Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09805
- Subject:
- XR_002958675.1
- Aligned Length:
- 4458
- Identities:
- 960
- Gaps:
- 3496
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCATCCTATGAATTGGGTCATTCATGTCCTACCCAGCTAAAACAGAGGCCAGGAGCCAGGGAGGAAAAGCAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGCCACACAACATTGTTTCCGAAATGGACTTCTCTGCAAGCCTGACTCCTGAGACTGTGCATTGTACCCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AACCAGCTTTATCCATAGCTTCTGCGATAAATGGCTGTAAGTCTTGGACTCCTTGCTCCAAACGCAGCGACTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCAATAGAACCTCCCAGCTCCCAGCCCTTCCTAGTGCCCATGGGCTTTACATAGGGCAAGAGAACATTTCTCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTATAATTGCCATCTCTTTGCTCTCTCAACATGGTGAACACCATCCGGACTCCGTGTATGTCTCAAATTACAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTTTCTTTGCAAATGAAATATGAAATTTAGAGGCTCTTCTAAACACTTTAAATTTGATTTGACATTTTCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCAGATGTAAGTTTTAGAGAATGAGATTCTCCATAAAAATGACCCTTTCATGCTGTGGCCTCCATAGAAGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAGGCCAGGTGCCCACATGGCAGGCATTTATTTTCTCACAGATCTGGAAGCTGCAGGTCCAACTTCGAGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTGGGGTTGTTTCCTCTGAGGCCGCTCCTTCTGGCTGGCAGGGAGTCTCTTCCAGCCGTGTCCTCTGTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTTCCTCTATGCACACGCACCTCTGGGATCTCTCTGCCTCCAAATATCATCTTTTTTTTTTTTTTTTTTTTTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGAGACAGAGTGTTGCTCCTCTTGTCCAGGCTGGAATGCAATGGCACAATCTGGACTCACTGCAACCTCCGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCGAGTTTAAGCGATTCTTCTGCTTCAGCCTCCCGAGTAAAAGGCATGCATCACCACACCTGGTTAATTTTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAGTTTTAGTAGAGATGGGGTCTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTCAGCCTCTCCAAGTGCTGGGATTACAGGCATCAGCCACTATGCCCGGCTGGGATCATATGTTCCACACAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTTGTTCAATAAGCATGGACTGCAACCACCTACATGAATATTCATAGCTCCTCCTGTAGCCTGTTGAATATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGTTTAGCCAACCTCTTCAGCATAAAGCTCCTGCCCAAACCCCTCCTGCTCCTAAATGTCTGTCTCTGGTGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCAGAGGCTGCTCTTCCCAGGCTGCTGGATGGCTACCTTGCAGGCTGTCACCCTTAACAAGAAATAAAGTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTTTGCAAATGCATCCCTTGTGTAATTTGTAGGTCACCGCGCCATGGGAACACGCTACCATGGGAAGGGAGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTGAGACGCGCAGGGAGGCTCCAGACAGGCTGGCCTGGGACACCAGCCGCTGCCCTTCCATAACATGGGGACAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGAGGGCAAAAGTTCAGCCCAACACGGAGGATCTTCGGGCAGGAGATGGGGAAGAAGGAGAAGCAGGAAGGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAGCTCAGTGTGGGGGCGCGCATGGCATCCCGGTGGGACATCTGAGGCCCACACCCACCTGCTGTCCCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCACGGTGGCCACCGAGGGTGAAGGCCTGGGGGGAGGCAGACGCCTGGCCCTTTACTCTCCCTCCCTGTCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGGCCGCTGGGTGGGGGCCGTCTCTGGGATGATCCCCGAGGGCAGGATCCGGGAGTCCCTGCAGAGGCATCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGTCTGTCTTGATGGTGGAGTGGCGGCTCCAGCTGGGCGGGACCACCAGGGGAGGGGCTTGTGCTCTGCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCAGCCTGGTGTGGACCCACCTCCCGGGCGCTGGCTGCAATGACTTTCTCTTTCCCTTTGCAATTGCCTTGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCCTGCCGCACAGAGCGGCCTGTCTTTATCAGAGGTCCCTCTGCCAGGGGGAGGGCCCCAGAGAAAACCAGAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGGTGAGAGACTGAGGAAGATAAAGCGTCCCAGGGCCTCCTACACCAGCGCCTGAGCAGGAAGGGGGAGGGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCATGACTACGAGGCCCTGGGAGGTCACTTTAGGGAGGGCTGTCCTGAAACCTGGAGCCTGGAGCAGAAAGTGA 2072
Query 1 -------------------------------------------------ATGAAGCCTCACTTCAGAAACACAG 25
|||||||||||||||||||||||||
Sbjct 2073 AACCCTGGTGCTCCAGACAAAGATCTTAGTCGGGACTAGCCGGCCAAGGATGAAGCCTCACTTCAGAAACACAG 2146
Query 26 TGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGTC 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACCCATCCTTTCTCGTCGGAATACCGTC 2220
Query 100 TGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGGT 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGGACGCAAAGATCTTTCGAGGCCAGGT 2294
Query 174 GTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACA 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTATTCCCAGCCTGAGCACCACGCAGAAATGTGCTTCCTCTCTTGGTTCTGTGGCAACCAGCTGCCTGCTTACA 2368
Query 248 AGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTG 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AGTGTTTCCAGATCACCTGGTTTGTATCCTGGACCCCCTGCCCGGACTGTGTGGCGAAGCTGGCCGAATTCCTG 2442
Query 322 TCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAG 395
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GCTGAGCACCCCAATGTCACCCTGACCATCTCCGCCGCCCGCCTCTACTACTACTGGGAAAGAGATTACCGAAG 2516
Query 396 GGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGTGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGGG 469
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGCGCTCTGCAGGCTGAGTCAGGCAGGGGCCCGCGTGAAGATTATGGACGATGAAGAATTTGCATACTGCTGGG 2590
Query 470 AAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCAC 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AAAACTTTGTGTACAGTGAAGGTCAGCCATTCATGCCTTGGTACAAATTCGATGACAATTATGCATTCCTGCAC 2664
Query 544 CGCACGCTAAAGGAGATTCTCAGAAACCCGATGGAGGCAATGTATCCACACATATTCTACTTCCACTTTAAAAA 617
||||||||||||||||||||
Sbjct 2665 CGCACGCTAAAGGAGATTCT------------------------------------------------------ 2684
Query 618 CCTACGCAAAGCCTATGGTCGGAACGAAAGCTGGCTGTGCTTCACCATGGAAGTTGTAAAGCACCACTCACCTA 691
Sbjct 2685 -------------------------------------------------------------------------- 2684
Query 692 TCTCCTGGAAGAGGGGCGTCTTCCGAAACCAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTC 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2685 -----------------------------CAGGTGGATCCTGAGACCCATTGTCATGCAGAAAGGTGCTTCCTC 2729
Query 766 TCTTGGTTCTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTG 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 TCTTGGTTCTGTGACGACATACTGTCTCCTAACACAAACTACGAGGTCACCTGGTACACATCTTGGAGCCCTTG 2803
Query 840 CCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCC 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2804 CCCAGAGTGTGCAGGGGAGGTGGCCGAGTTCCTGGCCAGGCACAGCAACGTGAATCTCACCATCTTCACCGCCC 2877
Query 914 GCCTCTACTACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAG 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2878 GCCTCTACTACTTCTGGGATACAGATTACCAGGAGGGGCTCCGCAGCCTGAGTCAGGAAGGGGCCTCCGTGGAG 2951
Query 988 ATCATGGGCTACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTG 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2952 ATCATGGGCTACAAAGATTTTAAATATTGTTGGGAAAACTTTGTGTACAATGATGATGAGCCATTCAAGCCTTG 3025
Query 1062 GAAAGGACTAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAG---------------- 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3026 GAAAGGACTAAAATACAACTTTCTATTCCTGGACAGCAAGCTGCAGGAGATTCTCGAGTGAGGGGTCTCCCCGG 3099
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3100 GCCTCATGGTCTGTCTCCTCTAGCCTCCTGCTCATGTTGTGCAGGCCTCCCCTCCATCCTGGACCAGCTGTGCT 3173
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3174 TTTGCCTGGTCATCCTGAGCCCCTCCTGGCCTCAGGGCCATTCCATAGTGCTCCCCTGCCTCACCACCTCCTCT 3247
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3248 CCGCTCTCCCAGGCTCTTCCTGCAGAGGCCTCTTTCTGCCTCCATGGCTATCCATCCACCCACCAAGACCCTGT 3321
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3322 TCCCTGAGCCTGCATGCCCCTAACCTGCCTTTTCCCATCTCCCCAGCATAACCTAATATTTTTTTTTTTTTTTT 3395
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3396 GAGACGGAATTTCGCTCTGTCACCCAGACTGGAGTGCAATGGCTTGATCTTGGCTCACTGCAAACTCTGCCTAC 3469
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3470 CAGGTTCAAGCGATTCTCCTGCCTCCGCCTCCCGAGTAGCTGGAATTACAGACGCCTGCCACCACGCACAGCTA 3543
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3544 ACTTTTTTTTTTTTTGTATTTTTAGTAGTGACTGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGAC 3617
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3618 CTCAGGTGATCCGCCTATCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGCCCGGCGGCACAA 3691
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3692 CCAAATCTTATTAAACTCACCCTAGGCTGGCCGCGGTGACTCATGCCTATAATCCCCCAGCAATTTGGGAGGCA 3765
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3766 GAGGTGAGAGAATCGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCCACATGACAAAGCCCCATCTCTACAAA 3839
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3840 AAAATTACAAAAAAAAAAAAAACAGGTGTGGTGGCATGCACCTGTAGTTGAAGCTACTTGGAAGGATGAAGTGG 3913
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3914 GAGGATTGCTTGAGCCGGGGAGGTGGAGGCTGCAGTGAACTGAGATCACGTCACTGAACTCCAGTCTGAGCAAC 3987
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 3988 AGATCGAGACCCTGCCTGAAAATAAATCAATAAATAAACTCAACCGAAATGGGTATGAAAGTTGAAATGGGTAT 4061
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 4062 GTAAGTTGAAAACCAGAAGTTTTGAGAAACATCCTTTGTTAACTTTCATCCTACAAATTGGGTCATTCATGTCC 4135
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 4136 TACGCAGCTAAAACAGAGCCCAGGAGCCAGGGAGGAAAAGCAGTCAGGCCACACACCATTGCTCCCAAAATGGA 4209
Query 1120 -------------------------------------------------------------------------- 1119
Sbjct 4210 CTTCTCTGCAAGCCTGACTCCTGAAACTGTGCATTGTACCCTGAAACCAGCTTTATCCATAGCTTCTGCAATAA 4283
Query 1120 ------------------ 1119
Sbjct 4284 ATGGCTGTAAGTCTTGGA 4301
