAACTCTGAGGC 2179
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2180 TTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTATGTCTCCTGTGCAGC 2253
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2254 CAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCACATGTGGATGCCTG 2327
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2328 TGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGATGTGGTAGATGCTGA 2401
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2402 TTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGGGAGGCAGGCTGGCC 2475
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2476 TGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTGCATCTGTCTCAGCC 2549
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2550 CCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTATAAGGGGGTCCCGG 2623
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2624 ATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCTTTTCAGACCCATGA 2697
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2698 GAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTGAGTCCACCTAGGGA 2771
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2772 GGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAGCCTTCCATGGCTCA 2845
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2846 CTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGAAACTGAGGCCCCAC 2919
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2920 ATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGCTGCCAACACATTCA 2993
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2994 CCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATGGTGCCCTGCCCTCA 3067
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3068 TGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGTCTCTGCTCTTGTGT 3141
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3142 GGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGAACAGCCCTCAATGG 3215
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3216 TGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACAGTACCTCAGAATGT 3289
Query 829 -------------------------------------------------------------------------- 828
Sbjct 3290 GACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTGTGGGCCCTAATCCA 3363
Query 829 ------------------------------------------------------------------- 828
Sbjct 3364 ATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCTATAATCC 3430
