Construct: ORF ccsbBroadEn_01968

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009669.1_s300c1, BRDN0000386123
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PLPP2 (8612)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8612 PLPP2 phospholipid phosphatase 2 NM_003712.4 100% 100%
2 human 8612 PLPP2 phospholipid phosphatase 2 XM_011528396.2 97.9% 97.9% 52_69del
3 human 8612 PLPP2 phospholipid phosphatase 2 NM_177543.3 90% 86.4% (many diffs)
4 human 8612 PLPP2 phospholipid phosphatase 2 NM_177526.3 80.5% 80.5% 0_1ins168
5 mouse 50784 Plpp2 phospholipid phosphatase 2 NM_015817.3 81.1% 86.1% (many diffs)
6 mouse 50784 Plpp2 phospholipid phosphatase 2 NM_001302389.1 64.5% 67.7% (many diffs)
7 mouse 50784 Plpp2 phospholipid phosphatase 2 NM_001302442.1 64.5% 67.7% (many diffs)
8 mouse 50784 Plpp2 phospholipid phosphatase 2 NM_001302390.1 46% 47.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
930
ORF length:
864
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCA GCGGAGGTGG GTCTTCGTGC TGCTCGACGT GCTGTGCTTA CTGGTCGCCT
121CCCTGCCCTT CGCTATCCTG ACGCTGGTGA ACGCCCCGTA CAAGCGAGGA TTTTACTGCG
181GGGATGACTC CATCCGGTAC CCCTACCGTC CAGATACCAT CACCCACGGG CTCATGGCTG
241GGGTCACCAT CACGGCCACC GTCATCCTTG TCTCGGCCGG GGAAGCCTAC CTGGTGTACA
301CAGACCGGCT CTATTCTCGC TCGGACTTCA ACAACTACGT GGCTGCTGTA TACAAGGTGC
361TGGGGACCTT CCTGTTTGGG GCTGCCGTGA GCCAGTCTCT GACAGACCTG GCCAAGTACA
421TGATTGGGCG TCTGAGGCCC AACTTCCTAG CCGTCTGCGA CCCCGACTGG AGCCGGGTCA
481ACTGCTCGGT CTATGTGCAG CTGGAGAAGG TGTGCAGGGG AAACCCTGCT GATGTCACCG
541AGGCCAGGTT GTCTTTCTAC TCGGGACACT CTTCCTTTGG GATGTACTGC ATGGTGTTCT
601TGGCGCTGTA TGTGCAGGCA CGACTCTGTT GGAAGTGGGC ACGGCTGCTG CGACCCACAG
661TCCAGTTCTT CCTGGTGGCC TTTGCCCTCT ACGTGGGCTA CACCCGCGTG TCTGATTACA
721AACACCACTG GAGCGATGTC CTTGTTGGCC TCCTGCAGGG GGCACTGGTG GCTGCCCTCA
781CTGTCTGCTA CATCTCAGAC TTCTTCAAAG CCCGACCCCC ACAGCACTGT CTGAAGGAGG
841AGGAGCTGGA ACGGAAGCCC AGCCTGTCAC TGACGTTGAC CCTGGGCGAG GCTGACCACA
901ACCACTATGG ATACCCGCAC TCCTCCTCCT GCCCAACTTT CTTGTACAAA GTtggcatta
961taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)