Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_01968
• Subject: NM_001302442.1
• Aligned Length: 865
• Identities: 558
• Gaps: 206

Alignment

Query   1  ATGCAGCGGAGGTGGGTCTTCGTGCTGCTCGACGTGCTGTGCTTACTGGTCGCCTCCCTGCCCTTCGCTATCCT  74
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query  75  GACGCTGGTGAACGCCCCGTACAAGCGAGGATTTTACTGCGGGGATGACTCCATCCGGTACCCCTACCGTCCAG  148
                                                                                     
Sbjct   1  --------------------------------------------------------------------------  0

Query 149  ATACCATCACCCACGGGCTCATGGCTGGGGTCACCATCACGGCCACCGTCATCCTTGTCTCGGCCGGGGAAGCC  222
                               |||||||||||||.||||||.||.||.||||||||||||||....||.||||||
Sbjct   1  --------------------ATGGCTGGGGTCATCATCACAGCTACTGTCATCCTTGTCTCATTGGGAGAAGCC  54

Query 223  TACCTGGTGTACACAGACCGGCTCTATTCTCGCTCGGACTTCAACAACTACGTGGCTGCTGTATACAAGGTGCT  296
           ||||||||||||||||||||.||.|||||.||.||..|||||||||||||.||.|||||..|.|||||||||||
Sbjct  55  TACCTGGTGTACACAGACCGTCTTTATTCGCGATCCAACTTCAACAACTATGTAGCTGCCATCTACAAGGTGCT  128

Query 297  GGGGACCTTCCTGTTTGGGGCTGCCGTGAGCCAGTCTCTGACAGACCTGGCCAAGTACATGATTGGGCGTCTGA  370
           |||.|||||.|||||.||||||||.||||||||||||||.||.|||||||||||||||||||||||.|||||..
Sbjct 129  GGGAACCTTTCTGTTCGGGGCTGCTGTGAGCCAGTCTCTCACCGACCTGGCCAAGTACATGATTGGCCGTCTTC  202

Query 371  GGCCCAACTTCCTAGCCGTCTGCGACCCCGACTGGAGCCGGGTCAACTGCTCGGTCTATGTGCAGCTGGAGAAG  444
           |.||||..|||.|.||.|||||.|||||.||||||||||.|||||||||.||.|.||||||||||||||   ||
Sbjct 203  GACCCAGTTTCTTGGCTGTCTGTGACCCTGACTGGAGCCAGGTCAACTGTTCTGGCTATGTGCAGCTGG---AG  273

Query 445  GTGTGCAGGGGAAACCCTGCTGATGTCACCGAGGCCAGGTTGTCTTTCTACTCGGGACACTCTTCCTTTGGGAT  518
           |||||||||||.|.|||||||.|||||||.|||||||||.||||.||||||||.||.|||||.||||||||.||
Sbjct 274  GTGTGCAGGGGCAGCCCTGCTAATGTCACGGAGGCCAGGCTGTCCTTCTACTCTGGCCACTCCTCCTTTGGCAT  347

Query 519  GTACTGCATGGTGTTCTTGGCGCTGTATGTGCAGGCACGACTCTGTTGGAAGTGGGCACGGCTGCTGCGACCCA  592
           |||.||||||.|||||.|||||||.|||||||||||.||.|||||.|||||||||||||||||||||.|.||||
Sbjct 348  GTATTGCATGTTGTTCCTGGCGCTATATGTGCAGGCCCGGCTCTGCTGGAAGTGGGCACGGCTGCTGAGGCCCA  421

Query 593  CAGTCCAGTTCTTCCTGGTGGCCTTTGCCCTCTACGTGGGCTACACCCGCGTGTCTGATTACAAACACCACTGG  666
           |.||.|||||||||.|||||||||||||..||||.||||||||.|||||.||||||||..||||.|||||||||
Sbjct 422  CTGTTCAGTTCTTCTTGGTGGCCTTTGCAATCTATGTGGGCTATACCCGAGTGTCTGACCACAAGCACCACTGG  495

Query 667  AGCGATGTCCTTGTTGGCCTCCTGCAGGGGGCACTGGTGG-CTGCCCTCACTGTCTGCTACATCTCAGACTTCT  739
           ||.|||||||||||.||||||||||||||.||.||||||| ||| ||||||.|||.||||..|.|||||.||||
Sbjct 496  AGTGATGTCCTTGTCGGCCTCCTGCAGGGAGCCCTGGTGGCCTG-CCTCACGGTCCGCTATGTTTCAGATTTCT  568

Query 740  TCAAAGCCCGACCCCCACAGCACTGTCTGAAGGAGGAGGAGCTGGAACGGAAGCCCAGCCTGTCACTGACGTTG  813
           |||||.||||.||.||.||||.|||.|.|.||||.||.|.||.|||.||.||||||||.||||||||||||.||
Sbjct 569  TCAAATCCCGGCCACCCCAGCCCTGCCAGGAGGATGAAGTGCCGGAGCGCAAGCCCAGTCTGTCACTGACGCTG  642

Query 814  ACCCTGGGCGAGGCTGACCACAACCACTATGGATACCCGCACTCCTCCTCC  864
           |||||.||.||  |.||||.                               
Sbjct 643  ACCCTTGGTGA--CCGACCC-------------------------------  660