Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13781
- Subject:
- XR_929049.2
- Aligned Length:
- 3424
- Identities:
- 245
- Gaps:
- 3144
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCTCAGGTGATCTGCCTACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACTGTACCCGGCCTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAATTCTTTTTAGCAAATAAAGTTGTCATTGACACCTAAACCTGGTAAAGACAGTACAGAAAAGGAAGTTGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTAATACCAATATAAATATAGAAGAAAAAAATGAGCAAATAAAATCTAATATGAAATTAGTAATAATATATAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCTAAAAATTTATGTTGAATTTAATTCATTCATTTGAATACGTTTATTGCTATAACTGTTGAAGGTTATGAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCTCCTTCGACCATTGTTTTACATTTGTACTATAGTTTCTGCTATGTAGTATTTTTATTATTCTTTCAGTATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATTTTCTAGTTTGTATTTTCCCTTTCATGTACAAATTACTTAATAAAAGGTTTATTTTTCAAGTAGAAGGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTTGCTTTTTAAAATTTTGTTATTAATTTCTAGTTTGTTATATTTTGATTTGAGACTGTAATATCTCCACCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGCACTTCCTTATGCTTTCTTTGAGATCAAATGGAGGATCATATGTACACACATATACAGCATAACATCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTAAGAGTTTGTTGCTTTGGTCTTTTATATGTTTTTTTGTCCACTTGATCTGTGTTGTACTGAGAGTGATGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTAAAATCTCTTAGTATTTGTGTGCTTCTGTTTATATCTCCTTGCATCTCCTGTAGTTTTTGGCTTCAGGTGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTGCATTATTTGGTGCATAGGTATTCATAACTGTTATATATCACTGAAGAATTGCAGGTTTTAGCATTAATA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTAGTGTTCGCCATTAATACCTTTTTGCTTGAACTCTGCTTTGTCTGATATCAGCATAACAATCACTGCTTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGTTTTCATTAAGCTAGTACAACTTTTTAGCTTTTCTCTGTTTTTGGTGTCTCTTGTATGTAGTGTATATTTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCTTGTTTTATGAGACAAATTTAAAATCTTTTTTGTTTAAGCCTGAAATGTATTTGAGTTGAGAAATAAAGGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGATTTTGATTTGGCATTTGGTTGACAGCGGGTGTTTACCATAAATTAAATGAGCTGTTTGCAGCTCTACCATT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGGGTAAAATATATTTGAAGTGTATGATAAGATCAAAACATTTTATAAAACAAATGTTATTTCAGCAAAAGGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTGGAATTAACAATATTTTGATGTTTTCTACCCTTTTGGACTATATAAAATTAAACTGCTAAGGGAAACAATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAGGTATAATTCATAATCATTTGATAAGTCATAGTAATACTGTTTTGGAATATTTCCCAGAAATGGAGAATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAATAATTGTAGCAAATGTGTAATGCATCCTTTGTAAGTCAGGTAGTTTCTGGTTACTTGCTTTCAGCAAATTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGAGAGGACTTAACATCAATTGCCACGTCATTAAAAATAATTTCTGATGGTAGATCACAGTGTGTGTTTTGGCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGAAAAAATTGAGTGACCTTGTTATAACAAAACTCAGAGTGATTTAGTTTTTAATGTGAATTACATTTCTTAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGATTATACCTGAAATAAGTGAAATAAGAGTAGAATTGAGAACTTATCTCATTTTAGCAGTAAGAAATATTCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTAGATACATCAATATAAAGAAAAAAAGCTCTGTAAATGTCAGTGAGTTTCATGTCCATTAATATTTTACTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTGTTTAAAAATTATGTGGCCTGGCACGGTGACTCATGCCTGTAATCCCAGCACTTCGGGAGACTGAGGCGGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGGATCACAAGATGAAGAGTTACCTAAGTCAGTGTTATAAGATGTTCCATGGTAAAAGGGATTTGAAGACAAAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGGTGTCATGAAGAAAACTGTTTACCTAAGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTCCTAACACTGACTGAACATCAGGCTTTCCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TAATTAAATCAGAATTTCTGGTTGCAGAGCTTGAACCGCACTGTTTTTTAAAACTTCCCCAAGTAATTCTATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCAGTCATTTAAATACTGGTCCCCACAACCCAAAACACATTACCCTCTATTAACATCAAAGATTATGAGATGGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGAATAGTCATAGAACTTTTGAAAGAAGTAAAGAAGAAGGGAAGAATTACAGTTAACCACACTCCTTAAGGAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AATTGTTCTGGACAGCTAGCTTCCCCACATTGCTGAGGGTTCACTTTTTTTTGGAACCTAAAACTTTACTTAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCAGTAATTTTGGATAGAAATATTTCTAAAAGTTATGGCATATATTTTTTATATCCTTAAATAGAAAATGCCAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATTCTTAGCATGAAGAATCCTTGCTGTTGACTCATTATCAACCTTATAAACAATAAGTATTACAAGCCTCATG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGATATGTACATGGTTTGTCCTTATACCAGATAATCCTAGACATCTGTTTCTAGAGTACCCAAGTGTGCTTTTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTTACTTTCCAAATCATTGTTGTCAGTCAGATTGTCATCTTATTTCTTGTTTTTGTCAGTGCACCTTTGCATAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGCTTGCTCCTTTCTTTGATGCTTTTCAATTGCTATTATCTTGAAAACCGATATTATTGTTTGAATTTGGGGCA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAGTAAGAGTAGCAGGGCTTTAATTACGCCCTAAGATGTCCCCTTAACTGTGGAAAACATCGAGTTTTATCTAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGGTGAATTTTTTTACTTCAGAATTTATTTTTTTCTGTCATAAATTTTGCTAAGGATCTGCATTTTGAGTAGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGAAGTGGCCAGATAGTTGAATAATGGTTTGGTGAATATCTATATGTATATATGTATGTGTATGTGTGTTACA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CATACATATTTAATGACATGAAGTACTTTGGTTGCTTGGAATTGGACAGAAATAACAGTTTTTTTTTTTTTTTG 2960
Query 1 --ATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAATGGCGCGATCTCCACTCACTGCAACCTCTGCGTACC 72
|..||||||||||||||||||.||||||||||||||||||||||||||..|||||||||||.||..|.|.||
Sbjct 2961 GGACAGAGTCTTGCTCTGTCACCTAGGCTGGAGTGCAATGGCGCGATCTCTGCTCACTGCAACTTCCACCTCCC 3034
Query 73 AGGTTCAAGCGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGATTACAGG------------TGCCCACCACC 134
|||||||||.||||||||||.|.||||||||.||||||||||||||.|||| |||||.|||.|
Sbjct 3035 AGGTTCAAGTGATTCTCCTGCCGCAGCCTCCCGAGTAGCTGGGATTGCAGGCGCCTGCCAGCATGCCCGCCAGC 3108
Query 135 ACAGCTGGCTAA------TTTTTGTATTTTTAGTAGAGACTGGGTTTTACCATATTGGCCAGACTGGTC-TCGA 201
||..|||||||| |||||||||||||||||||||..||||||.||.||.||||||||.|||||| |.||
Sbjct 3109 ACGCCTGGCTAATTTTTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCTTGGA 3182
Query 202 ACTCCTGACCTCAGGTGGTCCGCCTGCCTTGGCTTCCCAAAGTGCTGGGATTATAGGAGTGAGCCACTGCGCCT 275
||||||||.||| |||.||.|..|||||||||.|||||||||||||||||||.|||.|||||||||.||||||
Sbjct 3183 ACTCCTGATCTC--GTGATCTGTGTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCT 3254
Query 276 GGCCA----------TT--------------------------------------------------------- 282
||||| ||
Sbjct 3255 GGCCAGAAATAACAGTTTTAATAAATTTCATGAAATCACTTTCTTGTATGTTAAAGGAAACAGAAAGGGTTCAT 3328
Query 283 -------------------------------------------------------------------------- 282
Sbjct 3329 TTGTGCATGGTTTAGTCTTTCTTTTGAATGTGGAAGTTTTTCTTCTTATTTGTGTGTCTAAAAAAATTAAAAAG 3402
Query 283 -------------------- 282
Sbjct 3403 TGAAACATTTTCCAAAATGA 3422
