Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12038
- Subject:
- XR_001744739.2
- Aligned Length:
- 2404
- Identities:
- 237
- Gaps:
- 2167
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AACATGGAAGGGGTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCT 814
Query 1 ----------------------------------------------------------------ATGGGTGGAA 10
||||||||||
Sbjct 815 GGCCTCTGCTGTGGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAA 888
Query 11 GAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAG 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGAGCAACGCCAGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAG 962
Query 85 CTCCACGACCACGCTGCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGG 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCCACGACCACGCTGCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGG 1036
Query 159 TCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCC 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTGACAAGCCTGCTGCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCC 1110
Query 233 TAGGG--------------------------------------------------------------------- 237
|||||
Sbjct 1111 TAGGGTGAAACCAGGAGAGATTGCTTGCTTCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTT 1184
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1185 GGAGTTGGAAGGTGGCTAATCTTTGATTCTATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAG 1258
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1259 GAGAGCACACTGATAGAAATCCTTGTGTCCAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACT 1332
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1333 ACAGGCGCCCGCCACCACGCCTGGCTAACTTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAG 1406
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1407 GATGGTCTTGATCTCTTGACCTTGTGATCCACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCC 1480
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1481 ACTGCGCCCAGCATGTTAGACAATTTTTAATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATA 1554
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1555 TTCTGGTGGGGACAAGGTTACAGAGTTGCTGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCC 1628
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1629 TGGGGGGGCGGGGACTCCGCACATGCCTGTGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTT 1702
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1703 TCCTGTTGACTTTCCCACACTCCTGTAACCCTCCCTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCAC 1776
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1777 ACGCACACACACACACACACACACACACACACACACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACG 1850
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1851 TCTCGAGTTGCCATTGGAAGCCCCATTGTCCTCATTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCT 1924
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1925 GTCCCCCAGGCTGGAGTGCAGTGGTGCGATCTCAGCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTC 1998
Query 238 -------------------------------------------------------------------------- 237
Sbjct 1999 CTGCCTCACCCTCCTGAGTAGCTGTGATCATAGGTGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGT 2072
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2073 AGAGACAGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCT 2146
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2147 CCCAAAGTGCTGGGATTACAGGAGTGAGCCACCATGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTT 2220
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2221 ATAGGCACTTTTGACTTCCTGGGGTCCTTCTTCAGTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGG 2294
Query 238 -------------------------------------------------------------------------- 237
Sbjct 2295 CACATGCCTGTAATCCCAGCACTTTATGAGGCCGAGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGC 2368
Query 238 ------------------------------------ 237
Sbjct 2369 CTGACCAATGTGGAGAAACCCCGTCCCTACTAAAAA 2404
