Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03090
- Subject:
- XM_017313458.1
- Aligned Length:
- 1056
- Identities:
- 559
- Gaps:
- 417
Alignment
Query 1 ATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAG 444
|||||||||.||||..|..|.|||..|
Sbjct 1 -----------------------------------------------ATGCACAATCTGATTGCAGACACACCG 27
Query 445 TTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGAT 518
||||||.||.|..|||||||||||||.|||||..|||||||.|.||||.|.||||||||.|||||.||||||||
Sbjct 28 TTCTGTGATGTGCTGGGAAGTAGTAACGGTGTCAACCAAGAGCGTTTTCCCAATGTGGTTAAAGGGGAAAAGAT 101
Query 519 TCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATG 592
||||||.||.||||||||||||||||||||||||||.||.|||||||||||.|||||||.||..||||||||||
Sbjct 102 TCTTCCAGTGTTTGATGAGCCACCAAATCCAACCAACGTTGAAGAGAGTTTAAAGAGAATTAGGGAAAACGATG 175
Query 593 CTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCT 666
|.|.||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||.||
Sbjct 176 CCCGTCTTGTTGAAGTTAATTTGAATAATATAAAAAATATCCCAATTCCAACTCTAAAAGATTTTGCAAAGACT 249
Query 667 TTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTT 740
||||||.|||||||.|||||||||..|||||||||.||.||||||.|||||||||||||.||.|||..||||||
Sbjct 250 TTGGAAGCCAACACGCATGTGAAACATTTCAGTCTCGCGGCCACCAGGAGCAATGACCCCGTGGCTGTTGCTTT 323
Query 741 TGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGA 814
||||||.||||||||||||||||||||||||||||||||||||.|||||||||||||.|||||.||.|..|||.
Sbjct 324 TGCAGATATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATATGGAGTCCAACTTCATCACAGGCGCAGGGG 397
Query 815 TTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAG 888
||.|.||||||||||||||.||.|||||||||||.||||||...|||||||||||||||||||||||.||||||
Sbjct 398 TTTTAGCACTGATTGATGCTTTGAGAGATAATGAGACCCTGATGGAGCTCAAGATTGACAATCAGAGACAGCAG 471
Query 889 TTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCA 962
|||||.||..|.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 TTGGGCACCTCAGTAGAATTAGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCA 545
Query 963 GTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGTGCGTAAGAGAC 1036
|||.||.|||||||||||.||||||||.|||||.||.||.|||||.||.|||||||||||||||||.|||||.|
Sbjct 546 GTTCACGCAGCAGGGACCCCGAACCAGGGCAGCCAACGCGATAACGAAGAACAATGACTTAGTGCGCAAGAGGC 619
Query 1037 GAGTTGAAGGAGATCACCAG 1056
||.||||||||||.||||||
Sbjct 620 GAATTGAAGGAGACCACCAG 639