Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16128
- Subject:
- NM_001282734.1
- Aligned Length:
- 2073
- Identities:
- 805
- Gaps:
- 1263
Alignment
Query 1 ATGTGCTTCCGGACAAAGCTCTCAGTATCCTGGGTGCCATTGTTTCTTCTACTCAGCCGTGTTTTTTCTACTGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GACAGACAAACCCTCAGCCCAGGACAGCAGAAGCCGTGGGAGTTCAGGCCAACCGGCAGACCTGCTACAGGTTC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCTCTGCTGGTGACCACCCACCCCACAACCACTCAAGAAGCCTCATCAAAACATTGTTGGAGAAAACTGGGTGC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CCACGGAGGAGAAACGGAATGCAAGGAGATTGCAATCTGTGCTTTGAACCAGATGCACTATTACTAATAGCTGG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGGAAATTTTGAAGATCAGCTTAGAGAAGAAGTGGTCCAGAGAGTTTCTCTTCTCCTTCTCTATTACATTATTC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATCAGGAAGAGATCTGTTCTTCAAAGCTCAACATGAGTAATAAAGAGTATAAATTTTACCTACACAGCCTACTG 444
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 --------------------------------ATGAGTAATAAAGAGTATAAATTTTACCTACACAGCCTACTG 42
Query 445 AGCCTCAGGCAGGATGAAGATTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCAGGCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 43 AGCCTCAGGCAGGATGAAGATTCCTCTTTCCTTTCACAGAATGAGACAGAAGATATCTTGGCTTTCACCAGGCA 116
Query 519 GTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACGCTGCAGAAAAAATCTGGAATAGTGAGCAGTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 GTACTTTGACACTTCTCAAAGCCAGTGTATGGAAACCAAAACGCTGCAGAAAAAATCTGGAATAGTGAGCAGTG 190
Query 593 AAGGTGCTAATGAAAGTACGCTTCCTCAGTTGGCAGCCATGATCATTACTTTGTCCCTCCAGGGTGTTTGTCTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 AAGGTGCTAATGAAAGTACGCTTCCTCAGTTGGCAGCCATGATCATTACTTTGTCCCTCCAGGGTGTTTGTCTG 264
Query 667 GGACAAGGAAACTTGCCTTCACCAGACTACTTTACAGAATATATTTTCAGTTCCTTGAATCGTACGAATACACT 740
||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 265 GGACAAGGAAACTTGCCTTCCCCAGACTACTTTACAGAATATATTTTCAGTTCCTTGAATCGTACGAATACCCT 338
Query 741 CCGCCTATCAGAACTAGACCAACTCCTCAACACTCTCTGGACCAGAAGTACTTGTATCAAAAATGAGAAAATCC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 339 CCGCCTATCAGAACTAGACCAACTCCTCAACACTCTCTGGACCAGAAGTACTTGTATCAAAAATGAGAAAATCC 412
Query 815 ATCAATTTCAAAGGAAACAAAACAACATAATAACCCATGATCAGGACTATTCTAATTTCTCTTCATCCATGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 413 ATCAATTTCAAAGGAAACAAAACAACATAATAACCCATGATCAGGACTATTCTAATTTCTCTTCATCCATGGAA 486
Query 889 AAAGAGTCTGAGGATGGTCCAATTTCCTGGGATCAGACCTGCTTCTCTGCTAGGCAGCGTGTGGAGATATTTCT 962
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||..||||||||||||||
Sbjct 487 AAAGAGTCTGAGGATGGTCCAGTTTCCTGGGATCAGACCTGCTTCTCTGCTAGGCAGCTGGTGGAGATATTTCT 560
Query 963 ACAGAAGGGCCTCTCACTCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATC------------- 1023
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 561 ACAGAAGGGCCTCTCACTCATTTCTAAGGAGGACTTTAAGCAAATGAGTCCAGGGATCATCCAGCAGCTCCTCA 634
Query 1024 -------------------------------------------------------------------------- 1023
Sbjct 635 GCTGCTCCTGCCACTTACCCAAGGACCAACAAGCAAAGCTGCCACCTACCACTCTGGAGAAATACGGCTACAGC 708
Query 1024 -------------------------------------------CAGCGCTGGTCCTTTTCCATAGCTGTGAGGA 1054
|||||||||||||||||||||||||||||||
Sbjct 709 ACGGTGGCTGTCACCCTTCTCACACTGGGCTCCATGCTGGGGACAGCGCTGGTCCTTTTCCATAGCTGTGAGGA 782
Query 1055 GAACTACAGGCTTATCTTACAGCTGTTTGTGGGCTTGGCCGTCGGGACACTGTCTGGGGACGCTCTGCTCCACC 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 GAACTACAGGCTTATCTTACAGCTGTTTGTGGGCTTGGCCGTCGGGACACTGTCTGGGGACGCTCTGCTCCACC 856
Query 1129 TTATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCCCAGAATTTGGGCATTTCCATGAAAGCAAAGGTCAT 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 TTATCCCTCAGGTTCTTGGTTTACATAAGCAGGAAGCCCCAGAATTTGGGCATTTCCATGAAAGCAAAGGTCAT 930
Query 1203 ATTTGGAAAC---------------------------------------------------------------- 1212
||||||||||
Sbjct 931 ATTTGGAAACTGATGGGATTAATTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATTCTTCTTGT 1004
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1005 ATCACCAAATGACAAGCAGGGCCTGTCATTGGTTAATGGGCACGTGGGTCATTCCCACCATCTTGCACTCAACT 1078
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1079 CTGAATTAAGTGACCAGGCAGGCAGAGGCAAATCTGCTTCAACTATCCAGTTGAAAAGCCCAGAAGATTCACAG 1152
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1153 GCAGCTGAAATGCCTATAGGCAGTATGACAGCCTCCAACAGAAAATGTAAAGCCATTAGCTTGTTAGCAATCAT 1226
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1227 GATTCTGGTTGGGGACAGCCTGCATAATTTTGCAGATGGCCTAGCCATAGGAGCAGCCTTCTCATCATCATCCG 1300
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1301 AGTCAGGAGTGACCACTACGATTGCTATCTTGTGTCATGAAATCCCACATGAAATGGGAGACTTTGCCGTGCTC 1374
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1375 TTAAGCTCTGGACTTTCTATGAAGACTGCCATCCTGATGAATTTTATAAGCTCCCTAACTGCCTTCATGGGATT 1448
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1449 ATACATTGGCCTTTCCGTGTCAGCTGATCCATGTGTTCAAGACTGGATCTTCACAGTCACTGCTGGGATGTTCT 1522
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1523 TATATTTATCCTTGGTTGAAATGCTTCCTGAAATGACTCATGTTCAAACACAACGACCCTGGATGATGTTTCTC 1596
Query 1213 -------------------------------------------------------------------------- 1212
Sbjct 1597 CTGCAAAACTTTGGATTGATCCTAGGTTGGCTTTCTCTCCTGCTCTTGGCTATATATGAGCAAAATATTAAAAT 1670
Query 1213 - 1212
Sbjct 1671 A 1671
