Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09518
- Subject:
- XR_001755163.1
- Aligned Length:
- 2408
- Identities:
- 802
- Gaps:
- 1593
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCCAG 74
Query 1 ---------------------ATGTGCATCATCTTCTTTAAGTTTGATCCTCGC------------CCTG---- 37
||| ||.|.||..|| ||||.| ||.|
Sbjct 75 GACAGGGTCACTCAGTGTGGGATG-----------CTGTCAGAATG--CCTCTCGGGGCGGGGACTCCAGTCAA 135
Query 38 TTTCCAAAAACGCG-----------------------TACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT 88
|.|.||||.|||.| .||||||||||||||||||||||||||||||||||||
Sbjct 136 TGTACAAAGACGTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCT 209
Query 89 ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 ACAGCCGACCCTCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAA 283
Query 163 GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 284 GGCAAGGAAGGAGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCC 357
Query 237 GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GCAGCTGGACTGGCAGGCCCGAGGGCGAGGTGAACTTGTCACCCACTTTCTGACCACTGACGTGGACAGCTTGT 431
Query 311 CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCAACCTGAGCACA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 432 CCTACCTGAAGAAGGTCTCTATGGAGGGCCATCTGTACAATGGCTTCAACCTCATAGCAGCCGACCTGAGCACA 505
Query 385 GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 506 GCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTATCGTTTTGACGCCAGGCACCTA 579
Query 459 CGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTG 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 580 CGGGCTGAGCAACGCGCTGCTGGAGACTCCCTGGAGGAAGCTGTGCTTTGGGAAGCAGCTCTTCCTGGAGGCTG 653
Query 533 TGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATAAAGAGGC- 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 654 TGGAACGGAGCCAGGCGCTGCCCAAGGATGTGCTCATCGCCAGCCTCCTGGATGTGCTCAACAATGAAGAGGCG 727
Query 606 ----------------------GCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCC 657
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 728 TGAGTGGGCGGGTCCTGCTGGGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCC 801
Query 658 ATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCA---------------------- 709
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 802 ATGCTGAGCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGGTATTGCAGCACCGTGGGTGC 875
Query 710 -------------------------------------------------------------------------- 709
Sbjct 876 GCCACCTCCTATCCCATGTCCCACCTCCCACGCTAGAGGGCCGGCAAAGAAGCCAAGTGCCCATAGCCAGAGCC 949
Query 710 ------------------------------------------------------------GAACCAACACTATC 723
||||||||||||||
Sbjct 950 AGGCTTCTTCCTCGCCTGAGTGGATTCCAGAGCTTCTGCCCTGTCCAGACGCAGCTGCAGGAACCAACACTATC 1023
Query 724 ATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGA 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 ATCCTGGTAGATGCGGACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGA 1097
Query 798 GACCAGAACCTATGAGTTCACACTGCAGAGC------------------------------------------- 828
|||||||||||||||||||||||||||||||
Sbjct 1098 GACCAGAACCTATGAGTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCC 1171
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1172 TGCCTTGAGGGGCACTGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCA 1245
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1246 TCCCCCGGATCAGGGCCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTA 1319
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1320 TGCCAGTGAGGAGCAGCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACAC 1393
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1394 CTGAGCCCACTCTTGCACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACA 1467
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1468 CACATGCAAGCCATATACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACA 1541
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1542 TGCACAGTTGCACAGACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACC 1615
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1616 TCTCATGTGCTTCTGGCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCC 1689
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1690 CTCCTCTCCTGTGGCCACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACA 1763
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1764 GCCACATTTGGAATTGGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAG 1837
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1838 TCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAA 1911
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1912 GCAATTCTCCTGCCCCAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTG 1985
Query 829 -------------------------------------------------------------------------- 828
Sbjct 1986 TTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGTGGTGATCCACCTGCCT 2059
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2060 CGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAG 2133
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2134 TGCAGACTCATTGCTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTG 2207
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2208 CCAGGAGGCTCCGTGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCC 2281
Query 829 -------------------------------------------------------------------------- 828
Sbjct 2282 CATCTCAGCCAGCCCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGT 2355
Query 829 ---------------------------------------- 828
Sbjct 2356 GAGCTCCTGATAATAAAACTCTGAGGCTTTGGTGAGCGCA 2395
