Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_01615
• Subject: NM_177536.3
• Aligned Length: 915
• Identities: 585
• Gaps: 294

Alignment

Query   1  ATGGAGCTGATCCAGGACATCTCTCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACTTTGC  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  AGAGGCACTGGGGCCCCTGCAGAGCTTCCAGGCCCGGCCTGATGACCTGCTCATCAGCACCTACCCCAAGTCCG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  GCACCACCTGGGTGAGCCAGATTCTGGACA------TGATCTACCAGGGCGGTGACCTGGAAAAGTGTCACCGA  216
                               ||.||||.||      ||..|.||||||         |||         .|.|.
Sbjct   1  --------------------ATGCTGGCCAAGTTGCTGTGCGACCAGG---------TGG---------TCGGT  36

Query 217  GCTCCCATCTTCATGCGGGT---GCCCTTCCT---------TGAG--TTCAAAGTCCCAGGGATTCCCTCAGGG  276
           ||.||||||     || |||   |.|||| ||         ||||  |||     .|||||||       |.||
Sbjct  37  GCGCCCATC-----GC-GGTCTCGGCCTT-CTACGCCGGTATGAGCATTC-----TCCAGGGA-------AAGG  91

Query 277  ATGGA----------GACTCTGAAAAACACACCAGCCCCACGACTCCTGAAGACACACCTGCCCCTGGCTCTGC  340
           || ||          ||| ||||||             ||..|.|.|||.|   ||||||              
Sbjct  92  AT-GACATATTTTTGGAC-CTGAAA-------------CAGAAATTCTGGA---ACACCT--------------  133

Query 341  TCCCCCAGACTCTGTTGGATCAGAAGGTCAAGGTGGTCTATGTTGCCCGCAACGCAAAGGATGTGGCGGTTTCC  414
                             ||         |.||||||||||||||||||||||||||||||||||||.||||||
Sbjct 134  ------------------AT---------ATGGTGGTCTATGTTGCCCGCAACGCAAAGGATGTGGCAGTTTCC  180

Query 415  TACTACCACTTCTACCACATGGCCAAAGTGTACCCTCACCCTGGGACCTGGGAAAGCTTCCTGGAGAAGTTCAT  488
           ||||||||||||||||||||||||||.|||.|||||.|.||||||||||||||.||||||||||||||||||||
Sbjct 181  TACTACCACTTCTACCACATGGCCAAGGTGCACCCTGAGCCTGGGACCTGGGACAGCTTCCTGGAGAAGTTCAT  254

Query 489  GGCTGGAGAAGTGTCCTATGGGTCCTGGTACCAGCACGTGCAAGAGTGGTGGGAGCTGAGCCGCACCCACCCTG  562
           ||..||||||||||||||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 255  GGTCGGAGAAGTGTCCTACGGATCCTGGTACCAGCACGTGCAGGAGTGGTGGGAGCTGAGCCGCACCCACCCTG  328

Query 563  TTCTCTACCTCTTCTATGAAGACATGAAGGAGAACCCCAAAAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGG  636
           |||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 329  TTCTCTACCTCTTCTATGAAGACATGAAGGAGAACCCGAAAAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGG  402

Query 637  CGCTCCCTGCCAGAGGAGACTGTGGACCTCATGGTTGAGCACACGTCGTTCAAGGAGATGAAGAAGAACCCTAT  710
           ||||||||||||||||||||.||||||.||.|||||.|||||||||||||||||||||||||||||||||||||
Sbjct 403  CGCTCCCTGCCAGAGGAGACCGTGGACTTCGTGGTTCAGCACACGTCGTTCAAGGAGATGAAGAAGAACCCTAT  476

Query 711  GACCAACTACACCACCGTCCGCCGGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTG  784
           ||||||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477  GACCAACTACACCACCGTCCCCCAGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTG  550

Query 785  GGGACTGGAAGACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTATGCGGAGAAGATGGCAGGC  858
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551  GGGACTGGAAGACCACCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTATGCGGAGAAGATGGCAGGC  624

Query 859  TGCAGCCTCAGCTTCCGCTCTGAGCTG  885
           |||||||||||||||||||||||||||
Sbjct 625  TGCAGCCTCAGCTTCCGCTCTGAGCTG  651