Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14174
- Subject:
- XR_926267.2
- Aligned Length:
- 3725
- Identities:
- 284
- Gaps:
- 3441
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAACGTGGCGGGACGTATGTGTCATGGCGCTCTCCATCTAAAGTCTGTGCAGCTTCCGGAGAGTGGCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGATTTTCTCACTTTGGACTGGTTTTTACTTCCCGACTTCTGGACTCATCTTTCAAGAGGACTTTAGACTAAT 148
Query 1 -------------------ATGCCTTCTGCAT----TGATACACTACTGGATGACATCGAAGATATCGTGTCTC 51
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCAGATAATTAAGAGAATATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTC 222
Query 52 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAAGATTCAAAACCACAAGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACC 296
Query 126 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAAAATATTTGCAAGAGGAAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGAT 370
Query 200 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACGAACATGGGGTTGTTCTCATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATA 444
Query 274 AAATTACAGGTGAA------------------------------------------------------------ 287
|||||||| |||
Sbjct 445 AAATTACA---GAAAATGCATCCGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAA 515
Query 288 -------------------------------------------------------------------------- 287
Sbjct 516 GACCACTTTAGAAACTCAATTAAAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCA 589
Query 288 -------------------------------------------------------------------------- 287
Sbjct 590 AGCCCAGCCTCGCCAGGACTACCTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAG 663
Query 288 -------------------------------------------------------------------------- 287
Sbjct 664 TTGTGGAGGAGACAATTAAAGGTCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGG 737
Query 288 -------------------------------------------------------------------------- 287
Sbjct 738 GGAGCACGATTGGATTTGCCGAAGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCT 811
Query 288 -------------------------------------------------------------------------- 287
Sbjct 812 CAATGCTTGTACCTACTGCAAAACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAG 885
Query 288 -------------------------------------------------------------------------- 287
Sbjct 886 ATAGAGCCAAACAATCTTTTCAAGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGC 959
Query 288 -------------------------------------------------------------------------- 287
Sbjct 960 AGAGATATTGGCACCAATCTCCCCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAG 1033
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1034 GCTTGGCATGACAAATCCGCCCTATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAG 1107
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1108 TCTACGCTTTTCTGCACATACCAGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGT 1181
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1182 GTGGCTGACTTCAAAAGAGTAGTGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTAT 1255
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1256 CTGTGGTTTTCCTGGAGAAACAGATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAA 1329
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1330 GCCTGTTTATTAACCAATTTTACCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTG 1403
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1404 ATTGGTGAAAGACAACAAGTGTTAGTAACAGAAGAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATT 1477
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1478 CTATGAGCAGATAAGAGGTGAAAATGTTTGCTATGGATCATGGCTGGAATTAGAGCTTGAGAAGATGCTGAAGG 1551
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1552 CCAAGGTGGACAAGTCGGATGAGGGATGGGCAGAGGAAGCAGGCTGCCTGTGTCAGAAGGCAGGAAAGCAGGAG 1625
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1626 CTGAAGAGGCCCCCAGCATTGACATTCCCCAGGGAATCATCTCAGACTGGGCAGTGCGTCCCCAGGAAACAGGG 1699
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1700 GAGCTTTTCAAAGCCCAGACTAAACGTGCTCTGTTCAGTACCGGTGGAGACTGCAGTTGAGGAAGGGCTCCCAG 1773
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1774 CACTCCATGTCTGGCCTGCATCGCTTCCCCATTTCCCCATCTCATTAATATACCCCAGAGGGCCATTTTCCTAT 1847
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1848 TCAGGCCAACCTTCTGCTCAGCCCTGGGGAGGAGCTTGATTGCATTTTGGTTGCCTCTTCTCTCTCCTTTCTCT 1921
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1922 TGCCATCTGGGTTTTGCCTCAGCAGGGAACTTTTTTCCCTTCATTTTAAAGGCAGTGGCATGCCTCGTTAGCTG 1995
Query 288 -------------------------------------------------------------------------- 287
Sbjct 1996 CTTCCTCCAATTTAAAGCAGTCGGGCTTTTTCCAATTATTAAAACTGGAGGAGGGGAAAACACTGAGCCCTTCA 2069
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2070 TTCAGATCAAGGCAGCAGATCAAGGAGGGTTATTTTTCCCCAGAATAGTACCAAATCTCCCAGGGTTAGTTTGG 2143
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2144 TCTAGAGATTTTCTTATTTTATAAAAACTGATTTAAATGGGCTTTTTATATCCTAACACTAAAGCTCTTTTAGT 2217
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2218 TCTTTTTGCCTGCCCTAAGTAATTCACCACCCAGGTGACCTTTTTCTTCTACTTTGATGAAGCAGTGTACTCAG 2291
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2292 TGGTCATAAAAATCAAACTCAGACCAAGATTCAATTTTGCCTTTCAGAGAGATTGGCTGTGGAACTCCTGGCTC 2365
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2366 TCATCTGACTTTTCTGTCTCTATAACTAAGCATATCAAAGATTTTCTAGGAATTATTTTTCTAAATAAGATGAG 2439
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2440 TTCCAGAGATGAAGATTGTATCTAGATATCCAAGTATTACTGGATTAGAACTGGTCTATTTATTTTGGATTCTA 2513
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2514 ACTTGAAAAGACTGGCAAGTCGCTGCAGTGCTAAAATAGAAGTGTAAGGGAGACATCACACACACAAGCTACCT 2587
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2588 GTGGGTCCCAAAGGAAGGGAAACGTTTGCTTGAAGTAAACAAGTACTTTTATCAGGAATCTCTAGTGGAAAGAG 2661
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2662 ACCACCTGACAGTTTCCTGTGAACAAGCCAAAGTACCCTTCAGAGGACTGGTTCTAGATGGAGGTAGATTCCCA 2735
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2736 GGACTGACAAACACATGCCTTTTCTAACAGAGCAAGGGAAATGAACGGCAGCTGTTAGTTTCAGGAGTCATTTA 2809
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2810 GCTCCAAACAGCAGTGTACAGTGTTATTGGAAGGTTCTTTTAAATGTACCTCCTTCTCCCTCAAAACACAGCAC 2883
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2884 ACACATGCACGGACACAAACACGCAGGCCTGTTTGAAGTGTCTTTTCAAACCATTACTCTGACAGCTCACTTGG 2957
Query 288 -------------------------------------------------------------------------- 287
Sbjct 2958 AAAGTATTAAAAGTATAAGGCTTTCATCAGTATTGTCTCGGTTTTCCTCATTGCATGGAATAGCCAAAAGCAAG 3031
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3032 ATATCAAAGGCCTGTCCAGAAGTGGCTGGCTGATTGCTGGGGGATTTCCCAGGTCTGCCTTCCACGTGCCTCAG 3105
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3106 GACATCAGGCACATCCTGCACTGGAAAAGCACTGCCCAGGGGCCCAGGAGCCCCTCCCAGGAGTGCCTTTCCTT 3179
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3180 CCTGCAGGCTCTGCAGACCCTTGAGCAGCTAGAAGATAGAGTCCACTTTGTAGGGGATCCCAGAACAGAAAAAT 3253
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3254 GACATTGAGGGACAATGAGGAAACCTGGATAATTAGGTTTTAGTGCCAAAGAACCCTGCGTTCATGGGGAAGAT 3327
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3328 GGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTGATGCCAAAGTGTACA 3401
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3402 CGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTCAGAAATGGGCTTGGG 3475
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3476 AACCAGCTGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGCGAGTTCCAGAATGGTGCTGCC 3549
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3550 CATGCCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCTCTGCTGGGTCTTCTTTTTGCTT 3623
Query 288 -------------------------------------------------------------------------- 287
Sbjct 3624 TTTTTGTCAAGGTCTATAATTAGAATACAACTAATGGAAACATCTATAAAGAAGAATACATTTCTAATTAAAAT 3697
Query 288 ------------------------- 287
Sbjct 3698 CTTCAATGAACAGGAAAGCGACATC 3722
