Nucleotide Global Alignment

Description

• Query: ccsbBroad304_15089
• Subject: XM_006538467.3
• Aligned Length: 1764
• Identities: 1337
• Gaps: 177

Alignment

Query    1  ATGTCGTGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGACGCGGGGCCGCCGCCGCCTTTGCCGCCCGC  74
            ||||||||||||||||||||   |||||||||||||||.||||.|.|.|||||.||||.|||.|||||||||||
Sbjct    1  ATGTCGTGGCTCTTCGGCAT---CAAGGGCCCCAAGGGCGAAGGCACAGGGCCTCCGCTGCCCTTGCCGCCCGC  71

Query   75  GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGCTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT  148
            .||.||||||||.|||||||||||.||||||||...||||||||||||..||||||||||||||||||||||||
Sbjct   72  TCAACCCGGGGCGGAGGGCGGCGGTGACCGCGGGGCGGGAGACCGGCCATCGCCCAAGGACAAATGGAGCAACT  145

Query  149  TCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAAGGACGCC  222
            |||||||.||.||||||||.||.||.|||||.|||||.||||||.|||||||||||||..||||||||||.||.
Sbjct  146  TCGACCCGACGGGCCTGGAACGTGCGGCCAAAGCGGCTCGCGAGTTGGAGCACTCGCGCCATGCCAAGGAGGCA  219

Query  223  CTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGTCCAAGCTCAAAGAGTATGAGGCCGC  296
            ||||.|||.|||||||||||||||||||||||||||.||||.||.||||||||||||||.|||||.||.||.||
Sbjct  220  CTGAGTCTCGCACAGATGCAGGAGCAGACGCTGCAGCTGGAACAGCAGTCCAAGCTCAAGGAGTACGAAGCTGC  293

Query  297  CGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCC  370
            |||.||||||||.||||||||.||||||||.|.|||.||.|||||.||.|||||.|||||||..||.|||||.|
Sbjct  294  CGTAGAGCAGCTGAAGAGCGAACAGATCCGTGTGCAAGCCGAGGAAAGAAGGAAAACCCTGACTGAAGAGACAC  367

Query  371  GGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAG  444
            |.|||||||||||.|||||||||||.||.||.|||||.||.||.||||||||.||||||||.|||||.||.|||
Sbjct  368  GACAGCACCAGGCTAGGGCCCAGTACCAGGATAAGCTCGCTCGACAGCGCTATGAGGACCAGCTGAAACAACAG  441

Query  445  CAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCAC  518
            ||||||||.|||||.|||||||||.||||.||.||||||||.||||||||||||||.|||||.|||||||||||
Sbjct  442  CAACTTCTGAATGAAGAGAATTTAAGGAAACAAGAGGAGTCTGTGCAGAAGCAGGAGGCCATACGGCGAGCCAC  515

Query  519  CGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGGGCGCGCGCCA  592
            .||||||||.||||||||||||.||||.||.||.||||||.||||.|||||.||.||.|||||.||.||.||||
Sbjct  516  TGTGGAGCGCGAGATGGAGCTGAGGCATAAAAACGAGATGTTGCGGGTGGAAGCTGAAGCCCGAGCACGGGCCA  589

Query  593  AGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCGTCAGACCGTC  666
            ||||.||.||.|||||||||||.||||||||.||.|||||.||.||.|||||.||.||||||||.||||||.||
Sbjct  590  AGGCTGATCGAGAGAATGCAGATATCATCCGGGAACAGATTCGACTCAAGGCTGCTGAGCACCGCCAGACCATC  663

Query  667  TTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACTGGGACAAAGT  740
            ||||||||.||||||||.||||||||||||.||||.||||||||||||||.|||||||||||||||||||||||
Sbjct  664  TTGGAGTCTATCAGGACAGCTGGCACCTTGCTTGGTGAAGGATTCCGTGCATTTGTGACAGACTGGGACAAAGT  737

Query  741  GACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCACGCTTGTCGCCG  814
            ||||||.||||||||||||.||||.||..|.||||||||.|||||.||.||.||||||||.||...|||.||.|
Sbjct  738  GACAGCTACGGTGGCTGGGTTGACACTATTAGCTGTTGGAGTCTATTCTGCAAAGAATGCTACTTCTGTTGCTG  811

Query  815  GCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTTGAGGCG  888
            |.||.|..||.|||||.||..||||.|||||||||.|.|||||.|||||.|||||.|||.|.|||||.|||||.
Sbjct  812  GTCGGTATATTGAGGCCCGATTGGGAAAGCCGTCCTTGGTGAGAGAGACCTCCCGAATCTCAGTGCTAGAGGCA  885

Query  889  CTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGTGTTGTGCTCAG  962
            .||.||||.|||||||||||||||.||||.||..||||..||||||||||.||..|||||||.||..|.|||||
Sbjct  886  TTGAGGCATCCCATCCAGGTCAGCAGGCGACTGGTCAGCAGACCCCAGGATGCATTGGAGGGCGTCATCCTCAG  959

Query  963  TCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCGCAGCCTGTACA  1036
            |||.||||||||.||||||||.||.||.||.|||||.||||||||.||.||||||||||||...||||||||.|
Sbjct  960  TCCTAGCCTGGAGGCACGGGTCCGAGATATTGCCATCGCAACAAGAAATACCAAGAAGAACAAAAGCCTGTATA  1033

Query 1037  GGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGC  1110
            |||||.|.||||||||.|||||.||.||.||.||.|||||.||.||||||||||||||.||.|||||.||||||
Sbjct 1034  GGAACGTTCTGATGTATGGGCCCCCGGGGACTGGCAAGACACTATTTGCCAAGAAACTTGCACTGCATTCAGGC  1107

Query 1111  ATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCT  1184
            ||||||||||||||||||||||||||||||||||||||.|||||||||||.||.|||||.||||||||||||.|
Sbjct 1108  ATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCAATGGGGCGGGAGGGTGTGACTGCCATGCACAAGGT  1181

Query 1185  CTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTTCCTTCGGAAGC  1258
            |||.||||||||.|..||||||||.||.||||||||||||||||||||||||||.|||||||||||..||||.|
Sbjct 1182  CTTCGACTGGGCAAGCACCAGCCGACGAGGCCTCCTGCTCTTTGTGGATGAAGCAGACGCCTTCCTCAGGAAAC  1255

Query 1259  GAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGGGCCAGCACAGC  1332
            ||||.||.||.||||||||.||.|||||||||||.||.|||||.||||||||..||.|.||.||.||||||||.
Sbjct 1256  GAGCGACTGAAAAGATAAGTGAAGACCTCAGGGCTACTCTGAATGCCTTCCTACACAGGACAGGACAGCACAGT  1329

Query 1333  AACAAGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAATGACCGCATCAATGA  1406
            |..|||||||||||||||||||||||.|||||.||.||||||||.||.|||||.||||||||||||||..|.||
Sbjct 1330  AGTAAGTTCATGCTGGTCCTGGCCAGTAACCAGCCTGAGCAGTTTGATTGGGCTATCAATGACCGCATTGACGA  1403

Query 1407  GATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTTC  1480
            |||||||..|||.|.|||||||..||.||||||.||.|||||||||||||||||||||||||||||||||||.|
Sbjct 1404  GATGGTCTGCTTTGCCCTGCCACAGCGGGAGGAGCGAGAGCGCCTGGTGAGAATGTATTTTGACAAGTATGTCC  1477

Query 1481  TTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTC  1554
            ||||||||||||||||||||||||||                        |..||.|||||             
Sbjct 1478  TTAAGCCGGCCACAGAAGGAAAGCAG------------------------TCAGGAAGGAA-------------  1514

Query 1555  GCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCGTATGC  1628
                ||||||                   |||.||                  ||||||       |.||.|.|
Sbjct 1515  ----GGCTGA-------------------GGATAT------------------CTGGCA-------GAGTTTAC  1540

Query 1629  CTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACA------CCCGCGTGCAAGATGCTGTCCAGCAGCACC  1696
            |||          .||| .||...|||     ||.|||      |||.||..|.| |||.||    |.||||.|
Sbjct 1541  CTC----------ATCC-AACTTCGGC-----TGTACAAAAAAGCCCACGCACTA-ATGGTG----GAAGCATC  1593

Query 1697  AGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC  1758
                                                                          
Sbjct 1594  --------------------------------------------------------------  1593