Nucleotide Global Alignment

Description

• Query: ccsbBroad304_11482
• Subject: XM_011243716.1
• Aligned Length: 1554
• Identities: 982
• Gaps: 423

Alignment

Query    1  ATGGATGCTGATGAGGGTCAAGACATGTCCCAAGTTTCAGGGAAGGAAAGCCCCCCTGTAAGCGATACTCCAGA  74
            |||||||..||||||||||||||||||||||||||||||||.|||||.||||||||.||.||.||.||||||||
Sbjct    1  ATGGATGTCGATGAGGGTCAAGACATGTCCCAAGTTTCAGGAAAGGAGAGCCCCCCAGTCAGTGACACTCCAGA  74

Query   75  TGAGGGCGATGAGCCCATGCCGATCCCCGAGGACCTCTCCACCACCTCGGGAGGACAGCAAAGCTCCAAGAGTG  148
            |||.||.||||||||||||||..||||.||||||||.|||||.|||||.||||.||||||.|.|||||||||||
Sbjct   75  TGAAGGGGATGAGCCCATGCCTGTCCCTGAGGACCTGTCCACTACCTCTGGAGCACAGCAGAACTCCAAGAGTG  148

Query  149  ACAGAGTCGTGGCCAGTAATGTTAAAGTAGAGACTCAGAGTGATGAAGAGAATGGGCGTGCCTGTGAAATGAAT  222
            |                                                                         
Sbjct  149  A-------------------------------------------------------------------------  149

Query  223  GGGGAAGAATGTGCGGAGGATTTACGAATGCTTGATGCCTCGGGAGAGAAAATGAATGGCTCCCACAGGGACCA  296
                                                                                      
Sbjct  150  --------------------------------------------------------------------------  149

Query  297  AGGCAGCTCGGCTTTGTCGGGAGTTGGAGGCATTCGACTTCCTAACGGAAAACTAAAGTGTGATATCTGTGGGA  370
                                    |.|||||||                                         
Sbjct  150  ------------------------TCGAGGCAT-----------------------------------------  158

Query  371  TCATTTGCATCGGGCCCAATGTGCTCATGGTTCACAAAAGAAGCCACACTGGAGAACGGCCCTTCCAGTGCAAT  444
                                                             .||.||||||||.|||||||||||.
Sbjct  159  -------------------------------------------------GGGTGAACGGCCTTTCCAGTGCAAC  183

Query  445  CAGTGCGGGGCCTCATTCACCCAGAAGGGCAACCTGCTCCGGCACATCAAGCTGCATTCCGGGGAGAAGCCCTT  518
            |||||.||||||||.||.||||||||.||||||||.||.|||||||||||||||||.||.||.|||||||||||
Sbjct  184  CAGTGTGGGGCCTCCTTTACCCAGAAAGGCAACCTCCTGCGGCACATCAAGCTGCACTCGGGTGAGAAGCCCTT  257

Query  519  CAAATGCCACCTCTGCAACTACGCCTGCCGCCGGAGGGACGCCCTCACTGGCCACCTGAGGACGCACTCC----  588
            |||||||||.||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||    
Sbjct  258  CAAATGCCATCTTTGCAACTATGCCTGCCGCCGGAGGGACGCCCTCACCGGCCACCTGAGGACGCACTCCGTTG  331

Query  589  --------------------------------------------------------------------------  588
                                                                                      
Sbjct  332  GTAAGCCTCACAAATGTGGATATTGTGGCCGGAGCTATAAACAGCGAAGCTCTTTAGAGGAGCATAAAGAGCGA  405

Query  589  ---------------------------------------------GTCATTAAAGAAGAAACTAATCACAGTGA  617
                                                         ||||||||.|||||||||||.||||..||
Sbjct  406  TGCCACAACTACTTGGAAAGCATGGGCCTTCCGGGCATGTACCCAGTCATTAAGGAAGAAACTAACCACAACGA  479

Query  618  AATGGCAGAAGACCTGTGCAAGATAGGATCAGAGAGATCTCTCGTGCTGGACAGACTAGCAAGTAACGTCGCCA  691
            .|||||||||||||||||||||||||||.|||||||.||.||.||.||||||||.||.|||||.||.|||||||
Sbjct  480  GATGGCAGAAGACCTGTGCAAGATAGGAGCAGAGAGGTCCCTTGTCCTGGACAGGCTGGCAAGCAATGTCGCCA  553

Query  692  AACGTAAGAGCTCTATGCCTCAGAAATTTCTTGGGGACAAGGGCCTGTCCGACACGCCCTACGACAGCAGCGCC  765
            |||                              |.||||||.|||||||.||||.||||||.||   |||.|||
Sbjct  554  AAC------------------------------GAGACAAGTGCCTGTCAGACATGCCCTATGA---CAGTGCC  594

Query  766  AGCTACGAGAAGGAGAACGAAATGATGAAGTCCCACGTGATGGACCAAGCCATCAACAACGCCATCAACTACCT  839
            |.|||.|||||||||   ||.|||||||..|||||||||||||||||.|||||||||||.||||||||||||||
Sbjct  595  AACTATGAGAAGGAG---GATATGATGACATCCCACGTGATGGACCAGGCCATCAACAATGCCATCAACTACCT  665

Query  840  GGGGGCCGAGTCCCTGCGCCCGCTGGTGCAGACGCCCCCGGGCGGTTCCGAGGTGGTCCCGGTCATCAGCCCGA  913
            ||||||.||||||||||||||..||||||||||.|||||.||..|.|||||||||||.||.|||||||||.|.|
Sbjct  666  GGGGGCTGAGTCCCTGCGCCCATTGGTGCAGACACCCCCCGGTAGCTCCGAGGTGGTGCCAGTCATCAGCTCCA  739

Query  914  TGTACCAGCTGCACAAGCCGCTCGCGGAGGGCACCCCGCGCTCCAACCACTCGGCCCAGGACAGCGCCGTGGAG  987
            |||||||||||||||||||.|.|.|.||.|||.||||.||.||||||||.||.||.|||||   |||||||||.
Sbjct  740  TGTACCAGCTGCACAAGCCCCCCTCAGATGGCCCCCCACGGTCCAACCATTCAGCACAGGA---CGCCGTGGAT  810

Query  988  AACCTGCTGCTGCTCTCCAAGGCCAAGTTGGTGCCCTCGGAGCGCGAGGCGTCCCCGAGCAACAGCTGCCAAGA  1061
            |||.||||||||||.|||||||||||||..|||.|.||||||||.|||||.|||||||||||||||||||||||
Sbjct  811  AACTTGCTGCTGCTGTCCAAGGCCAAGTCTGTGTCATCGGAGCGAGAGGCCTCCCCGAGCAACAGCTGCCAAGA  884

Query 1062  CTCCACGGACACCGAGAGCAACAACGAGGAGCAGCGCAGCGGTCTCATCTACCTGACCAACCACATCGCCCCGC  1135
            ||||||.||.||.|||||||||...|||||.|||||||||||.||.||||||||.||||||||||||..|||||
Sbjct  885  CTCCACAGATACAGAGAGCAACGCGGAGGAACAGCGCAGCGGCCTTATCTACCTAACCAACCACATCAACCCGC  958

Query 1136  ACGCGCGCAACGGGCTGTCGCTCAAGGAGGAGCACCGCGCCTACGACCTGCTGCGCGCCGCCTCCGAGAACTCG  1209
            |.||.|||||.||||||.|.||||||||||||||.|||||||||||..|||||.|.||.|||||.|||||||||
Sbjct  959  ATGCACGCAATGGGCTGGCTCTCAAGGAGGAGCAGCGCGCCTACGAGGTGCTGAGGGCGGCCTCAGAGAACTCG  1032

Query 1210  CAGGACGCGCTCCGCGTGGTCAGCACCAGCGGGGAGCAGATGAAGGTGTACAAGTGCGAACACTGCCGGGTGCT  1283
            |||||.||..||||.|||||||||||.||.||.||||||.||||||||||||||||||||||||||||.|||||
Sbjct 1033  CAGGATGCCTTCCGTGTGGTCAGCACGAGTGGCGAGCAGCTGAAGGTGTACAAGTGCGAACACTGCCGCGTGCT  1106

Query 1284  CTTCCTGGATCACGTCATGTACACCATCCACATGGGCTGCCACGGCTTCCGTGATCCTTTTGAGTGCAACATGT  1357
            |||||||||||||||||||||.|||||.||||||||||||||.|||||.||.|||||.||||||||.|||||||
Sbjct 1107  CTTCCTGGATCACGTCATGTATACCATTCACATGGGCTGCCATGGCTTTCGGGATCCCTTTGAGTGTAACATGT  1180

Query 1358  GCGGCTACCACAGCCAGGACCGGTACGAGTTCTCGTCGCACATAACGCGAGGGGAGCACCGCTTCCACATGAGC  1431
            |.||.||.||||||||||||.|||||||||||||.||.||.||.|||||.||||||||.||.|.||||.|||||
Sbjct 1181  GTGGTTATCACAGCCAGGACAGGTACGAGTTCTCATCCCATATCACGCGGGGGGAGCATCGTTACCACCTGAGC  1254