Protein Global Alignment

Description

Query:
ccsbBroad304_16128
Subject:
NM_001282734.1
Aligned Length:
700
Identities:
225
Gaps:
439

Alignment

Query   1  MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPADLLQVLSAGDHPPHNHSRSLIKTLLEKTGC  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  PRRRNGMQGDCNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLL  148
                                                                       ||||||||||||||
Sbjct   1  ------------------------------------------------------------MSNKEYKFYLHSLL  14

Query 149  SLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQGVCL  222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  15  SLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQGVCL  88

Query 223  GQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQRKQNNIITHDQDYSNFSSSME  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  89  GQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQRKQNNIITHDQDYSNFSSSME  162

Query 297  KESEDGPISWDQTCFSARQRVEIFLQKGLSLISKEDFKQMSPGIIQ-----------------------RWSFS  347
           |||||||.|||||||||||.||||||||||||||||||||||||||                       ....|
Sbjct 163  KESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFKQMSPGIIQQLLSCSCHLPKDQQAKLPPTTLEKYGYS  236

Query 348  -IAVRRTT---------GLSYSC---------LWAWPSGHCLGTLCSTLSLRFLVYISRKPQNLGISMKAKVIF  402
            .||...|         .|..||         |..   |...|||.....|...      ||.||........|
Sbjct 237  TVAVTLLTLGSMLGTALVLFHSCEENYRLILQLFV---GLAVGTLSGDALLHLI------PQVLGLHKQEAPEF  301

Query 403  GN------------------------------------------------------------------------  404
           |.                                                                        
Sbjct 302  GHFHESKGHIWKLMGLIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSASTI  375

Query 405  --------------------------------------------------------------------------  404
                                                                                     
Sbjct 376  QLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSSSESGVTTTIAILCHEIP  449

Query 405  --------------------------------------------------------------------------  404
                                                                                     
Sbjct 450  HEMGDFAVLLSSGLSMKTAILMNFISSLTAFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLVEMLPEMTHVQ  523

Query 405  ----------------------------------  404
                                             
Sbjct 524  TQRPWMMFLLQNFGLILGWLSLLLLAIYEQNIKI  557