Nucleotide Global Alignment

Description

• Query: ccsbBroad304_16069
• Subject: XM_017007518.1
• Aligned Length: 1342
• Identities: 1115
• Gaps: 203

Alignment

Query    1  -------------------------------------------ATGG----------GGGAGG--CGCCCAGCC  19
                                                       .|||          ||.|||  ||||..|||
Sbjct    1  ATGCGCTTCAGCAGCGCAACTAATTGCTGTTGGCTCAGGAAATGTGGACAATACGCAGGAAGGGACGCCGTGCC  74

Query   20  ---CCGCGCCCGCGCTCTGGGACTGGGACTACCTGGACCGCTGCTTCGCCCGCAACCGCGTCTGCATCTCCTTC  90
               |.|||.|||   .|.||||||.||.|..||..||.|.|.||  ||||||| .|||            ||.|
Sbjct   75  TTACAGCGACCG---GCAGGGACTCGGCCGTCCGCGAGCCCAGC--CGCCCGC-CCCG------------CTCC  130

Query   91  GGCCTGTGGATCTGCGCCTCCTCCTGCTGGATCGCCGCCCACGCGCTGCTTCTCTATCTGAGATGTGCACAGAA  164
            ||||  .|||              ||.||||               .|||||||||||||||||||||||||||
Sbjct  131  GGCC--AGGA--------------TGTTGGA---------------GGCTTCTCTATCTGAGATGTGCACAGAA  173

Query  165  ACCCAGACAGGACCAGTCGGCACTGTGTGCTGCATGCTGCCTCCTGACCAGTCTGTGTGACACCGTCGGGGCTC  238
            |||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  174  ACCCAGACAGGACCAGTCGGCACTGTGTGCTGCGTGCTGCCTCCTGACCAGTCTGTGTGACACCGTCGGGGCTC  247

Query  239  TTCTGGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGCCTACCTAGCAGCTATTGACTTAGTGAACTTTATG  312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  248  TTCTGGCCAGACAGCTCACAATCCAGGTTTTCACTGGTGCCTACCTAGCAGCTATTGACTTAGTGAACTTTATG  321

Query  313  TTCATTCTCTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCGGGAAGCCCGAGAGAGGAAGAGGAG  386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  322  TTCATTCTCTTCCCAGTCTGTGGATCCAAATTCAAGTCTAATTCAGATCGGGAAGCCCGAGAGAGGAAGAGGAG  395

Query  387  GCGGCAGCTCAGGGCCAGTGTGTTTGCCCTGGCCCTGCCGCTGAGCCTGGGCCCGTGCTGGGCTCTGTGGGTTG  460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  396  GCGGCAGCTCAGGGCCAGTGTGTTTGCCCTGGCCCTGCCGCTGAGCCTGGGCCCGTGCTGGGCTCTGTGGGTTG  469

Query  461  CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGAAAATACT  534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  470  CTGTCCCGAAGGCTTCAGCCACCATCCGGGGGCCACAGCGGAGGCTGCTAGCGAGCCTGCTGCAGGAAAATACT  543

Query  535  GAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGCTCCTGGGCTTCTCGGATCCCCCCTCTCTCCAG  608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  544  GAGATCCTCGGCTACCTGCTGGGTAGCGTTGCTGCCTTTGGCTCCTGGGCTTCTCGGATCCCCCCTCTCTCCAG  617

Query  609  AATTTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCTCCTCT  682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  618  AATTTGCCGGGGGAAGACATTTCCCTCCATCCACCTGTGGACCCGGCTCCTGTCGGCCCTGGCTGGCCTCCTCT  691

Query  683  ATGCCTCGGCCATTGTGGCCCACGACCGGCACCCTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGACCTCC  756
            |||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  692  ATGCCTCGGCCATTGTGGCCCACGACCAGCACCCTGAGTACCTGCTGCGGGCCACACCCTGGTTCCTGACCTCC  765

Query  757  CTCGGCCGTGCGGCACTGGACCTCGCTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT  830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  766  CTCGGCCGTGCGGCACTGGACCTCGCTATTATTTTCCTTTCGTGTGTGATGAAGAGCAAGATGAGACAGGCCTT  839

Query  831  AGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAAA  904
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  840  AGGATTTGCCAAGGAAGCCAGAGAGAGCCCTGACACCCAAGCCCTTTTGACCTGTGCAGAGAAAGAGGAAGAAA  913

Query  905  ACCAGGAGAATTTGGATTGGGTGCCTCTCACCACACTGTCACACTGCAAGTCACTGAGGACAATGACAGCAATC  978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  914  ACCAGGAGAATTTGGATTGGGTGCCTCTCACCACACTGTCACACTGCAAGTCACTGAGGACAATGACAGCAATC  987

Query  979  AGTCGCTACATGGAGCTGACCATCGAGCCTGTGCA----GCAGGCTGCAGTGCCACCAGGCTGCCAGGTGACGG  1048
            |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||
Sbjct  988  AGTCGCTACATGGAGCTGACCATCGAGCCTGTGCAGCAGGCAGGCTGCAGTGCCACCAGGCTGCCAGGTGACGG  1061

Query 1049  GCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCCCCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCGGG  1122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1062  GCAGACGAGCGCCGGAGATGCGTCCCTGCAGGACCCCCCGTCGTACCCTCCCGTTCAGGTCATCCGGGCCCGGG  1135

Query 1123  TGTCTTCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGTGGGACCCTGAAGATG--------  1188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 1136  TGTCTTCCGGCAGCTCCTCTGAGGTCTCCTCCATCAACTCCGACCTGGAGTGGGACCCTGAAGATGTGAACCTC  1209

Query 1189  --------------------------------------------------------------------------  1188
                                                                                      
Sbjct 1210  GAAGGCAGCAAAGAAAATGTGGAGCTACTGGGATCCCAGGTGCACCAGGACTCTGTGAGGACAGCACACCTGAG  1283

Query 1189  ----------  1188
                      
Sbjct 1284  TGATGATGAT  1293