Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10711
- Subject:
- NR_148224.1
- Aligned Length:
- 2613
- Identities:
- 335
- Gaps:
- 2277
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCGCCATCTTTATGAGGAGAATTCTAGCGGCGCTTTCTCCCGCTCTCGCCTCCGCGCTAGCGCCCTGCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGCGGAAGTAGCGGAGCCGGGCTCGGCCCCCTTAAAGGGACAGGGACTGCTGCAACCTACGGGGTGTACTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGAACGAGGGGTGAAGCGGCCCAGGTGAGGCTCGCCATGGCCAAACAGCTGCAGGCCCGAAGGCTAGACGGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCGACTACAACCCCTGGGTGGAGTTTGTGAAACTGGCCAGTGAGCATGACGTCGTGAACTTGGGCCAGGGCTTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGGATTTCCCACCACCAGACTTTGCCGTGGAAGCCTTTCAGCACGCTGTCAGTGGAGACTTCATGCTTAACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTACACCAAGACATTTGGTTACCCACCACTGACGAAGATCCTGGCAAGTTTCTTTGGGGAGCTGCTGGGTCAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGATAGACCCGCTCAGGAATGTGCTGGTGACTGTTGGTGGCTATGGGGCCCTGTTCACAGCCTTCCAGGCCCTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGACGAAGGAGACGAGGTCATCATCATCGAACCCTTTTTTGACTGCTACGAGCCCATGACAATGATGGCAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTCGTCCTGTGTTTGTGTCCCTGAAGCCGGGTCCCATCCAGAATGGAGAACTGGGTTCCAGCAGCAACTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCTGGACCCCATGGAGCTGGCCGGCAAATTCACATCACGCACCAAAGCCCTGGTCCTCAACACCCCCAACAAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCCTGGGCAAGGTGTTCTCCAGGGAAGAGCTGGAGCTGGTGGCCAGCCTTTGCCAGCAGCATGACGTGGTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TATCACTGATGAAGTCTACCAGTGGATGGTCTACGACGGGCACCAGCACATCAGCATTGCCAGCCTCCCTGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTGGGAACGGACCCTGACCATCGGCAGCGCCGGCAAGACCTTCAGCGCCACTGGCTGGAAGGTGGGCTGGGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGGGTCCAGATCACATCATGAAGCACCTGCGGACCGTGCACCAGAACTCCGTCTTCCACTGCCCCACGCAGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGGCTGCAGTAGCCGAGAGCTTTGAACGGGAGCAGCTGCTCTTCCGCCAACCCAGCAGCTACTTTGTGCAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCCGCAGGCCATGCAGCGCTGCCGTGACCACATGATACGTAGCCTACAGTCAGTGGGCCTGAAGCCCATCATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCTCAGGGCAGCTACTTCCTCATCACAGACATCTCAGACTTCAAGAGGAAGATGCCTGACTTGCCTGGAGCTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGATGAGCCCTATGACAGACGCTTCGTCAAGTGGATGATCAAGAACAAGAGATGCTGTGTGGGCTGGCAGGATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCTGCCTCTTTGGATCTCCATCTTCCCATCTGTACAGTGAGGAGTTGGCCCATTAACTCTTGAGTTCATCCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTGATCTGTGACTCTAAGGCTTTGTTCTTCTCTGGCTCTGCCCTGACCTGCTCCATGATCCTCCCTCTGTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCCTCCCTCTGCCCTCTATACCCAGGGAGGGACTTGGAATGATGTTCTGGGATTCTTTTCTTCTGACTTTGTGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTTTTTGTTTTGGATGGATTTTCTCTCTTTCGCCCAGGCTGCGGTGAAGTGGCGCAATCTGGCTCACTGCAA 1628
Query 1 ---------------------------------------------------------------ATGCGCCACCA 11
|||||||||||
Sbjct 1629 CCTCCACCCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCA 1702
Query 12 CACCCGGCCAATTTTTTTATTTTTGGTAGAGACGGGGTTTAGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGA 85
||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACCCGGCCAATTTTTGTATTTTTGGTAGAGACGGGGTTTAGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGA 1776
Query 86 CCTCAGGTGATCCACCCGTCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCACCTGGCCTTGT 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCTCAGGTGATCCACCCGTCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCACCTGGCCTTGT 1850
Query 160 TCCTCTGACTTTGATGCAGCTCTAGGTGCTGGATTGGAGCTAACTCTCCTTCCCCGCCTGGTCGTGGGAACCTC 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCCTCTGACTTTGATGCAGCTCTAGGTGCTGGATTGGAGCTAACTCTCCTTCCCCGCCTGGTCGTGGGAACCTC 1924
Query 234 TCTGTCCCCTCCGGAGCCAAGGCCTGCTGGGCCACGAGGCCGTGTTGAGACATGTCCTTCCTCCTCCCCAGGGC 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TCTGTCCCCTCCGGAGCCAAGGCCTGCTGGGCCACGAGGCCGTGTTGAGACATGTCCTTCCTCCTCCCCAGGGC 1998
Query 308 TTGGTGGCCATCCCTGTCTCCATCTTCTA--------------------------------------------- 336
|||||||||||||||||||||||||||||
Sbjct 1999 TTGGTGGCCATCCCTGTCTCCATCTTCTATAGTGTGCCACATCAGAAGCACTTTGACCACTATATCCGCTTCTG 2072
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2073 TTTTGTGAAGGATGAAGCCACGCTCCAGGCCATGGACGAGAAGCTGCGGAAGTGGAAGGTGGAACTCTAGCCCT 2146
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2147 GAAGTCACGCCTTGGCCCTGACATCCCCACATGCCCGCAGAGATCCTCTTTGAGTGTCTGTCTTTGTCCAGGTT 2220
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2221 TCAGACATTTCTAGGTTGGGGAAGATGCTATTGGGAAACCTCTTCTCCGTGACACAGAATGTTCTGGGTGGGAG 2294
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2295 CCGCCCTTCTTCATCTTAGAGAACCAAGTGCCTCCTGTCTGAAAGGTGAGGGTGGCCTGACCTGGGCCTCTCCC 2368
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2369 TGCCCCTCCATAGGTGGGTTTGTAGGGTCTTGTGTTGCTTCTGGTCTCTCCAGGCTTGGCTGAGACGGACGGTA 2442
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2443 GACTTCCACCATGTACCGATCACATCCCAGCTCTGCATGGCCCCTGCTAAGGCTCAGGTATAACCTCACCTTCC 2516
Query 337 -------------------------------------------------------------------------- 336
Sbjct 2517 CTGGCTCATCTTGGCCTTGGGGAGTTGCCTTTAGGCTTGAGTCCTCAAGCCTCTCCTTTTCGTCCATAATAAAA 2590
Query 337 ----------------------- 336
Sbjct 2591 TGTTTAAGTTATTAAGATCCTTA 2613
