Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_09906
- Subject:
- XM_017320451.2
- Aligned Length:
- 1902
- Identities:
- 1055
- Gaps:
- 639
Alignment
Query 1 ATGGCCATGTGGAACAGGCCATGCCAGAGGCTGCCTCAGCAGCCTCTGGTAGCTGAGCCCACTGCAGAGGGGGA 74
|||||||..||||||||||||..||..|| |||||||.|||.|.|.|||||..|||||||.|..||
Sbjct 1 ATGGCCACATGGAACAGGCCACACCCAAG---------GCAGCCTGTGGCACCAGAGCCAGCTGCAGAAGACGA 65
Query 75 GCCACACCTGCCCACGGGCCGGGAGCTGACTGAGGCCAACCGCTTCGCCTATGCTGCCCTCTGTGGCATCTCCC 148
..|.||.|.||||..||||||||||||..|.||||||||.||||||||||||||.|||||.||||||.||||..
Sbjct 66 TTCCCAGCAGCCCCTGGGCCGGGAGCTCTCGGAGGCCAATCGCTTCGCCTATGCCGCCCTGTGTGGCTTCTCGT 139
Query 149 TGTCCCAGTTATTTCCTGAACCCGAACACAGCTCCTTCTGCACAGAGTTCATGGCAGGCCTGGTGCAGTGGCTG 222
||||.|||.|.|||||.|||||.|||||.|||||||||||||||||.||..||.|.|||||||||.|.||||||
Sbjct 140 TGTCACAGCTGTTTCCAGAACCTGAACAAAGCTCCTTCTGCACAGAATTTGTGACGGGCCTGGTGAAATGGCTG 213
Query 223 GAGTTGTCTGAAGCTGTCTTGCCAACCATGACTGCTTTTGCGAGCGGCCTGGGAGGTGAAGGAGCAGATGTGTT 296
.|..||||||||..||||.|.||||||||.|..||.|||||.||.|||||||||||.||||||||.||..|.||
Sbjct 214 CATCTGTCTGAAAGTGTCCTCCCAACCATAATGGCCTTTGCCAGTGGCCTGGGAGGCGAAGGAGCCGACATCTT 287
Query 297 TGTTCAAATTTTACTGAAGGACCCCATCTTGAAGGACGACCCGACGGTGATCACTCAGGACCTTCTGAGCTTCT 370
||.|||.|.||||.||.||||||||||..|||..|||.||||..|.|...|||.|||||||||.||||||||||
Sbjct 288 TGCTCAGACTTTATTGCAGGACCCCATTCTGAGAGACAACCCATCAGCAGTCAGTCAGGACCTCCTGAGCTTCT 361
Query 371 CACTCAAGGATGGGCACTATGACGCCCGGGCCAGAGTCCTCGTTTGCCACATGACCTCCCTGCTCCAAGTGCCC 444
||||||||.||||.||||||||.|||||||||||||||||||||||.||..||||||||||||||||.||||||
Sbjct 362 CACTCAAGAATGGACACTATGATGCCCGGGCCAGAGTCCTCGTTTGTCATGTGACCTCCCTGCTCCAGGTGCCC 435
Query 445 TTGGAGGAGCTGGATGTCCTTGAAGAGATGTTCCTGGAGAGCCTGAAGGAAATCAAAGAAGAGGAATCTGAAAT 518
.||||||||||.||..|.||.||||||.||||||||||||||||||||||...||||||.|||||.|||||.|.
Sbjct 436 ATGGAGGAGCTTGACATTCTGGAAGAGGTGTTCCTGGAGAGCCTGAAGGACGCCAAAGAGGAGGAGTCTGAGAC 509
Query 519 GGCCGAGGCATCCCGAAAGAAGAAAGAAAACCGGAGGAAATGGAAGCGTTATCTCCTGATAGGCCTGGCGACTG 592
.||.|||||||||||.||||.|||||||||.||||||||.|||||.||.|||||.||||||||||||||.||.|
Sbjct 510 CGCAGAGGCATCCCGGAAGAGGAAAGAAAAACGGAGGAAGTGGAAACGCTATCTTCTGATAGGCCTGGCCACAG 583
Query 593 TCGGAGGCGGAACGGTGATCGGTGTGACTGGAGGTCTAGCTGCACCCCTTGTTGCCGCTGGAGCAGCGACGATT 666
|.||||||||.||.|||||.|||||||||||.||.||||||||.||.|||||.||.||.|||||.||.||.||.
Sbjct 584 TTGGAGGCGGGACAGTGATTGGTGTGACTGGGGGGCTAGCTGCCCCACTTGTCGCTGCAGGAGCCGCAACCATC 657
Query 667 ATTGGCAGCGCCGGGGCAGCGGCTCTGGGCTCAGCAGCCGGCATAGCCATCATGACCTCGCTGTTTGGTGCAGC 740
||.|||||.|||||||||||.||..|||||||||..||.|||||.||..|.|||||.||.||||||||||||||
Sbjct 658 ATAGGCAGTGCCGGGGCAGCCGCGTTGGGCTCAGTGGCTGGCATCGCTGTTATGACTTCACTGTTTGGTGCAGC 731
Query 741 TGGAGCTGGCCTGACAGGATACAAGATGAAGAAGCGAGTGGGAGCCATTGAAGAGTTCACGTTTCTGCCTCTGA 814
.||||||||||||||||||||||||||||||||||||||.||.||||||||.|||||||.|||.||||||.|||
Sbjct 732 CGGAGCTGGCCTGACAGGATACAAGATGAAGAAGCGAGTCGGGGCCATTGAGGAGTTCATGTTCCTGCCTTTGA 805
Query 815 CGGAGGGCAGGCAGCTGCACATCACCATCGCCGTCACGGGGTGGCTCGCTTCTGGCAAATACCGCACCTTCAGT 888
||||.|||.|||||||.||.||||||||.|||.||||.||.|||||||..||.||||.|||||||||.||.|.|
Sbjct 806 CGGAAGGCCGGCAGCTACATATCACCATTGCCATCACTGGCTGGCTCGGGTCCGGCAGATACCGCACATTTAAT 879
Query 889 GCCCCGTGGGCTGCCCTGGCCCACAGCCGTGAGCAGTACTGCCTGGCCTGGGAAGCCAAGTACCTGATGGAGCT 962
|||||.|||...|||||.||||.|||||..|||||||||||||||||||||||.||||||||||||||||||.|
Sbjct 880 GCCCCATGGATGGCCCTAGCCCGCAGCCAGGAGCAGTACTGCCTGGCCTGGGAGGCCAAGTACCTGATGGAGTT 953
Query 963 CGGCAATGCCCTGGAGACCATCCTCAGTGGTCTCGCCAACATGGTGGCCCAGGAGGCCCTAAAGTACACAGTGT 1036
.|||||||||||||||||||||||||||||.|||||.||||||||.||.||||||||.||.||||||||||||.
Sbjct 954 GGGCAATGCCCTGGAGACCATCCTCAGTGGCCTCGCTAACATGGTAGCACAGGAGGCTCTCAAGTACACAGTGC 1027
Query 1037 TGTCTGGCATTGTGGCTGCCCTGACCTGGCCAGCCTCACTCCTCAGTGTCGCCAATGTCATCGACAACCCCTGG 1110
|.|||||.||.||||||||.||.|||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1028 TCTCTGGTATCGTGGCTGCTCTAACCTGGCCAGCCTCACTCCTCAGCGTCGCCAATGTCATCGACAACCCCTGG 1101
Query 1111 GGGGTGTGTCTCCATCGATCAGCAGAGGTTGGCAAGCACCTGGCCCACATCCTGCTCTCCCGGCAGCAGGGGCG 1184
||.|||||.|||||.|||||.|||||.|||||||||||||||||.||||||||.|||||.|||||.|||||.||
Sbjct 1102 GGCGTGTGCCTCCACCGATCGGCAGAAGTTGGCAAGCACCTGGCGCACATCCTTCTCTCACGGCAACAGGGCCG 1175
Query 1185 ACGACCTGTCACCTTGATTGGCTTCAGCCTGGGAGCCAGAGTCATCTACTTCTGTCTGCAGGAGATGGCTCAAG 1258
..|||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||.||||||||.|
Sbjct 1176 GAGACCTGTCACCTTGATTGGATTCAGCCTGGGAGCCAGAGTCATCTACTTTTGTCTGCAAGAAATGGCTCAGG 1249
Query 1259 AGAAAGATTGCCAAGGAATCATCGAGGACGTCATCCTGCTGGGTGCGCCTGTGGAGGGAGAAGCCAAGCATTGG 1332
||.|||.|| ||.|.
Sbjct 1250 AGCAAGTTT--CAGGT---------------------------------------------------------- 1263
Query 1333 GAGCCTTTCCGGAAGGTGGTGTCCGGGAGGATCATCAACGGCTACTGCAGGGGAGACTGGCTGCTGAGTTTCGT 1406
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1407 GTACCGCACATCCTCGGTGCAGCTCCACGTCGCCGGCCTACAGCCCGTGCTGCTGCAGGACAGGAGGGTGGAGA 1480
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1481 ACGTGGACCTGACCTCTGTGGTCAGCGGCCACCTGGACTATGCCAAGCAGATGGATGCCATCCTGAAGGCCGTG 1554
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1555 GGCATCCGCACCAAGCCAGGCTGGGACGAGAAGGGGCTCTTGCTGGCCCCAGGCTGCCTGCCCTCCGAGGAGCC 1628
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1629 TCGCCAGGCAGCAGCTGCCGCCTCATCAGGCGAGACCCCCCACCAGGTTGGGCAAACCCAGGGTCCCATATCCG 1702
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1703 GAGACACCTCCAAANTGGCCATGTCCACAGACCCCAGCCAAGCCCAGGTGCCAGTAGGGCTGGACCAGTCTGAA 1776
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1777 GGGGCCTCCCTTCCTGCTGCTGCCAGCCCTGAAAGGCCCCCCATCTGCAGCCATGGCATGGACCCCAACCCACT 1850
Sbjct 1264 -------------------------------------------------------------------------- 1263
Query 1851 GGGCTGCCCCGATTGTGCCTGCAAGACCCAGGGCCCCAGCACGGGGCTGGAC 1902
Sbjct 1264 ---------------------------------------------------- 1263
