Construct: ORF ccsbBroad304_16128

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008943.1_s304c1, BRDN0000412037
Derived from:
ccsbBroadEn_16128
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC39A12 (221074)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_16128
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 221074 SLC39A12 solute carrier family 39 me... NM_152725.3 61.4% 54.1% (many diffs)
2 human 221074 SLC39A12 solute carrier family 39 me... NM_001282733.1 58.2% 51.3% (many diffs)
3 human 221074 SLC39A12 solute carrier family 39 me... NM_001145195.2 58.1% 51.2% (many diffs)
4 human 221074 SLC39A12 solute carrier family 39 me... NM_001282734.1 38.8% 32.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1281
ORF length:
1212
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtgcttccgg acaaagctct cagtatcctg ggtgccattg tttcttctac
121tcagccgtgt tttttctact gagacagaca aaccctcagc ccaggacagc agaagccgtg
181ggagttcagg ccaaccggca gacctgctac aggttctctc tgctggtgac cacccacccc
241acaaccactc aagaagcctc atcaaaacat tgttggagaa aactgggtgc ccacggagga
301gaaacggaat gcaaggagat tgcaatctgt gctttgaacc agatgcacta ttactaatag
361ctggaggaaa ttttgaagat cagcttagag aagaagtggt ccagagagtt tctcttctcc
421ttctctatta cattattcat caggaagaga tctgttcttc aaagctcaac atgagtaata
481aagagtataa attttaccta cacagcctac tgagcctcag gcaggatgaa gattcctctt
541tcctttcaca gaatgagaca gaagatatct tggctttcac caggcagtac tttgacactt
601ctcaaagcca gtgtatggaa accaaaacgc tgcagaaaaa atctggaata gtgagcagtg
661aaggtgctaa tgaaagtacg cttcctcagt tggcagccat gatcattact ttgtccctcc
721agggtgtttg tctgggacaa ggaaacttgc cttcaccaga ctactttaca gaatatattt
781tcagttcctt gaatcgtacg aatacactcc gcctatcaga actagaccaa ctcctcaaca
841ctctctggac cagaagtact tgtatcaaaa atgagaaaat ccatcaattt caaaggaaac
901aaaacaacat aataacccat gatcaggact attctaattt ctcttcatcc atggaaaaag
961agtctgagga tggtccaatt tcctgggatc agacctgctt ctctgctagg cagcgtgtgg
1021agatatttct acagaagggc ctctcactca tttctaagga ggactttaag caaatgagtc
1081cagggatcat ccagcgctgg tccttttcca tagctgtgag gagaactaca ggcttatctt
1141acagctgttt gtgggcttgg ccgtcgggac actgtctggg gacgctctgc tccaccttat
1201ccctcaggtt cttggtttac ataagcagga agccccagaa tttgggcatt tccatgaaag
1261caaaggtcat atttggaaac tnnccaactt tcttgtacaa agtggttggt aagcctatcc
1321ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
1381ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)