Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13811
• Subject: NM_001290058.2
• Aligned Length: 1073
• Identities: 627
• Gaps: 404

Alignment

Query    1  ATGGA-CCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACACGGCCAGCTGAGTT  73
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct    1  ATGGACCCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACGCGGCCAGCTGAGTT  74

Query   74  CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC  148

Query  148  AGGACCTGCACAAGTCAGCCTTCGAGTCGGAGGTGTCTGAGGTTGCCATCAGCCAGGGCGAGGTCACCCTGGCC  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGACCTGCACAAGTCAGCCTTCGAGTCGGAGGTGTCTGAGGTTGCCATCAGCCAGGGCGAGGTCACCCTGGCC  222

Query  222  CTCAGGAACCTCCGGGCCTGGATGAAGGACGAGCGTGTGCCCAAGAACCTGGCCACGCAGCTGGACTCCGCCTT  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTCAGGAACCTCCGGGCCTGGATGAAGGACGAGCGTGTGCCCAAGAACCTGGCCACGCAGCTGGACTCCGCCTT  296

Query  296  CATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCATTGCGCCCTGGAACTATCCGCTGAACCTGACGCTGGTGC  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCATTGCGCCCTGGAACTATCCGCTGAACCTGACGCTGGTGC  370

Query  370  CCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGGTGCTGAAGCCATCGGAGATTAGCAAGAACGTCGAGAAG  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGGTGCTGAAGCCATCGGAGATTAGCAAGAACGTCGAGAAG  444

Query  444  ATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAGAGCT---------------GCTT---------------  487
            ||||||||||||||||||||||||||||||||||||||||               ||.|               
Sbjct  445  ATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAGAGCTCCCCAAACCTGGGCCGCATCATCAACCAGAAACA  518

Query  488  --------TGCTGTGG----TGCTGGGC--GGGCC------CCA--GGAGACGGGGC---AGC--TGCTAGAGC  534
                    .||||.||    ||||||||  .||||      |||  |     |||||   |||  ||  |||||
Sbjct  519  GTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGTGTGGCCATTG-----GGGGCCAGAGCGATG--AGAGC  585

Query  535  ACAGGTTCGACTACATCTTCTTCACAGGGAGCCCTCGTG--TGGGCA--AGAT------TGTTATG--------  590
                |.||| |||||||..|..|||.|.|    ||.|||  ||.|||  ||||      |||.|||        
Sbjct  586  ----GATCG-CTACATCGCCCCCACGGTG----CTGGTGGATGTGCAGGAGATGGAGCCTGTGATGCAGGAGGA  650

Query  591  --ACTGCTGCCGCCAAGC--ACCCCTC---AA--AGCAGCGCCT-------GCC-------TCCTC--CCTCCT  639
              .||.|.|  |||.|.|  .|||.||   ||  .||||.||.|       |||       ||.||  ||..|.
Sbjct  651  GATCTTCGG--GCCCATCCTGCCCATCGTGAACGTGCAGAGCTTGGACGAGGCCATCGAGTTCATCAACCGGCG  722

Query  640  GG-GTCTTCCCTCTCCCTGCCTCAGCCTCCTCCCTCAGCCGC---------------------TCCCA-ACCA-  689
            || |....||||..|||||  |..||||.||||..||||.||                     .|||| |||| 
Sbjct  723  GGAGAAGCCCCTGGCCCTG--TACGCCTTCTCCAACAGCAGCCAGGTGGTCAAGCGGGTGCTGACCCAGACCAG  794

Query  690  --------------------------------------------------------------------------  689
                                                                                      
Sbjct  795  CAGCGGGGGCTTCTGTGGGAACGACGGCTTCATGCACATGACCCTGGCCAGCCTGCCTTTTGGAGGAGTGGGTG  868

Query  690  --------------------------------------------------------------------------  689
                                                                                      
Sbjct  869  CCAGTGGGATGGGCCGGTACCATGGCAAGTTCTCCTTCGACACCTTCTCCCACCATCGCGCCTGCCTCCTGCGC  942

Query  690  --------------------------------------------------------------------------  689
                                                                                      
Sbjct  943  AGCCCGGGGATGGAGAAGCTCAACGCCCTCCGCTACCCGCCGCAATCGCCGCGCCGCCTGAGGATGCTGCTGGT  1016

Query  690  -------------------------------------  689
                                                 
Sbjct 1017  GGCCATGGAGGCCCAAGGCTGCAGCTGCACACTGCTC  1053