Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00924
- Subject:
- NR_110279.3
- Aligned Length:
- 4882
- Identities:
- 318
- Gaps:
- 4527
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTTGCTGTGGAAGCCCCATAGGCAGGAGGCCCCCGGGCAGCACATCCTGTCTGCTTGTGTCTGCTGCAGAGTT 74
Query 1 -----------------------------------------------------ATGTCTCCACACCTCACTGCT 21
||||||||.||||.|||.||.
Sbjct 75 CTGTCCTTGCATTGGTGCGCCTCAGGCCAGGCTGCACTGCTGGGACCTGGGCCATGTCTCCCCACCCCACCGCC 148
Query 22 CTCCTGGGCCTAGTGCTCTGCCTGGCCCAGACCATCCACACGCAGGAGGGGGCCCTTCCCAGACCCTCCATCTC 95
|||||||||||||||||||||||||||||||||||||||||||||||||..|..||.|||||||||||||||||
Sbjct 149 CTCCTGGGCCTAGTGCTCTGCCTGGCCCAGACCATCCACACGCAGGAGGAAGATCTGCCCAGACCCTCCATCTC 222
Query 96 GGCTGAGCCAGGCACTGTGATCTCCCCGGGGAGCCATGTGACTTTCATGTGCCGGGGCCCGGTTGGGGTTCAAA 169
|||||||||||||||.||||||.|||.|||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 223 GGCTGAGCCAGGCACCGTGATCCCCCTGGGGAGCCATGTGACTTTCGTGTGCCGGGGCCCGGTTGGGGTTCAAA 296
Query 170 CATTCCGCCTGGAGAGGGAGGATAGAGCCAAGTACAAAGATAGTTATAATGTGTTTCGACTTGGTCCATCTGAG 243
|||||||||||||||||||...||||.|||..|||||.||||.|.|..||||||.||.|..|.|||||||||||
Sbjct 297 CATTCCGCCTGGAGAGGGACAGTAGATCCACATACAATGATACTGAAGATGTGTCTCAAGCTAGTCCATCTGAG 370
Query 244 TCAGAGGCCAGATTCCACATTGACTCAGTAAGTGAAGGAAATGCCGGGCTTTATCGCTGCCTCTATTATAAGCC 317
||||||||||||||||.||||||||||
Sbjct 371 TCAGAGGCCAGATTCCGCATTGACTCA----------------------------------------------- 397
Query 318 CCCTGGATGGTCTGAGCACAGTGACTTCCTGGAGCTGCTGGTGAAAGAAAGCTCTGGAGGCCCGGACTCCCCGG 391
|||||||||||||||||||||||||||
Sbjct 398 -----------------------------------------------AAAGCTCTGGAGGCCCGGACTCCCCGG 424
Query 392 ACACAGAGCCCGGCTCCTCAGCTGGGACTGTGCCAGGCACTGAAGCCTCCGGA----------TTTG---ATGC 452
||||||||||||||||||||||| |||| |||.||| ||.|||..|||| ..|| ||||
Sbjct 425 ACACAGAGCCCGGCTCCTCAGCT-GGAC----CCACGCA--GAGGCCGTCGGACAACAGTCACAATGAGCATGC 491
Query 453 ACCA---------------------------------------------------------------------- 456
|||.
Sbjct 492 ACCTGCTTCCCAAGGCCTGAAAGCTGAGCATCTGTATATTCTCATCGGGGTCTCAGTGGTCTTCCTCTTCTGTC 565
Query 457 -------------------------------------------------------------------------- 456
Sbjct 566 TCCTCCTCCTGGTCCTCTTCTGCCTCCATCGCCAGAATCAGATAAAGCAGGGGCCCCCCAGAAGCAAGGACGAG 639
Query 457 -------------------------------------------------------------------------- 456
Sbjct 640 GAGCAGAAGCCACAGCAGAGGCCTGACCTGGCTGTTGATGTTCTAGAGAGGACAGCAGACAAGGCCACAGTCAA 713
Query 457 -------------------------------------------------------------------------- 456
Sbjct 714 TGGACTTCCTGAGAAGGACAGAGAGACGGACACCTCGGCCCTGGCTGCAGGGAGTTCCCAGGAGGTGACGTATG 787
Query 457 -------------------------------------------------------------------------- 456
Sbjct 788 CTCAGCTGGACCACTGGGCCCTCACACAGAGGACAGCCCGGGCTGTGTCCCCACAGTCCACAAAGCCCATGGCC 861
Query 457 -------------------------------------------------------------------------- 456
Sbjct 862 GAGTCCATCACGTATGCAGCCGTTGCCAGACACTGACCCCATACCCACCTGGCCTCTGCACCTGAGGGTAGAAA 935
Query 457 -------------------------------------------------------------------------- 456
Sbjct 936 GTCACTCTAGGAAAAGCCTGAAGCAGCCATTTGGAAGGCTTCCTGTTGGATTCCTCTTCATCTAGAAAGCCAGC 1009
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1010 CAGGCAGCTGTCCTGGAGACAAGAGCTGGAGACTGGAGGTTTCTAACCAGCATCCAGAAGGTTCGTTAGCCAGG 1083
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1084 TGGTCCCTTCTACAATCGAGCAGCTCCTTGGACAGACTGTTTCTCAGTTATTTCCAGAGACCCAGCTACAGTTC 1157
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1158 CCTGGCTGTTTCTAGAGACCCAGCTTTATTCACCTGACTGTTTCCAGAGACCCAGCTAAAGTCACCTGCCTGTT 1231
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1232 CTAAAGGCCCAGCTACAGCCAATCAGCCGATTTCCTGAGCAGTGATGCCACCTCCAAGCTTGTCCTAGGTGTCT 1305
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1306 GCTGTGAACCTCCAGTGACCCCAGAGACTTTGCTGTAATTATCTGCCCTGCTGACCCTAAAGACCTTCCTAGAA 1379
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1380 GTCAAGAGCTAGCCTTGAGACTGTGCTATACACACACAGCTGAGAGCCAAGCCCAGTTCTCTGGGTTGTGCTTT 1453
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1454 ACTCCACGCATCAATAAATAATTTTGAAGGCCTCACATCTGGCAGCCCCAGGCCTGGTCCTGGGTGCATAGGTC 1527
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1528 TCTCGGACCCACTCTCTGCCTTCACAGTTGTTCAAAGCTGAGTGAGGGAAACAGGACTTACGAAAACGTGTCAG 1601
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1602 CGTTTTCTTTTTAAAATTTAATTGATCAGGATTGTACGTATTCAAGGTGTAAAATGTGATAATTTGTCGTACAC 1675
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1676 GTACATTGTGCAATGACAGTCACAATCAATTCCTCAGCGCACCCATCGCCACAGATACGATACATTAGATATTC 1749
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1750 TGAACTTGCTCATCTTAGGACTTCACATTGGTGTCAGTGTTTTCTGACAAATCACGTGTATCAGGAATGAATGA 1823
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1824 GGGAGGTGTGGCTGGGTGAAGGCAGAGAGCCGACCCTACAGGTCCACATCTGCACATACATGCACAGGAATGCA 1897
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1898 TGCTCTCACACACATGCATACACACACGCACACACACAGACATGCACATACACTCACACGCCCCAGGAAATCCA 1971
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1972 AGGAATCACTGAGCCTGCTGTTGGTTGAGGCATTTCTGAGTATCCACCCTACCTGTAGGGTCAGATGTACTGAT 2045
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2046 TGACACAGAAAATTACCCTATGTACCACTAGGAGGCGGCAGAATCTCATTTGGGTTAATCTGTGTTTGTCTTTA 2119
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2120 AAAAACAAAAACAGGCCGGGCATGGAGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGAT 2193
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2194 CACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAAAATT 2267
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2268 AGCCGGGTGTGGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGGAGGAGAATGGCGTGAACCCGG 2341
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2342 GAGGCGGAGTTTGCAGTGAGCCGAGGTGGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCAAA 2415
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2416 AAAGAAAAGAAAAGAAAAGAAAGATTTTTAAGAATTCAGCAAAAACTCAGCCAGCTCTTTCTATGGGGCAGTTG 2489
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2490 CTAATTTAGTTCTAGGCAAACGTGGACACATTAAATTCTCCTACAAACCCTCCACAGCGTGCTCTATTATTTTC 2563
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2564 CTCATTTATAAAAACAGAAACTATGGACCGAGACATGAAGTAACCTGTCCAAGGTCGGCCAAGTCTCAGAGACA 2637
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2638 GGGGCTTCAGACCCACCTGAGGCTCCTGACTCCACATTATGAACCCCGGGATGGGCTGCAGCTCGGTCTGCTGG 2711
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2712 GAGGTTTCTGTGCTGGTTCAAAGAGGGTGGTACCTGACTGGCCTACCCAATTTTAATTTGTACTGAGCTTTAAT 2785
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2786 TTTCTATTTGTGCTCAGGTTTAATTTCCTCCTGGGATCTGCTTCCCAGTGCTGTACTCTGTATCTTTGCTTTCT 2859
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2860 TGTGTGAACATTGTGACCGATTTTCCCTGTTCTTCACGTGGGACACATTCTCCCTGCTCTGTCTGTCTCTGTCC 2933
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2934 CTGTCTCTCTTTCTGTCTTTCTCTCTCACTGTGTGTCTCTCTGTCTCTCTCTCTCTTTTTTTTTTTTTTTGAGA 3007
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3008 TGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCACAATCTTGGCTCACTGCAACCTCTGCCTCCCGG 3081
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3082 GTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGCAGCTGGGATTACAGGCATGCACCACCACACACGGCTAATT 3155
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3156 TTTTGTATTTTTGTTAGAGACGGGGGGCTCTCCATGTTGCTCAGGCTGGTCTTGAACTCCCGACCTCAGGTGAT 3229
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3230 CTGCCCACCTCAGCCTCCCAAAGTCCTGGGATTACAGGCATGAGCCACTGCGTCCAGCCGTCTTTGTCTCTTTT 3303
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3304 TCTACATCTCTGTCTTTCTTCTCTGGTTGTTTTTCAACCATCAGCTGGGTGTTTTCTCCCATAACGTCTTGTTT 3377
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3378 GTTTGACTATGAGGTTGACAGGTGGGTACATGAACTCTATAGCAGAAGGTGGACAGTCTGCACATAGCAGAGGA 3451
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3452 TGGGTGAATTTTTCTACCCCTTGCAGAGCACAGGAGAGCTGAGCAGATGCCAGTGTCTGCTCCAGTGTAAGGAA 3525
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3526 GTCCAGGAAGTTCAGGTGGTGAGGTCACAGTGGAAAGCAGGACAGATAGAGTTTAGGGGAAATTAAGCAAAAAT 3599
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3600 ACCACACTGTTATTTCTTGACATATTAGTGGAAAGAGGAAGGGCCCAGAGAGAAGACAGAAAATTAGATGCAGG 3673
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3674 GGCTTGTTTTTTCTCTTGACTTGCCAACCCGCCCAACGCAGGGGCCAGAACTCAGGGTGGTGAGATCTGGGAAC 3747
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3748 ATTGCTGTGCGGAGAAGATGTCCCTCCTGCTGCACGGGCCCCCAAGCACCACCTGGGGGAAGAGCCATGTTTAA 3821
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3822 TTCACCTGGCAGTGCAGTGTGGCCAGGCAGAGAGGGAGGGCCTACCCTGTGCTTATGATCCCACCCCAGTTCCC 3895
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3896 CTGGGGTGTGCCCTGGCGGTGAACACCAGGAGGCTGCAGTGGGGCCCAACGTGAAAGGGAGGAGCAGCCTCACC 3969
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3970 GGGGCCAGATGGGGCAGCAGCAGATATTCACAGATGTCCCTGTGAGTAACCAGGGCAGAGGCCAGGGGTCTGGC 4043
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4044 CTTCCCTTTCTTGGAGCCCTGGGCCAGCTGGGCAAGGCGTTGAGAGAAAGATTACCCGGTGACCTTTATCAAAG 4117
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4118 CAGAGTAAGGAGGGCTTTATTCAGAACCATCACTGTAGGTACCAGGACCCCAGCGGTGGGATTTTGTAGTAGGG 4191
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4192 GAAAGAAAATGGGCTCGACGTTGAATACAGCATGAACAAGTGAGAATGTTTGTTATACAAACTATAGGGTGGAC 4265
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4266 TTTTTTTTTCTTTTTTTTAACTTTTTTTTACCTTTTAGTGTAAAACTGAACATAGAAAATAAATTCATGAAGAA 4339
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4340 GGGATATTTTCTGAGGGTGTCCAGGGCTGCCCAACACCTCGTCTACCTTCTCTGTCATAGCCCCATTTAAAACA 4413
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4414 CTCTCTCTGGATGAATACACCAAACCTCACAGTCTTTGCTCTCTTGCTAGGAAGAGGAGCAAGAGCGTGTTTCA 4487
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4488 CTCTTGGCTCCTGCTTACACACCTGCTGTCCAATGGAAACTACTACTTAAGACATTTAAAAATAGTTGTGGTGA 4561
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4562 TAGCATGTTGTGTTTTGGTTGGTGATGCCAGTTAGTCTCTGAAAACTTTCTGTGATGAGTGTAAAATTCTACAC 4635
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4636 CTTAATCTCCTTTCTTGTAGGATCTGGGAAGCAGTATGCACTTGATTGCACCAAAGATTTTACGTTCATAGAAA 4709
Query 457 ------------------------------------------------------------------------ 456
Sbjct 4710 ATTTCTGGCATCTGTGTGAAGAAAGTAAACTATATCTTCCATTTAGACAAATAAAATATCTTTTTGATAAAA 4781
