Nucleotide Global Alignment

Description

Query:
ccsbBroad304_11616
Subject:
NR_022006.1
Aligned Length:
4324
Identities:
173
Gaps:
4130

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCATCTCATCTCAGATGCCTGGCAACATCTAATTCCTCAGCTCCTTTTCAGTAATTTCAGTTCTATTTTCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTCTATCATTCTGGTGTTTTCATTGCATTTTCTTATAAAAGAGATCCAGATTTATTTTGGAAATAGATTTGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGACGAAAACATCCTATAGAAGCAAATCCTAAACAAATATAAATATTTGACCATGATTATGCAAAGAAAGCTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTTCCTCCTCTGTGTCACAGAGACCCTCGGGAGGAACTCCAGGGAGAATGGAAGCTTGGGAGTCATCCCAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTTGCTCAGGTGCGAAATCCCCTGCCCTCTGCCTGGCACTGATAGGGACGGATCAGTTTCTCTGCCTGGAGAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCAGCCTCCTGTGACCTGGATACATTGGAGCCTGAACACGGGAACAGAAGGGTCTCTGGGAATCCAATCTCAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGTTGGGCTTACAAAGTGACCAAAGTCAAATGCTGGTCTGTGAGAGAAAGAGGAGGCAGACACATCGGGGGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGAGAAATACTTTGAAGCACCCCGCTCACCATGGTATGGGGAAGAATTTGGCCACATCCCTGCCAACTGCTGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTTGGACTGGGAAAGGGTCAGTTGCTTGTTTCTATCAGATTCATGGACACCACCAAGAAAAGAGGCCAGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGACATTCAATATTTGTTGAAACACAGAGGTTTAACTGATCATTGAGGTACACAGGGTGATAGGAAGAGTAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAACTTGAGAATCTGATGGATTTTGTTTAAAGTTAGGACTAGGCTACTGACTACCCACCCTGCTAATTGTCTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGGAAGTTATTTAACCTCTCTGAACCTCAGCTTCTCATCCACAAAATAGGACACTAGCACACAGTGGGCTATCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATATATTTATTGAATTGAAATGGGAGTATTCAAAATTATTTGGGTTGTTGGCTTAAAATAAGCAGAATAATT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAATTCCTGTTCATCTGGAATCTAATTGTCCAATTTGGAGTTTCAGATGTAACAAAGATCCTAATGACCTAATA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTATTGGGGTAATCCTAAAATTTATTAGGTGATCTGCAAGTTCCATGATGATTGTATACTGGAGGAAATGCACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGCACACAGACCTTCCTAGGAGTAAAAGACTGATGTGAATTTGCAGCACTACTTAATTATAAGTAATTGTTGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATGAACACACACACAAACACACACCCACAGAACTCACACTATAAGATAGGAGGGGCAAATAATGACATTTGACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAAATGAGCTCTTGCAGAGCTCAACGAGTCTAAGTTTCCTCCCTAATATCTTAACAGGCTACAGTATACACAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTTTTAAGTAATGTACTTGTTATCCAAACACTAGCAGACATTTAACTGGAATCCAGGAGCATTTTGTCAAGAAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAAAGAACTAACCAAAGAAAAAGAAAAGTAGAGAGTTTCCCAGCTGTTTTACCACATCACAACTTCAAAAAAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCAAGCCTGTCCTTGCCTTGTCCCTGATGGCTCTGCCAGCAGAGTGAATGAATTGGAGCAGATTTAGGTTTTAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AATGCCTCCTAATATCATTTGGGCAGATTAGCTTACATGGCTGGACATTGTGCTCCCAGCCACAGGGAATGTTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTTTCCTGTTGGAAGCTCTGACAGCCACTGCCACGGTGAAATATCAGGAGCCTCCTAACATTTTTCTTGATTTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTAAGAGTGAACATTAGACATATTAAAAACAACAACCCAATCATTAAGCCCTGTGAGGTTTTCCTAGGAGCCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCTCTATCGCTTTAATCAGATTACGGACAACTCATTCTCATCCCAGCCATTTATCTTCTTTGTTTACACACACA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAAGTGGCATTCTTCTTAGCATCAAAAAATAGTAATCAAAATTGAGAACAACAAAAGACCTTTCATTATTTAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGTGTTAAGTAACATCTATTTGCCTTCATTAGTTTCTAAACAACGAAGTACACTGGTTCTGATTAAAGCTGGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTGTTAATTATATCCGAGGTCTGGGATTGTTTTGTCTACAATAAAGGATTGCTGAAAGCTGAAATTTGAGGCG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCCAGGCCCCAGAAATCACCTGCCTCTATGTGTTTCCTCAGTGAGAGTTTCCAGCCTGAGAATGGCAGAAGCGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATGTGAGCTTGTCACAGAAAGTTTTTTTTGCTTTGTTTTGTTTTGTTTGGTTTTTAAGCCCTCGGTTTTATTGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCATTTTATGGGCTGGAGTTAAATGGAAGTACAATGCAGTTTGCTGTCTTACTGCTCAGCACTAACAGCCATGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGAGCCATAATTAGAAGTAAAACCACCACATAAATAACATGGTAGAAAAATTGCCACAGTGAGAAGCCAGACTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGGCGACGGGAAACTTCAGCGGGTCTTGAGTATCCATCATACTTAAGGGGCACCGCGTATTTTAGCCCATATTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTCTTACTAAAGCCAAAATGGGAGCCATTTAGACTTTCGAACAAGCTTTTAAAAATAGAGAATGTAGGCTTAAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGACTGCCTGCTGCTAAGTGTGATGAAGAAACCTGTCACCTGGAGGCTACGACAGCTGGAAGGGCTGGGAGGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGAGCCCTGGGAGCCCAGGGGTGAGGAAGGGAAGATAAACAGGAGAGGAAGAGGAGGCCTGGACTCTCCACAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCAAGGTCTAGACATTTCACTGCAAAGCCTAAGAGTCTGCACACCGTTGAGCACAGCAGCTTAGACTTCCGCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGGGAACGTGTGAGGCTGGGACGCCTTGCAGATTTTGCTTTCATGACCTGTACTCAGCGATGAAGTGGGAGCAG  2812

Query    1  --------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTT  48
                                      |||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 2813  GTAGACTAGTTTTTTTTTTTTTTTTAATGGAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTC  2886

Query   49  GGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG  122
            ||.|||||||||||||||||.||...||||||||.|||||||..||||||||.||..|||||||||||||||||
Sbjct 2887  GGTTCACTGCAACCTCTGCCACCCATGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAG  2960

Query  123  ACGTG--TGCCACCATAC--CTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGT  192
              |||  ||||||  |.|  ||||.|||||||||.|||||||||.||||.||.||||||||||.|||||||||.
Sbjct 2961  --GTGCCTGCCAC--TGCGTCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGGC  3030

Query  193  TGGTCT--------------------------------------------------------------------  198
            ||||||                                                                    
Sbjct 3031  TGGTCTTGAACTCCTGACCTTGTGGTCCACCCGCCTCGGCCTCCCAAAATCCTGGGATTACATGCATGAGCCAC  3104

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3105  GCGCCCAGCCTAGACTAGCATTTTTGAGTACCCACTATCTCCTTGGCATTTTACTTCCATTTTAATTCTCATAA  3178

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3179  CAGCCTTAGGACGCCAATGAAAAGGAAGAGAAAATAAAGTGTGTTCTGTGCCTGAAAATGGCCTTAAAGAAACA  3252

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3253  AGGACCAACAGCTGGAGCAGAGTGGGGCTGCCCATACGCAAAGAGACAACAAGTAGGAATTAACATAAGGCATA  3326

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3327  TCACGTGGATGCCATAGAACTATCACAGCAATTTCTTTTTTCCCCAAGTCAGCCTCTCTTGTACAGGGGATTAG  3400

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3401  AAAACAAACCCAAGAGAATAAACTTGAAATGGAAGGAACGTGCTTTGTAGTCGAGTGTTTTTCAAAGCCTGCAT  3474

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3475  CATTTTAAAAACTGATTTAAGTATATTCATTTGCTTTCTAAAATAAGTCATATGTATGTTTCTACTGATCGGCC  3548

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3549  AGAATAGTTAAGGTCTGTCTGATCTTCATATGGAATGAAAGGGGACATTCTTTGGATATTCTGGAAGTCCACAC  3622

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3623  GTGTTCTTTACAGAGTTTGGTTTGCTTTCTCCGTTTCTTCCTTCCTTTGCAAAATCAAACAAACAGGAATAAAA  3696

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3697  ACCAAACCAAAACAAAATTAATGAAAACCCTTGTGTTGAGGACTTTGTTTTGTTTTAAATGTGTCTGGTATTAA  3770

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3771  GCAGTATGTTTAGTGAAATGACTTTAAACTTAAGTAGGAAATACAGCTCCATTTCACACGTGGATTTTGTCTGC  3844

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3845  ATTTACATCTCTGCAGGCCTCACATGCCGTGACACCAGACATTTTTTTAATTAAGATATGAAGTGCTCATTTTT  3918

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3919  TTTTTGTGGAACTGCTGTATTCTAACAAATTTACTACACGTCTCAGAAAACACATAGCTTTGCCAAAGTTGGTG  3992

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 3993  AGTAGCCCAGCATGGTTTATCTCCAGCCCACAGCTCTTTCCCTGAATTCAATACTGCAGGCACAATTTAATGCA  4066

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4067  AACCCAATTTATGACTTAATGCTCTAGGGACCGTAGTGGGAGATTGTTACATTATTCTTTTCTAATCCTATTTG  4140

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4141  TGTTTTAATTTGCTAAGTCTGTAATGAGGTGCATGCCTTGAATATTCAAGATCTTTGACATTGCTTTTGACTTT  4214

Query  199  --------------------------------------------------------------------------  198
                                                                                      
Sbjct 4215  GTTTAATATAATAGATTTTACAGTTTGCATTAAATACCCAGGTGCTTCGGTCAGTATTATCTCTTTATTTTCTC  4288

Query  199  --------------------------------  198
                                            
Sbjct 4289  AACTAGAGTGAATAAAATTACACGATGAAAGT  4320

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