Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00022
Subject:
XM_017005409.1
Aligned Length:
682
Identities:
242
Gaps:
407

Alignment

Query   1  ATGTCTACCGCCCAGTCACTCAAATCC------GTGGACT----------ACGAG-------------------  39
           |||| |.|       ||||.||||.||      ||||.||          |||.|                   
Sbjct   1  ATGT-TGC-------TCACACAAAGCCTGTTTGGTGGTCTCTTCCCACGGACGCGCGAGACAATGAGGAGCTAT  66

Query  40  ------------------GTGTTCGG--------AA-----------GAGTGCAG-------------------  57
                             |.|||.||        ||           |||||.||                   
Sbjct  67  AAATTCATACAATTATCAGAGTTTGGTTTTGGTCAAGTCATAATTGTGAGTGAAGAACCATGGAAGGAGAACAT  140

Query  58  -------------------------------------------GGTGTTTGCTTCAGAATGTATACAGAAGATG  88
                                                      .||||||||||||||||||||||||||||||
Sbjct 141  TTCTTGCTCATCAACTACTTTCATAAAATCAACAATTTGCTTAAGTGTTTGCTTCAGAATGTATACAGAAGATG  214

Query  89  AAGCTAGGAAAATAGGAGTGGTTGGCTGGGTGAAGAATACCAGCAAAGGCACCGTGACAGGCCAAGTGCAGGGG  162
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215  AAGCTAGGAAAATAGGAGTGGTTGGCTGGGTGAAGAATACCAGCAAAGGCACCGTGACAGGCCAAGTGCAGGGG  288

Query 163  CCAGAAGACAAAGTCAATTCCA---TGAAGTCC--TGGCTGAGCAAGGTTGG--------AAGCCCT-------  216
           ||||||||||||||||||||||   ||.|||.|  ||||   .|||..|.||        ||.|.||       
Sbjct 289  CCAGAAGACAAAGTCAATTCCATGTTGGAGTGCAGTGGC---ACAATCTCGGCTCACTACAACCTCTGCCTTCC  359

Query 217  ------AGTTCTCGC--ATTGA-CCGCACAA---------ACTTTTCTAATGAAAA------AACCATC-----  261
                 ||.||||.|  |.|.| ||.|.|||         |||          |.|      |.|||.|     
Sbjct 360  AGGCTCAGATCTCCCCGACTCAGCCTCCCAAGTAGCTGGGACT----------ACAGGTGTGAGCCACCGTGCC  423

Query 262  ------TCTAAG----CTTGAAT----------ACTCTAATTTTAGTATTAGAT--AC----------------  297
                 |.||||    |||.|||          ||..|||...||||||| |||  ||                
Sbjct 424  TGGCCTTATAAGGCTACTTTAATGTTTCATTGGACAGTAAGAATAGTATT-GATGGACCAGATTTTGTTTGTAG  496

Query 298  --------------------------------------------------------------------------  297
                                                                                     
Sbjct 497  ATTACAATCAAACTAATATGTTTGTAGGCAGGCCTGTGAAGAAATTCTCAGAGTTGGGAGTAGCATTTCTATGT  570

Query 298  --------------------------------------------------------------------------  297
                                                                                     
Sbjct 571  TTAGGAATGGACTTCCCACTTGGGCTGGCCTCGAGAAGAATTGTGGCTTCCCTCTCCAATTTGTATGTCCTGTG  644

Query 298  ----------------  297
                           
Sbjct 645  GCATCTCCTCCAGCGT  660