Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_11616
- Subject:
- NR_022006.1
- Aligned Length:
- 4324
- Identities:
- 173
- Gaps:
- 4130
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCATCTCATCTCAGATGCCTGGCAACATCTAATTCCTCAGCTCCTTTTCAGTAATTTCAGTTCTATTTTCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCTATCATTCTGGTGTTTTCATTGCATTTTCTTATAAAAGAGATCCAGATTTATTTTGGAAATAGATTTGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACGAAAACATCCTATAGAAGCAAATCCTAAACAAATATAAATATTTGACCATGATTATGCAAAGAAAGCTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTTCCTCCTCTGTGTCACAGAGACCCTCGGGAGGAACTCCAGGGAGAATGGAAGCTTGGGAGTCATCCCAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTTGCTCAGGTGCGAAATCCCCTGCCCTCTGCCTGGCACTGATAGGGACGGATCAGTTTCTCTGCCTGGAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGCCTCCTGTGACCTGGATACATTGGAGCCTGAACACGGGAACAGAAGGGTCTCTGGGAATCCAATCTCAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTTGGGCTTACAAAGTGACCAAAGTCAAATGCTGGTCTGTGAGAGAAAGAGGAGGCAGACACATCGGGGGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAGAAATACTTTGAAGCACCCCGCTCACCATGGTATGGGGAAGAATTTGGCCACATCCCTGCCAACTGCTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTTGGACTGGGAAAGGGTCAGTTGCTTGTTTCTATCAGATTCATGGACACCACCAAGAAAAGAGGCCAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGACATTCAATATTTGTTGAAACACAGAGGTTTAACTGATCATTGAGGTACACAGGGTGATAGGAAGAGTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAACTTGAGAATCTGATGGATTTTGTTTAAAGTTAGGACTAGGCTACTGACTACCCACCCTGCTAATTGTCTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGAAGTTATTTAACCTCTCTGAACCTCAGCTTCTCATCCACAAAATAGGACACTAGCACACAGTGGGCTATCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATATATTTATTGAATTGAAATGGGAGTATTCAAAATTATTTGGGTTGTTGGCTTAAAATAAGCAGAATAATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATTCCTGTTCATCTGGAATCTAATTGTCCAATTTGGAGTTTCAGATGTAACAAAGATCCTAATGACCTAATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTATTGGGGTAATCCTAAAATTTATTAGGTGATCTGCAAGTTCCATGATGATTGTATACTGGAGGAAATGCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGCACACAGACCTTCCTAGGAGTAAAAGACTGATGTGAATTTGCAGCACTACTTAATTATAAGTAATTGTTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGAACACACACACAAACACACACCCACAGAACTCACACTATAAGATAGGAGGGGCAAATAATGACATTTGACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAATGAGCTCTTGCAGAGCTCAACGAGTCTAAGTTTCCTCCCTAATATCTTAACAGGCTACAGTATACACAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTAAGTAATGTACTTGTTATCCAAACACTAGCAGACATTTAACTGGAATCCAGGAGCATTTTGTCAAGAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAAAGAACTAACCAAAGAAAAAGAAAAGTAGAGAGTTTCCCAGCTGTTTTACCACATCACAACTTCAAAAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAGCCTGTCCTTGCCTTGTCCCTGATGGCTCTGCCAGCAGAGTGAATGAATTGGAGCAGATTTAGGTTTTAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATGCCTCCTAATATCATTTGGGCAGATTAGCTTACATGGCTGGACATTGTGCTCCCAGCCACAGGGAATGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTCCTGTTGGAAGCTCTGACAGCCACTGCCACGGTGAAATATCAGGAGCCTCCTAACATTTTTCTTGATTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTAAGAGTGAACATTAGACATATTAAAAACAACAACCCAATCATTAAGCCCTGTGAGGTTTTCCTAGGAGCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTCTATCGCTTTAATCAGATTACGGACAACTCATTCTCATCCCAGCCATTTATCTTCTTTGTTTACACACACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAAGTGGCATTCTTCTTAGCATCAAAAAATAGTAATCAAAATTGAGAACAACAAAAGACCTTTCATTATTTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGTGTTAAGTAACATCTATTTGCCTTCATTAGTTTCTAAACAACGAAGTACACTGGTTCTGATTAAAGCTGGCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTGTTAATTATATCCGAGGTCTGGGATTGTTTTGTCTACAATAAAGGATTGCTGAAAGCTGAAATTTGAGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCAGGCCCCAGAAATCACCTGCCTCTATGTGTTTCCTCAGTGAGAGTTTCCAGCCTGAGAATGGCAGAAGCGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTGAGCTTGTCACAGAAAGTTTTTTTTGCTTTGTTTTGTTTTGTTTGGTTTTTAAGCCCTCGGTTTTATTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCATTTTATGGGCTGGAGTTAAATGGAAGTACAATGCAGTTTGCTGTCTTACTGCTCAGCACTAACAGCCATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAGCCATAATTAGAAGTAAAACCACCACATAAATAACATGGTAGAAAAATTGCCACAGTGAGAAGCCAGACTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGCGACGGGAAACTTCAGCGGGTCTTGAGTATCCATCATACTTAAGGGGCACCGCGTATTTTAGCCCATATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTCTTACTAAAGCCAAAATGGGAGCCATTTAGACTTTCGAACAAGCTTTTAAAAATAGAGAATGTAGGCTTAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGACTGCCTGCTGCTAAGTGTGATGAAGAAACCTGTCACCTGGAGGCTACGACAGCTGGAAGGGCTGGGAGGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGAGCCCTGGGAGCCCAGGGGTGAGGAAGGGAAGATAAACAGGAGAGGAAGAGGAGGCCTGGACTCTCCACAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCAAGGTCTAGACATTTCACTGCAAAGCCTAAGAGTCTGCACACCGTTGAGCACAGCAGCTTAGACTTCCGCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGGAACGTGTGAGGCTGGGACGCCTTGCAGATTTTGCTTTCATGACCTGTACTCAGCGATGAAGTGGGAGCAG 2812
Query 1 --------------------------ATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTT 48
|||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 2813 GTAGACTAGTTTTTTTTTTTTTTTTAATGGAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTC 2886
Query 49 GGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAG 122
||.|||||||||||||||||.||...||||||||.|||||||..||||||||.||..|||||||||||||||||
Sbjct 2887 GGTTCACTGCAACCTCTGCCACCCATGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAG 2960
Query 123 ACGTG--TGCCACCATAC--CTGGGTAATTTTTGCATTTTTAGTGGAGAGGGAGTTTCACCATGTTGGCCAGGT 192
||| |||||| |.| ||||.|||||||||.|||||||||.||||.||.||||||||||.|||||||||.
Sbjct 2961 --GTGCCTGCCAC--TGCGTCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGGC 3030
Query 193 TGGTCT-------------------------------------------------------------------- 198
||||||
Sbjct 3031 TGGTCTTGAACTCCTGACCTTGTGGTCCACCCGCCTCGGCCTCCCAAAATCCTGGGATTACATGCATGAGCCAC 3104
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3105 GCGCCCAGCCTAGACTAGCATTTTTGAGTACCCACTATCTCCTTGGCATTTTACTTCCATTTTAATTCTCATAA 3178
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3179 CAGCCTTAGGACGCCAATGAAAAGGAAGAGAAAATAAAGTGTGTTCTGTGCCTGAAAATGGCCTTAAAGAAACA 3252
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3253 AGGACCAACAGCTGGAGCAGAGTGGGGCTGCCCATACGCAAAGAGACAACAAGTAGGAATTAACATAAGGCATA 3326
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3327 TCACGTGGATGCCATAGAACTATCACAGCAATTTCTTTTTTCCCCAAGTCAGCCTCTCTTGTACAGGGGATTAG 3400
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3401 AAAACAAACCCAAGAGAATAAACTTGAAATGGAAGGAACGTGCTTTGTAGTCGAGTGTTTTTCAAAGCCTGCAT 3474
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3475 CATTTTAAAAACTGATTTAAGTATATTCATTTGCTTTCTAAAATAAGTCATATGTATGTTTCTACTGATCGGCC 3548
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3549 AGAATAGTTAAGGTCTGTCTGATCTTCATATGGAATGAAAGGGGACATTCTTTGGATATTCTGGAAGTCCACAC 3622
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3623 GTGTTCTTTACAGAGTTTGGTTTGCTTTCTCCGTTTCTTCCTTCCTTTGCAAAATCAAACAAACAGGAATAAAA 3696
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3697 ACCAAACCAAAACAAAATTAATGAAAACCCTTGTGTTGAGGACTTTGTTTTGTTTTAAATGTGTCTGGTATTAA 3770
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3771 GCAGTATGTTTAGTGAAATGACTTTAAACTTAAGTAGGAAATACAGCTCCATTTCACACGTGGATTTTGTCTGC 3844
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3845 ATTTACATCTCTGCAGGCCTCACATGCCGTGACACCAGACATTTTTTTAATTAAGATATGAAGTGCTCATTTTT 3918
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3919 TTTTTGTGGAACTGCTGTATTCTAACAAATTTACTACACGTCTCAGAAAACACATAGCTTTGCCAAAGTTGGTG 3992
Query 199 -------------------------------------------------------------------------- 198
Sbjct 3993 AGTAGCCCAGCATGGTTTATCTCCAGCCCACAGCTCTTTCCCTGAATTCAATACTGCAGGCACAATTTAATGCA 4066
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4067 AACCCAATTTATGACTTAATGCTCTAGGGACCGTAGTGGGAGATTGTTACATTATTCTTTTCTAATCCTATTTG 4140
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4141 TGTTTTAATTTGCTAAGTCTGTAATGAGGTGCATGCCTTGAATATTCAAGATCTTTGACATTGCTTTTGACTTT 4214
Query 199 -------------------------------------------------------------------------- 198
Sbjct 4215 GTTTAATATAATAGATTTTACAGTTTGCATTAAATACCCAGGTGCTTCGGTCAGTATTATCTCTTTATTTTCTC 4288
Query 199 -------------------------------- 198
Sbjct 4289 AACTAGAGTGAATAAAATTACACGATGAAAGT 4320
