Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00567
Subject:
NR_027621.1
Aligned Length:
2606
Identities:
840
Gaps:
1766

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTGCAGACAACGCTGTTATCACCAGAGCCCGGCACTGAGCTTGGCACATGGCGAGGGCTCAGTAAACTGAATGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAGTGAATGAGACGCCACGCGCCGCTTTGCCATCGGTGCTTTCTGAGTGACGTTAAAACGCTCTGGATGGTGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACTGGGATTATGGATGGGGCTTATTTAGCTCCCTCCGGCTTGCTACTAAGGGGAGGGGTCGTCGGTGGGCCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGCGCCGCTGCAAGCCACCGGGTTCCGAAGTCGGAGGCCGAAACGGCGTGGGCCCCGAAGCGGGGCCGCTTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAGGGAGTGCGCAGGCACCTTGGAAGTTGTTTTCAACCATATCCAGCCTTTGCCGAATACATCCTATCTGCCA  370

Query    1  -----------------------------------------ATGGCGGAGAAGTTTGACTGCCACTACTGCAGG  33
                                                     |||||||||||||||||||||||||||||||||
Sbjct  371  CACATCCAGCGTGAGGTCCCTCCAGCTACAAGGTGGGCACCATGGCGGAGAAGTTTGACTGCCACTACTGCAGG  444

Query   34  GATCCCTTGCAGGGGAAGAAGTATGTGCAAAAGGATGGCCACCACTGCTGCCTGAAATGCTTTGACAAGTTCTG  107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATCCCTTGCAGGGGAAGAAGTATGTGCAAAAGGATGGCCACCACTGCTGCCTGAAATGCTTTGACAAGTTCTG  518

Query  108  TGCCAACACCTGTGTGGAATGCCGCAAGCCCATCGGTGCGGACTCCAAGGAGGTGCACTATAAGAACCGCTTCT  181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGCCAACACCTGTGTGGAATGCCGCAAGCCCATCGGTGCGGACTCCAAGGAGGTGCACTATAAGAACCGCTTCT  592

Query  182  GGCATGACACCTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAATGAGACCTTTGTGGCCAAGGACAAC  255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCATGACACCTGCTTCCGCTGTGCCAAGTGCCTTCACCCCTTGGCCAATGAGACCTTTGTGGCCAAGGACAAC  666

Query  256  AAGATCCTGTGCAACAAGTGCACCACTCGGGAGGACTCCCCCAAGTGCAAGGGGTGCTTCAAGGCCATTGTGGC  329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGATCCTGTGCAACAAGTGCACCACTCGGGAGGACTCCCCCAAGTGCAAGGGGTGCTTCAAGGCCATTGTGGC  740

Query  330  AGGAGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACTGCAAGCAAG  403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGAGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCACCTGTAGTAACTGCAAGCAAG  814

Query  404  TCATCGGGACTGGAAGCTTCTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCC  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TCATCGGGACTGGAAGCTTCTTCCCTAAAGGGGAGGACTTCTACTGCGTGACTTGCCATGAGACCAAGTTTGCC  888

Query  478  AAGCATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGA  551
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAGCATTGCGTGAAGTGCAACAAGGCCATCACATCTGGAGGAATCACTTACCAGGATCAGCCCTGGCATGCCGA  962

Query  552  TTGCTTTGTGTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACT  625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTGCTTTGTGTGTGTTACCTGCTCTAAGAAGCTGGCTGGGCAGCGTTTCACCGCTGTGGAGGACCAGTATTACT  1036

Query  626  GCGTGGATTGCTACAAGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGTTTGGTAAA  699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GCGTGGATTGCTACAAGAACTTTGTGGCCAAGAAGTGTGCTGGATGCAAGAACCCCATCACTGGGTTTGGTAAA  1110

Query  700  GGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAAAATGCTCCGTGAA  773
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGCTCCAGTGTGGTGGCCTATGAAGGACAATCCTGGCACGACTACTGCTTCCACTGCAAAAAATGCTCCGTGAA  1184

Query  774  TCTGGCCAACAAGCGCTTTGTTTTCCACCAGGAGCAAGTGTATTGTCCCGACTGTGCCAAAAAGCTG-------  840
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct 1185  TCTGGCCAACAAGCGCTTTGTTTTCCACCAGGAGCAAGTGTATTGTCCCGACTGTGCCAAAAAGCTGTAAACTG  1258

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1259  ACAGGGGCTCCTGTCCTGTAAAATGGCATTTGAATCTCGTTCTTTGTGTCCTTACTTTCTGCCCTATACCATCA  1332

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1333  ATAGGGGAAGAGTGGTCCTTCCCTTCTTTAAAGTTCTCCTTCCGTCTTTTCTCCCATTTTACAGTATTACTCAA  1406

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1407  ATAAGGGCACACAGTGATCATATTAGCATTTAGCAAAAAGCAACCCTGCAGCAAAGTGAATTTCTGTCCGGCTG  1480

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1481  CAATTTAAAAATGAAAACTTAGGTAGATTGACTCTTCTGCATGTTTCTCATAGAGCAGAAAAGTGCTAATCATT  1554

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1555  TAGCCACTTAGTGATGTAAGCAAGAAGCATAGGAGATAAAACCCCCACTGAGATGCCTCTCATGCCTCAGCTGG  1628

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1629  GACCCACCGTGTAGACACACGACATGCAAGAGTTGCAGCGGCTGCTCCAACTCACTGCTCACCCTCTTCTGTGA  1702

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1703  GCAGGAAAAGAACCCTACTGACATGCATGGTTTAACTTCCTCATCAGAACTCTGCCCTTCCTTCTGTTCTTTTG  1776

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1777  TGCTTTCAAATAACTAACACGAACTTCCAGAAAATTAACATTTGAACTTAGCTGTAATTCTAAACTGACCTTTC  1850

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1851  CCCGTACTAACGTTTGGTTTCCCCGTGTGGCATGTTTTCTGAGCGTTCCTACTTTAAAGCATGGAACATGCAGG  1924

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1925  TGATTTGGGAAGTGTAGAAAGACCTGAGAAAACGAGCCTGTTTCAGAGGAACATCGTCACAACGAATACTTCTG  1998

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 1999  GAAGCTTAACAAAACTAACCCTGCTGTCCTTTTTATTGTTTTTAATTAATATTTTTGTTTTAATTGATAGCAAA  2072

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2073  ATAGTTTATGGGTTTGGAAACTTGCATGAAAATATTTTAGCCCCCTCAGATGTTCCTGCAGTGCTGAAATTCAT  2146

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2147  CCTACGGAAGTAACCGCAAAACTCTAGAGGGGGAGTTGAGCAGGCGCCAGGGCTGTCATCAACATGGATATGAC  2220

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2221  ATTTCACAACAGTGACTAGTTGAATCCCTTGTAACGTAGTAGTTGTCTGCTCTTTGTCCATGTGTTAATGAGGA  2294

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2295  CTGCAAAGTCCCTTCTGTTGTGATTCCTAGGACTTTTCCTCAAGAGGAAATCTGGATTTCCACCTACCGCTTAC  2368

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2369  CTGAAATGCAGGATCACCTACTTACTGTATTCTACATTATTATATGACATAGTATAATGAGACAATATCAAAAG  2442

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2443  TAAACATGTAATGACAATACATACTAACATTCTTGTAGGAGTGGTTAGAGAAGCTGATGCCTCATTTCTACATT  2516

Query  841  --------------------------------------------------------------------------  840
                                                                                      
Sbjct 2517  CTGTCATTAGCTATTATCATCTAACGTTTCAGTGTATCCTTACAGAAATAAAGCAGCATATGAATAACCTGCAA  2590

Query  841  ----------------  840
                            
Sbjct 2591  AAAAAAAAAAAAAAAA  2606

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