Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14721
- Subject:
- XM_017315420.1
- Aligned Length:
- 2476
- Identities:
- 1232
- Gaps:
- 1058
Alignment
Query 1 ATGTCGTCCTGGATAAGGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTCTGCTGGCTGGTTGTGGGCTT 74
||||||.|||||.|.|.||||||||||||||||||||||||||||||||||||.|||..||||||..|||||||
Sbjct 1 ATGTCGCCCTGGCTGAAGTGGCATGGACCCGCCATGGCGCGGCTCTGGGGCTTATGCCTGCTGGTCTTGGGCTT 74
Query 75 CTGGAGGGCCGCTTTCGCCTGTCCCACGTCCTGCAAATGCAGTGCCTCTCGGATCTGGTGCAGCGACCCTTCTC 148
||||||||||.||.|||||||.||.||||||||||||||||||.||.||.||||.|||||.|..||.|||||||
Sbjct 75 CTGGAGGGCCTCTCTCGCCTGCCCGACGTCCTGCAAATGCAGTTCCGCTAGGATTTGGTGTACTGAGCCTTCTC 148
Query 149 CTGGCATCGTGGCATTTCCGAGATTGGAGCCTAACAGTGTAGATCCTGAGAACATCACCGAAATTTTCATCGCA 222
|.||||||||||||||.|||||.|||||.||||||||.||.||.||.|||||||||||.||||||.||||.|||
Sbjct 149 CAGGCATCGTGGCATTCCCGAGGTTGGAACCTAACAGCGTTGACCCGGAGAACATCACGGAAATTCTCATTGCA 222
Query 223 AACCAGAAAAGGTTAGAAATCATCAACGAAGATGATGTTGAAGCTTATGTGGGACTGAGAAATCTGACAATTGT 296
||||||||||||.|||||||||||||.||||||||.|||||||||||.|||||.||||||||.||.||||||||
Sbjct 223 AACCAGAAAAGGCTAGAAATCATCAATGAAGATGACGTTGAAGCTTACGTGGGGCTGAGAAACCTTACAATTGT 296
Query 297 GGATTCTGGATTAAAATTTGTGGCTCATAAAGCATTTCTGAAAAACAGCAACCTGCAGCACATCAATTTTACCC 370
||||||.||.|||||.|||||||||.|.|||||.||||||||||||||||||||||.||||||.|||||.||.|
Sbjct 297 GGATTCCGGCTTAAAGTTTGTGGCTTACAAAGCGTTTCTGAAAAACAGCAACCTGCGGCACATAAATTTCACAC 370
Query 371 GAAACAAACTGACGAGTTTGTCTAGGAAACATTTCCGTCACCTTGACTTGTCTGAACTGATCCTGGTGGGCAAT 444
|||||||.||||||||||||||.||||.|||||||||.|||||||||||||||||.|||||||||..|||.|||
Sbjct 371 GAAACAAGCTGACGAGTTTGTCCAGGAGACATTTCCGCCACCTTGACTTGTCTGACCTGATCCTGACGGGTAAT 444
Query 445 CCATTTACATGCTCCTGTGACATTATGTGGATCAAGACTCTCCAAGAGGCTAAATCCAGTCCAGACACTCAGGA 518
||.||.||.||||||||.|||||.||||||.|||||||||||||.|||.||||||||||.||.|||||||||||
Sbjct 445 CCGTTCACGTGCTCCTGCGACATCATGTGGCTCAAGACTCTCCAGGAGACTAAATCCAGCCCCGACACTCAGGA 518
Query 519 TTTGTACTGCCTGAATGAAAGCAGCAAGAATATTCCCCTGGCAAACCTGCAGATACCCAATTGTGGTTTGCCAT 592
||||||||||||.|||||.|||||||||||.||.||||||||.||||||||||||||||||||||||.||||||
Sbjct 519 TTTGTACTGCCTCAATGAGAGCAGCAAGAACATGCCCCTGGCGAACCTGCAGATACCCAATTGTGGTCTGCCAT 592
Query 593 CTGCAAATCTGGCCGCACCTAACCTCACTGTGGAGGAAGGAAAGTCTATCACATTATCCTGTAGTGTGGCAGGT 666
|||||..||||||.||.|||||||||||.||||||||||||||||||.|.||..|.|||||.|||||||..|||
Sbjct 593 CTGCACGTCTGGCTGCTCCTAACCTCACCGTGGAGGAAGGAAAGTCTGTGACCCTTTCCTGCAGTGTGGGGGGT 666
Query 667 GATCCGGTTCCTAATATGTATTGGGATGTTGGTAACCTGGTTTCCAAACATATGAATGAAACAAGCCACACACA 740
||.||..|.||.|...||||.|||||.|||||.||..||||||||||.||.|||||||||||||||||||||||
Sbjct 667 GACCCACTCCCCACCTTGTACTGGGACGTTGGGAATTTGGTTTCCAAGCACATGAATGAAACAAGCCACACACA 740
Query 741 GGGCTCCTTAAGGATAACTAACATTTCATCCGATGACAGTGGGAAGCAGATCTCTTGTGTGGCGGAAAATCTTG 814
||||||||||||||||||.|||||||||||.|||||||||||.|||||.||||||||||||||.|||||.||||
Sbjct 741 GGGCTCCTTAAGGATAACGAACATTTCATCTGATGACAGTGGAAAGCAAATCTCTTGTGTGGCAGAAAACCTTG 814
Query 815 TAGGAGAAGATCAAGATTCTGTCAACCTCACTGTGCATTTTGCACCAACTATCACATTTCTCGAATCTCCAACC 888
||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||.|||||||||
Sbjct 815 TAGGAGAAGATCAAGATTCTGTGAACCTCACTGTGCATTTTGCGCCAACTATCACGTTTCTCGAGTCTCCAACC 888
Query 889 TCAGACCACCACTGGTGCATTCCATTCACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGG 962
|||||.||||||||||||||||||||||||||||.||||||||||||.||.|||||||||||||||||.||.||
Sbjct 889 TCAGATCACCACTGGTGCATTCCATTCACTGTGAGAGGCAACCCCAAGCCTGCGCTTCAGTGGTTCTACAATGG 962
Query 963 GGCAATATTGAATGAGTCCAAATACATCTGTACTAAAATACATGTTACCAATCACACGGAGTACCACGGCTGCC 1036
|||.|||.|||||||||||||.||||||||||||||.||.||.||.||||||||||||||||||||.|||||||
Sbjct 963 GGCCATACTGAATGAGTCCAAGTACATCTGTACTAAGATCCACGTCACCAATCACACGGAGTACCATGGCTGCC 1036
Query 1037 TCCAGCTGGATAATCCCACTCACATGAACAATGGGGACTACACTCTAATAGCCAAGAATGAGTATGGGAAGGAT 1110
|||||||||||||.||||||||.|||||.||.||.||||||||.||.||.||||||||.|||||||||||||||
Sbjct 1037 TCCAGCTGGATAACCCCACTCATATGAATAACGGAGACTACACCCTGATGGCCAAGAACGAGTATGGGAAGGAT 1110
Query 1111 GAGAAACAGATTTCTGCTCACTTCATGGGCTGGCCTGGAATTGACGATGGTGCAAACCCAAATTATCCTGATGT 1184
||||.||||||.||.|||||||||||||||.||||||||.|.|||.|.|...|||||||||||||.|||||.||
Sbjct 1111 GAGAGACAGATCTCCGCTCACTTCATGGGCCGGCCTGGAGTCGACTACGAGACAAACCCAAATTACCCTGAAGT 1184
Query 1185 AATTTATGAAGATTATGGA--ACTGCAGCGAA-TGACATCGGGGACACCACGAACAGAAGTAATGAAATCCCTT 1255
..|.|||||||| .|||| || ||.|| ||||||.|||||.||.|||||||.|||||||||||||||.|
Sbjct 1185 CCTCTATGAAGA--CTGGACCAC----GCCAACTGACATTGGGGATACTACGAACAAAAGTAATGAAATCCCCT 1252
Query 1256 CCACAGACGTCACTGATAAAACCGGTCGGGAACATCTCTCGGTCTATGCTGTGGTGGTGATTGCGTCTGTGGTG 1329
||||.||.||..||||..|||.|..||||||.|||||||||||||||||.||||||||||||||.|||||||||
Sbjct 1253 CCACGGATGTTGCTGACCAAAGCAATCGGGAGCATCTCTCGGTCTATGCCGTGGTGGTGATTGCATCTGTGGTG 1326
Query 1330 GGATTTTGCCTTTTGGTAATGCTGTTTCTGCTTAAGTTGGCAAGACACTCCAAGTTTGGCATGAAAGGCCCAGC 1403
|||||.|||||..||||.|||.||.|.|||||.||||||||.|||||.||||||||||||||||||||
Sbjct 1327 GGATTCTGCCTGCTGGTGATGTTGCTCCTGCTCAAGTTGGCGAGACATTCCAAGTTTGGCATGAAAGG------ 1394
Query 1404 CTCCGTT-------ATCAGCAATGATGATGACTCTGCCAGCCCACTCCATCACATCTCCAATGGGAGTAACACT 1470
.|..||| ||.|| |.|||||| ..|||||
Sbjct 1395 TTTTGTTTTGTTTCATAAG-------------------ATCCCACT------------GGATGGG--------- 1428
Query 1471 CCATCTTCTTCGGAAGGTGGCCCAGATGCTGTCATTATTGGAATGACCAAGATCCCTGTCATTGAAAATCCCCA 1544
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1545 GTACTTTGGCATCACCAACAGTCAGCTCAAGCCAGACACATTTGTTCAGCACATCAAGCGACATAACATTGTTC 1618
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1619 TGAAAAGGGAGCTAGGCGAAGGAGCCTTTGGAAAAGTGTTCCTAGCTGAATGCTATAACCTCTGTCCTGAGCAG 1692
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1693 GACAAGATCTTGGTGGCAGTGAAGACCCTGAAGGATGCCAGTGACAATGCACGCAAGGACTTCCACCGTGAGGC 1766
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1767 CGAGCTCCTGACCAACCTCCAGCATGAGCACATCGTCAAGTTCTATGGCGTCTGCGTGGAGGGCGACCCCCTCA 1840
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1841 TCATGGTCTTTGAGTACATGAAGCATGGGGACCTCAACAAGTTCCTCAGGGCACACGGCCCTGATGCCGTGCTG 1914
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1915 ATGGCTGAGGGCAACCCGCCCACGGAACTGACGCAGTCGCAGATGCTGCATATAGCCCAGCAGATCGCCGCGGG 1988
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 1989 CATGGTCTACCTGGCGTCCCAGCACTTCGTGCACCGCGATTTGGCCACCAGGAACTGCCTGGTCGGGGAGAACT 2062
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2063 TGCTGGTGAAAATCGGGGACTTTGGGATGTCCCGGGACGTGTACAGCACTGACTACTACAGGGTCGGTGGCCAC 2136
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2137 ACAATGCTGCCCATTCGCTGGATGCCTCCAGAGAGCATCATGTACAGGAAATTCACGACGGAAAGCGACGTCTG 2210
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2211 GAGCCTGGGGGTCGTGTTGTGGGAGATTTTCACCTATGGCAAACAGCCCTGGTACCAGCTGTCAAACAATGAGG 2284
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2285 TGATAGAGTGTATCACTCAGGGCCGAGTCCTGCAGCGACCCCGCACGTGCCCCCAGGAGGTGTATGAGCTGATG 2358
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2359 CTGGGGTGCTGGCAGCGAGAGCCCCACATGAGGAAGAACATCAAGGGCATCCATACCCTCCTTCAGAACTTGGC 2432
Sbjct 1429 -------------------------------------------------------------------------- 1428
Query 2433 CAAGGCATCTCCGGTCTACCTGGACATTCTAGGC 2466
Sbjct 1429 ---------------------------------- 1428
