Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02816
- Subject:
- NR_135907.2
- Aligned Length:
- 3343
- Identities:
- 1174
- Gaps:
- 2169
Alignment
Query 1 ----------------------------------------------------ATGGGCTGGATCACAGAAGATC 22
||||||||||||||||||||||
Sbjct 1 GTCATTCGAGGTCCGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGCGCCATGGGCTGGATCACAGAAGATC 74
Query 23 TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTATTAGACGGAATGCTGAACACAACGACTGTGTCATTTTTTCCCTGGAGGAACTCTCGTTGCATCAGCAAGAA 148
Query 97 ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAGAAAGACTAGAACACATTGATAAATGGTGCCGGGATTTAAAAATTCTCTATCTTCAAAATAATCTTATTGG 222
Query 171 GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAAATTGAAAATGTTAGCAAACTCAAGAAACTTGAATATTTGAATTTAGCTTTAAACAACATTGAAAAAATAG 296
Query 245 AAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATT 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAAACTTGGAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCAGCATT 370
Query 319 AAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTA 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAAAACTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTA 444
Query 393 TAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAATAGAGCCTTCAGAAAGGA 466
|||||||||||||||||||||||||||||||||||||
Sbjct 445 TAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAG------------------------------------- 481
Query 467 TTAAGGCATTGCAGGACTATTCAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAGATCACTGTCTTAAACGA 540
Sbjct 482 -------------------------------------------------------------------------- 481
Query 541 GCCAAACTCAAGGAAGAGGCTCAGAGGAAACACCAAGAAGAGGATAAAAATGAAGACAAGAGAAGTAACGCAGG 614
Sbjct 482 -------------------------------------------------------------------------- 481
Query 615 CTTTGATGGACGTTGGTACACAGACATCAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCAC 688
|||||||||||||||||||||||||||||||||||
Sbjct 482 ---------------------------------------TTCCTCTTTAGAGAGCAAAGACCACCTACAGGCAC 516
Query 689 CAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGT 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 517 CAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGCCCTGT 590
Query 763 TTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAG 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 TTGTTTACTCCTGAATCAAGATTGGAAACTCTTAGACACATGGAAAAACAACGGAAGAAACAGGAAAAATTAAG 664
Query 837 TGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGC 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 TGAAAAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATCACTGAAGATGGGAAAGCCCTAAATGTGAATGAGC 738
Query 911 CCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGAT 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 CCAAAATTGACTTCTCTTTGAAAGATAACGAAAAGCAGATCATCCTGGACCTTGCTGTCTATAGGTATATGGAT 812
Query 985 ACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGT 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 813 ACCTCTTTAATCGATGTTGATGTGCAACCAACTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTCAGCTTGT 886
Query 1059 CCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCA 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 CCTTCCTGCAGAAGTGAAACCCGATAGTAGTTCTGCTAAAAGATCTCAGACAACGGGTCATTTGGTCATCTGCA 960
Query 1133 TGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGC 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TGCCCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAAACTACCTCGGACAGGAGC 1034
Query 1207 AGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 AGAGAACAAACAAATACAAGAAGCAAGCACATGGAGAAACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA 1108
Query 1281 TGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGG 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1109 TGTGACTAACATAGTTCAAGAGAAAAAACACACACCCAGAAGACGACCTGAACCCAAAATTATACCAAGTGAGG 1182
Query 1355 AAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATT------------------------------ 1398
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 AAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTG 1256
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1257 AGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT 1330
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1331 TGTCAATATCGCTGCTCCAGTGTTTTAACTCTTACTTTGCATAGTAATATCCTTAAGATAGCTTAAAATTAAAA 1404
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1405 TGTATGTCTTAAATGCTATAACTCATCATTTACCTATAATAAAGGGTTGGTATTGAAAATGTTTAGTAAGATCA 1478
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1479 TAGAACTATTGCATAAAACACTGATTATAAATACTGTCTACTTATGCAAAGTATTAATTCATAGATAAAAGGAC 1552
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1553 TGAGTATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAGAAGTTAAAACTGTAATTTCAGACCCAATTGGAA 1626
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1627 TACTTTAATATGATTTTAAACAGCATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTA 1700
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1701 TAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCT 1774
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1775 TCAGCAAGTCCTTTAATTCTCTGAGCCTTAGTGGCTTCATGTATAATCTGGGAATAATAACACTTGCCTCACAG 1848
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1849 GTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGTACAGTGTCAGCCATACATTTAGAGCCTCTTCTCTCTCTC 1922
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1923 CTTCTTCCCTTTCTCCTCTCTCTTCTCCTCCCTTTCTCCTGTCTCTCCTCCTCCCTGCTCCTTCTTCCCCTCCC 1996
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 1997 TCCCCAATTACTTTTCTCCCCTTATTCTTTTTCTTCACCTTTTTACTCCCCATCCCACTCCTTCTCCTCTATTT 2070
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2071 CCTTCTTTACTTTTTTAATATCCTACCTCTTCTTTATCTAGAACATTATGAATTCAATATTTCACATACATTGT 2144
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2145 AGGACAAATTACTGTTACTCTGATCATGATATAGCAACATTTAAGTCAGTTTCCCCAAATATTCATTCAACAAA 2218
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2219 TACTTATTGAGCAACTATTGAGTGCTAGCCCCCTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAA 2292
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2293 TACATACACACAGACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAAGGGTGAT 2366
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2367 GGGTGCTTTTTCAGACAGGGCCTTTCTCTATTAAACAGGCTTCCAGTGGAAGACTCTGCTAATGTTTAGCAGAT 2440
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2441 AACCAAAATGCATCAGTTAGAAAAAAATATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAA 2514
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2515 TGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGAGAGGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTA 2588
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2589 GACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGAGAGGTCTATG 2662
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2663 GAAATTATCATGCTGCTGAAATTGTTGCCTCTATTTATCTGCTACCCTTCTGGTCCGTGGCCAAGATCCTGGTG 2736
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2737 GGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACACAGTGGTGGAGATC 2810
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2811 AAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAA 2884
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2885 CACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTA 2958
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2959 GCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACT 3032
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 3033 GTATTTAATTTCCACATAGAGAGAAAGCAAAATTATACTTTTGACCAAACTAATAGAATTATCCATTAAACAAA 3106
Query 1399 ------------- 1398
Sbjct 3107 CAAAACTGTGCCA 3119
