Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11285
- Subject:
- XM_006518026.3
- Aligned Length:
- 4146
- Identities:
- 600
- Gaps:
- 3495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGGACCCTTCGTCCAGCGAAGAGGAGTCAGATGAGATCCTGGAAGAGGAGAGGGGCAAGGATGTGCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGCCGCGTCTGGAGCGCGCCTGTCTCCCAGCCGCACCAGCGAGGGCTCGGCAGGCAGCGCCGGGATGGGGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCGCCGGGGCCGGGGTGGGCGCCGGCGGCGGTGGGGGTAGCGGCGCGAGCAGCGGCGGCGGGGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCTGCAGCCCAGCAGCCGCGCCGGCGGCGGCCGGCCTTCCAGCCCTAGCCCGTCGGTGGTGAGCGAGAAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGAAGAGTTGGAGAGGCTGCAGAAGGAGGAGGAAGAGAGGAAGAAGAGGCTGCAGCTGTACGTGTTCGTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGCTGCATCGCCTACCCCTTCAACGCCAAGCAGCCCACCGACATGGCTCGGCGGCAGCAGAAGATCAGCAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCAGCTACAGACTGTCAAAGACCGGTTCCAGGCTTTTCTCAATGGGGAGACCCAAATCGTAGCTGATGAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTTATGAATGCTGTCCAGAGCTACTATGAGGTGTTTCTCAAGAGTGACCGTGTGGCCCGCATGGTGCAGAGTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGGCTGCTCAGCCAATGACTCTCGGGAGGTCTTCAAGAAACACATCGAGAAGAGGGTGCGCAGCCTACCTGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGACGGCCTCAGCAAGGAGACAGTGCTAAGCTCTTGGATGGCCAAGTTTGATGCCATCTACCGTGGTGAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCCAGGAAGCAGCAAGCCCGGATGACAGCCAGTGCAGCTTCTGAGTTGATTCTGAGCAAGGAACAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGAGATGTTTCAGAACATTCTTGGGATCAAGAAGTTTGAACATCAACTCCTGTATAATGCCTGTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCAGATGAGCAGGCAGCCCAGATCAGACGAGAGCTGGATGGACGTCTCCAAATGGCAGATCAAATAGCCAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACGCAAATTTCCTAAGTTCGTATCCAAAGAAATGGAAAACATGTACATTGAGGAGCTGAAGTCCTCCGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTGCTCATGGCCAACTTGGAGAGCATGCCGGTGTCCAAGGGTGGAGAGTTCAAGCTACAGAAACTGAAACGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCACAATGCTTCCATCATTGACATGGGTGAGGAGAGTGAGAACCAGCTTTCTAAGTCAGATGTCCTGCTGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTCTCCTTGGAGGTGGTGATCATGGAAGTCCAAGGCCTTAAGTCCTTGGCTCCAAATCGAATTGTATACTGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAATGGAGGTGGAGGGTGGAGAGAAACTTCAGACAGATCAAGCAGAGGCTTCTAAACCAACCTGGGGCACTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGCGACTTCTCCACAACCCATGCGCTGCCAGCTGTTAAAGTAAAACTATTCACAGAGAGCACTGGTGTCCTGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTGGAAGACAAGGAACTCGGGCGGGTGATCCTCCATCCCACCCCAAATAGCCCCAAACAATCTGAGTGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAATGACAGTCTCCAAAAACTGCCCCGATCAAGACCTCAAAATCAAACTTGCTGTCCGAATGGATAAGCCTCAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACATGAAGCACTCTGGGTACTTATGGACCATTGGTAAGAATGTGTGGAAGAGGTGGAAGAAGAGGTTCTTTGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTGGTGCAGGTCAGCCAGTACACTTTTGCCATGTGCAGCTATCGAGAAAAGAAGGCAGAGCCTCAGGAACTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TACAGCTGGACGGCTACACCGTGGATTACACCGACCCTCAGCCAGGTTTGGAGGGTGGCCGAGCCTTCTTCAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAGTCAAAGAAGGAGACACGGTGATATTTGCAAGTGATGATGAACAAGATCGAATTTTGTGGGTCCAAGCTAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTACAGGGCCACTGGCCAGTCGCACAAACCTGTTCCCCCTACCCAGGTGCAGAAGCTCAACGCCAAGGGCGGAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGTGCCTCAGCTGGATGCCCCCATCTCACAATTTTACGCAGATAGAGCTCAGAAGCATGGCATGGATGAATTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATCTCTTCCAACCCCTGTAACTTTGACCACGCTTCCCTCTTTGAGATGGTGCAGCGGCTGACTTTGGATCACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTTAATGATTCCTATTCTTGCCTGGGCTGGTTCAGTCCTGGCCAGGTGTTTGTGTTAGATGAGTATTGCGCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAAATGGAGTCCGAGGATGTCACCGGCATCTCTGCTACCTTAGAGACTTGCTGGAACGAGCAGAAAATGGCGCG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATGATTGACCCCACGCTTCTTCACTACAGCTTTGCCTTCTGCGCGTCCCATGTCCATGGTAACAGGCCTGATGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AATCGGAACTGTGACTGTTGAAGAAAAAGAACGCTTTGAAGAAATCAAAGAGAGACTCCGAGTTCTGCTGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATCAAATTACACATTTCAGGTACTGCTTTCCATTTGGTCGACCTGAAGGTGCTTTGAAAGCTACTCTCTCACTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTGGAACGGGTTTTGATGAAAGATATTGTCACTCCAGTACCACAAGAAGAGGTCAAAACTGTCATCCGTAAATG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTAGAGCAGGCTGCTCTAGTCAACTACTCACGCCTATCTGAGTATGCCAAAATTGAAGGGAAAAAGAGAGAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGGATTTAACCATTCAGAATCAAAAGGATGCAGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATGTAGGCCGCTTAATCACTCCCGCCAAAAAGCTCGAAGACACAATCCGTCTTGCTGAACTAGTCATCGAAGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTGCAACAAAACGAGGAGCACCACGCCGAGGGGAAAGAGCCACATGTTGATAAAGGAGAAGCCTTTGCGTGGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGTCAGACTTAATGGTGGAGCATGCGGAGACGTTCCTGTCACTCTTTGCAGTGGACATGGATGCAGCCTTAGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGCAACCCCCAGACACGTGGGACAGTTTCCCACTCTTCCAGCTGCTGAATGACTTTCTCCGTACAGACTATAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTTGTGCAATGGAAAGTTTCACAAACACCTGCAGGACCTGTTCGCCCCACTTGTTGTTAGATATGTGGATCTGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGGAGTCCTCCATTGCACAATCTATCCACAGGGGCTTTGAGCGGGAGTCATGGGAGCCAGTCAAGAGTTTAACC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGTAACCTACCCAATGTGAACCTACCCAATGTGAACCTACCCAAAGTACCAAATCTACCAGTTAACATCCCTCT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGGCATCCCACAGATGCCCACTTTTTCGGCACCGTCATGGATGGCTGCTATATATGATGCTGATAATGGATCAG 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GTACATCAGAAGATTTGTTCTGGAAACTTGATGCCCTTCAGACTTTCATCCGTGACCTACACTGGCCTGAGGAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GAGTTTGGAAAACACTTAGAGCAGCGGCTAAAACTGATGGCAAGTGACATGATTGAGTCCTGCGTCAAAAGAAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CAGGATTGCATTTGAAGTTAAGCTGCAAAAAACCAGTCGATCAACAGATTTTCGAGTCCCACAGTCAATATGCA 3478
Query 1 --ATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGAGTTT 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CCATGTTTAATGTTATGGTTGATGCCAAAGCTCAATCAACAAAACTTTGCAGCATGGAAATGGGCCAAGA---- 3548
Query 73 GCTAAAATGTGGCATCAATACCATTCAAAAATAGACGAACTAATTGAAGAAACTGTTAAAGAAATGATAACACT 146
||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||
Sbjct 3549 -----------GCATCAATACCATTCAAAAATAGATGAACTAATTGAAGAAACCGTTAAAGAAATGATCACACT 3611
Query 147 CTTGGTTGCAAAGTTCGTTACTATCTTGGAAGGAGTGCTGGCAAAATTATCCAGATATGACGAAGGGACTTTGT 220
.|||||.||||||||.||.|||||.||||||||.||.||||||||.|||||||||||||||||.||||||||||
Sbjct 3612 TTTGGTGGCAAAGTTTGTAACTATATTGGAAGGCGTACTGGCAAAGTTATCCAGATATGACGAGGGGACTTTGT 3685
Query 221 TTTCTTCTTTTCTGTCATTTACCGTGAAGGCAGCTTCCAAATATGTGGATGTACCTAAACCCGGGATGGACGTG 294
|||||||.|||||||||||.||.|||||||||||||||||.||||||||.||.|||||||||||||||||||||
Sbjct 3686 TTTCTTCGTTTCTGTCATTCACGGTGAAGGCAGCTTCCAAGTATGTGGACGTGCCTAAACCCGGGATGGACGTG 3759
Query 295 GCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTGCGTGATAAGGTCAATGAGGAGATGTACAT 368
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 3760 GCCGACGCCTACGTGACTTTCGTCCGCCATTCTCAGGATGTCCTTCGTGATAAGGTCAATGAGGAGATGTATAT 3833
Query 369 AGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACGTGATCTGCACCTGGTTGACGGACCGGATGGACT 442
||||||||||||||||||||||||||||||||||||||||.|.||||||||.|||.||||.|||.||||||||.
Sbjct 3834 AGAAAGGTTATTTGATCAATGGTACAACAGCTCCATGAACATCATCTGCACGTGGCTGACCGACAGGATGGACC 3907
Query 443 TACAGCTTCATATTTATCAGTTGAAAACACTAATTAGGATGGTAAAGAAAACCTACAGAGATTTCCGATTGCAA 516
|.|||||.||.|||||.|||.|||||||.||.||.||||||||||||||||||||.||||||||||||||||||
Sbjct 3908 TGCAGCTCCACATTTACCAGCTGAAAACCCTGATCAGGATGGTAAAGAAAACCTATAGAGATTTCCGATTGCAA 3981
Query 517 GGGGTCCTGGACTCCACCTTAAACAGCAAGACCTATGAAACGATCCGGAACCGTCTCACTGTGGAGGAAGCCAC 590
|||||||||||.||||||||||||||||||||||||||.||.|||||.|||||||||||||||||||||||.||
Sbjct 3982 GGGGTCCTGGATTCCACCTTAAACAGCAAGACCTATGAGACCATCCGAAACCGTCTCACTGTGGAGGAAGCTAC 4055
Query 591 AGCATCAGTGAGTGAAGGTGGGGGACTGCAGGGCATCAGCATGAAGGACAGCGATGAGGAAGACGAAGAAGACG 664
|||.|||||||||||.||||||||..|.||.||.|||||||||||||||||.|||||||||||.||||||||.|
Sbjct 4056 AGCGTCAGTGAGTGAGGGTGGGGGCTTACAAGGTATCAGCATGAAGGACAGTGATGAGGAAGATGAAGAAGATG 4129
Query 665 AT 666
||
Sbjct 4130 AT 4131
