Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_002956440.1
- Aligned Length:
- 2257
- Identities:
- 221
- Gaps:
- 2022
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGGGATGTCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTTGGATGCAAAGCTACAGCACGTCTTTCCTCACC 518
Query 1 ----------------------------------ATG--CAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 38
||| .||||||||||||||||||||||||||||||||||
Sbjct 519 GACAGCTATTTAAAATATATTGGTTGGACTCTGCATGATAAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGC 592
Query 39 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGA 666
Query 113 TGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCT---- 182
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAA 740
Query 183 ----------------------TAAGAAC-----ATGGAAG------------------GGGTGCTGATGGACG 211
||||||| .|||||| .|||||..| |
Sbjct 741 CTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCCAGAGCCCAGGTGCCCA-----G 809
Query 212 TGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG-------------------------------------- 240
.|||| |.|...|||.|||.| || |.|||||
Sbjct 810 AGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGAATCGGCTCCCAGACACCTGCCACTCGTG 883
Query 241 -------------------------------------------------------------------------- 240
Sbjct 884 AATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGGCCCTGGCGGATCACGGGTGCCCAGGGGC 957
Query 241 -------------------------------------------------------------------------- 240
Sbjct 958 TCGGAGGCCGCCTCCTCTGGGAAGCCTGCCCAGGTTCCGCTGGACTCCCACAGGCAATACCCCTGGGCCTTCCT 1031
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1032 CGCGGCCCCTGTTGGCCCCAATTCCCCCACCCCCTGCAAGGTCTGTGCCTCTCCTGCAGCCCCGCCACCAACTA 1105
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1106 GGGCGAGAGGAGCTCGCCCCCACCCAAACGTATTGGTTCGATGAAGGAAGGGCCCATGGTTCTGCCACTGGCCC 1179
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1180 TGGACACCCAGTGCTGGTTTCCCGTGGAAGTCCCCCTGGACTGAGTGGCGGCTGGGTGCTCTAGTGATTTGCGA 1253
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1254 CCTGGGGCCTCTGACTCCCATCATGTTGGGAAAGTCGTTGAACCTCACCGGTGAAACGGGCACAGTGAAGTCAT 1327
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1328 TTCCCCGAAGTCTCAGGACTCTGTAATCCCCAGGACTCCCTAGGGAAGGAGGTCCCAGCCTGGCCTCCCAAGAC 1401
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1402 CGTGCTTGCCCAATTCCAGGACTTCCTCACATGGCTCCTACCTCCAGCACAGAAGCGGCACTAAACCAGGTGGT 1475
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1476 CAATCAGGGAGCACCACCGAGGTTCTGAATGGTCCAGGGATGAGCAGTGATGCCTCAAGCTAAGCCAATCAAAG 1549
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1550 CCTTCCCTGGGATTGTCTCAAGGAGTCCGCAGTGAGATTCTGGGTCTCAGTACTGGGAAAGGGTGAGGCTGAGG 1623
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1624 CTGCCTGCTGTCCTGGGGGCCTCACCCTGCCACCAACAGGAAGCCACACAGAGGGAAGCAGAAATGAGACGCAG 1697
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1698 CCAGTGAGGGCAGGGTACAAAGGTGAGATCCCGGAGAGACAGATGCTGGGACATCATCCTTGGGTACTGGTTCC 1771
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1772 AACAGTGCCTGCAGATGGAGCCACCCTCGGAGAGTCCACAACAGCAGCCAATCCATTCTATGCGTGTCTGAGCT 1845
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1846 ACTTTAAGTCGGGTTTTTGACTGTTTGAATGAGAGTCTCATCTTGGCTAGGCACCATGGCGCAACAACTGGGGA 1919
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1920 GGTGGAGGTAGGAAGATTGCTTGAGGCCAAGAGTCCCAGAGCAGCCTGGGCAACCTATCAAGACGCTGTCTTTA 1993
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1994 CGAAAAGAAAAAAAACTAGCTAGGTGTGGTGGTGCGTGCCTGTGGTCCCAGCTACTGGGGAGGCTGAGGTGGGA 2067
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2068 GGATTGCTTGAGCCCAGGAAGTGGAGGCTGCAGTGACCTATGATGGCACCACTGTACTCCAGCCTGGGTGACAG 2141
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2142 AGCAAGACCCTGTCTAAAAAAAAAAAAAAAAAAAAGAAGTCCCACCGAATACCTTCATGCAGTGAAGGTCACCC 2215
Query 241 ------------------------------------- 240
Sbjct 2216 CATCTGAAAAATAAAGCCTGGGCACTTGGGCTTGGTA 2252
