Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13656
- Subject:
- NR_146079.1
- Aligned Length:
- 2918
- Identities:
- 794
- Gaps:
- 2123
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCCGGGGCCCGAAGTTGTTTTCCGAGGCGCGGCGGCGAGGACAGCGGCCCGGGGTGCGCCCCCTTTGTCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCGGCCGGCGCCGCGTCCCCGCGCGCTTACCTGGTCTTGGAGGACAGGAAGAGACGGGGTTTCGCCATGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAGCTGCCCGCCTCAGCCTCCCAAAATTCTGGGATTACAGTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTGCTGATCTTGATCTCGTGATCTGCCTACCTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTCCCAGAGTGCTGGGATTACAGGCGTCAGCCACCGCACCTGACCAGGAGTGGATTTTATATCTAAAGCTACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTTAAACCACAAGGGCATCTGCTAAATACCACCCAAGGAGAAGCTAAGTTGTCAAAATGCCCACTCAACCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAACATCGCAAACCCACCCTTTTCTGATCTCTACTCCAACGTCTTTTGTTTTTGTTCTGTCTTACACCAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGAGAGAGATTCGTGTTGACAAGTCCTTGTTGTCCAGACTCACACGGATACAGCTGTGGGGAAGGAAGGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTGCAATGCTGCTGTTTCCATGAACATGCCTGGCACCCTCCAGGTGTCAGCAGGGCCAGGGGAGTGGAGAACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGTCTCCCTCTCCGCTCCTCTACAGAACACAGTAGTACTGGACTCTGAAACGGGCATGTACAGAGAAGAGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCCAACACGCTTCAAGCTTTGAGTGGAGAGGACACAGCCTCTGCTGGGACAGGGAACAGAGGGATGCGGAGAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTGAAGATGCTTTTGGACAGTGGTCTGAGGTTGGGACAGTGGCAGGAGATACCATTCACCCAGGATCTCCAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACAAGAGATCAGCCTGGCAGTTACATGTGTTTTTTTTCAAACTGGTTGCCAGGTTGGCATGAGCGATGACATCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGATTCCGACCTTCCTGATTGGAGGGACCGGACTCTGTCGGCACCTGGGAGTTCAGTTGGACAACAGTAACTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCAGAGCTGTTCTCCACTCCTGACTTCTCCCAGCCTCGAGAATTGATAACACACTCTTCTGGATCCCAGCAGT 1110
Query 1 ---------------------------------------------ATGGGACAGATTTTGGGAAAGATCATGAT 29
|||||||||||||||||||||||||||||
Sbjct 1111 GTCCAGAAGAAGACCAAGGACAGAACAGAGACTAGGTTTGGTGAGATGGGACAGATTTTGGGAAAGATCATGAT 1184
Query 30 GAGCCATCAACCGCAGCCCCAGGAAGAGCGGAGCCCCCAGCGGAGCACCTCAGGGTACCCCCTCCAGGAGGTGG 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAGCCATCAACCGCAGCCCCAGGAAGAGCGGAGCCCCCAGCGGAGCACCTCAGGGTACCCCCTCCAGGAGGTGG 1258
Query 104 TGGATGATGAAGTGTCGGGACCATCAGCCCCTGGGGTAGATCCCAGCCCCCCACGTAGGTCCCTTGGCTGGAAA 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGATGATGAAGTGTCGGGACCATCAGCCCCTGGGGTAGATCCCAGCCCCCCACGTAGGTCCCTTGGCTGGAAA 1332
Query 178 AGGAAGAGGGAATGTTTGGATGAATCTGATGATGAGCCAGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTG 251
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGGAAGAGAGAATGTTTGGATGAATCTGATGATGAGCCAGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTG 1406
Query 252 GGTGGCGGAGACGCTGTGTGGCCTCAAGATGAAGGCGAAGCGACGGCGAGTGTCGCTCGTGCTCCCTGAGTACT 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGTGGCGGAGACGCTGTGTGGCCTCAAGATGAAGGCGAAGCGACGGCGAGTGTCGCTCGTGCTCCCTGAGTACT 1480
Query 326 ACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGACTCCTGGCCTGGGACAAAGATCTGAGGGTG 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGACTCCTGGCCTGGGACAAAGATCTGAGGGTG 1554
Query 400 TCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCCTCCCCTCCTGGCAATACCAACG 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCCTCCCCTCCTGGCAATACCAACG 1628
Query 474 CATTCATTTCTTCCTGGCTCTCTATCTGGCCAATGACATGGAGGAGGACGACGAGGCCCCCAAACAAAACATCT 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATTCATTTCTTCCTGGCTCTCTATCTGGCCAATGACATGGAGGAGGACGACGAGGCCCCCAAACAAAACATCT 1702
Query 548 TCTACTTCCTGTACGAGGAGACCCGCTCTCATATACCCTTGCTCAGTGAGCTTTGGTTCCAGTTATGCCGTTAC 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCTACTTCCTGTACGAGGAGACCCGCTCTCATATACCCTTGCTCAGTGAGCTTTGGTTCCAGTTATGCCGTTAC 1776
Query 622 ATGAACCCGAGGGCCAGGAAGAACTGCTCTCAGATAGCCTTGTTCCGGAAGTATCGGTTCCACTTCTTTTGTTC 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATGAACCCGAGGGCCAGGAAGAACTGCTCTCAGATAGCCTTGTTCCGGAAGTATCGGTTCCACTTCTTTTGTTC 1850
Query 696 CATGCGCTGCAGGGCTTGGGTTTCCCTGGAGGAGTTGGAAGAGATCCAGGCTTATGACCCAGAGCACTGGGTGT 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CATGCGCTGCAGGGCTTGGGTTTCCCTGGAGGAGTTGGAAGAGATCCAGGCTTATGACCCAGAGCACTGGGTGT 1924
Query 770 GGGCGCGAGATCGCGCCCACCTTTCC------------------------------------------------ 795
||||||||||||||||||||||||||
Sbjct 1925 GGGCGCGAGATCGCGCCCACCTTTCCTAGAGCTCCAGGGACCGTGGAGGCCTGAGGTCATCGGCCTGAGAGAAG 1998
Query 796 -------------------------------------------------------------------------- 795
Sbjct 1999 AACACCGGACCCAGGGGAGATGTGGATTTTCAGCAGGAACTTTATTCCAATGCTAATGGCAGACATCAGGAAGG 2072
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2073 AGGAGAGGAACCATTTGTGCAGATCATCTAGAAGAACCTGGACCATTCTTGACAGAGCTGAATACAGTGATCAC 2146
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2147 GTTGTCCTCCAAGGAGCAGGGGTGGGGTGGGGTACTTCTAGGAGTCCTTGGAGAAAAGTAAGAAACCAGGAGTG 2220
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2221 TTTCCAGTTCCACCCTTTCCTGCGGCACCACCTCCCTTTTTATATTGCTGAATGCCAACCTCCCTGGGGCGGAA 2294
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2295 CCTGGAGGTCCTGTTTCTTATGGACTTGGTTGCCACAGTCCAGGAGCATTTGAAGGCACAGTGCAGGGGCTCAG 2368
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2369 ATTGGCACAGAATTCTTTGTGAAATATGAGTGCCACAGACTGTAACAGATAGCTTCATGCACACTATGCATTTT 2442
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2443 ATTGGTTTGTTTGGAAAATGTTGGCCATTGAATTATTAATAGGTTTATTTCAAATAGTTTGGAAATTGTTGTAC 2516
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2517 TTTTGAAAACATGCTGTTCCTGTAGAGTTTTTTGATGAGAGTTATAGTTGTTATATATACCTAAAGATAATTTT 2590
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2591 CTTTTCATTTTTAAGTGAGAATTCTTTTTATCCTAAATCTTTTATTATCTTTAAATTTTTTTCTGTATTATTAT 2664
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2665 ATGTGCTCCTGAAGCGAGCACTCTTTTTATCTATGATACTTCCATAATAATCTCTTCTATTTATAGCTATTGGT 2738
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2739 AGTTCCCCACCAGAAAAAAACATAATTCTGGTGATAGAAATTTTTATTTGCTGTTTAGGTTTGTGACTGACTTG 2812
Query 796 -------------------------------------------------------------------------- 795
Sbjct 2813 TGAGAATTCAGTTGTGATTTTTAACATGTCTCAGATATATATACTAACACGTCTAATATATACTATCTATTTTA 2886
Query 796 -------------------------------- 795
Sbjct 2887 TTGGTTTATTTTGAAAAACATGGGTATAGAAT 2918
