Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03090
Subject:
XM_017313458.1
Aligned Length:
1056
Identities:
559
Gaps:
417

Alignment

Query    1  ATGGCACTGCCATTCCGTAAGGACTTAGAAAAGTACAAAGACCTTGATGAAGATGAGCTCCTTGGGAATCTGTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGAAACAGAACTGAAACAACTGGAAACTGTTTTGGATGATCTTGACCCCGAGAATGCCCTTCTGCCTGCAGGGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCCGGCAGAAGAACCAGACATCAAAGTCCACCACAGGGCCATTTGATAGAGAGCATCTCCTTTCATATCTGGAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AAAGAAGCATTGGAGCATAAAGACAGGGAAGACTATGTGCCCTACACTGGAGAAAAAAAAGGGAAAATATTTAT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCCCAAACAGAAACCTGTACAGACTTTTACAGAAGAAAAAGTGTCTCTTGATCCAGAATTAGAAGAAGCTTTGA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CAAGTGCTTCTGATACAGAATTGTGTGACCTCGCAGCAATTCTTGGGATGCACAATTTGATAACGAATACAAAG  444
                                                           |||||||||.||||..|..|.|||..|
Sbjct    1  -----------------------------------------------ATGCACAATCTGATTGCAGACACACCG  27

Query  445  TTCTGTAATATAATGGGAAGTAGTAATGGTGTTGACCAAGAACATTTTTCAAATGTGGTCAAAGGTGAAAAGAT  518
            ||||||.||.|..|||||||||||||.|||||..|||||||.|.||||.|.||||||||.|||||.||||||||
Sbjct   28  TTCTGTGATGTGCTGGGAAGTAGTAACGGTGTCAACCAAGAGCGTTTTCCCAATGTGGTTAAAGGGGAAAAGAT  101

Query  519  TCTTCCGGTATTTGATGAGCCACCAAATCCAACCAATGTAGAAGAGAGTTTGAAGAGAACTAAAGAAAACGATG  592
            ||||||.||.||||||||||||||||||||||||||.||.|||||||||||.|||||||.||..||||||||||
Sbjct  102  TCTTCCAGTGTTTGATGAGCCACCAAATCCAACCAACGTTGAAGAGAGTTTAAAGAGAATTAGGGAAAACGATG  175

Query  593  CTCATCTTGTTGAAGTTAATTTGAATAATATAAAGAATATCCCAATTCCAACCCTAAAAGATTTTGCAAAGGCT  666
            |.|.||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||.||
Sbjct  176  CCCGTCTTGTTGAAGTTAATTTGAATAATATAAAAAATATCCCAATTCCAACTCTAAAAGATTTTGCAAAGACT  249

Query  667  TTGGAAACCAACACACATGTGAAATGTTTCAGTCTTGCAGCCACCCGGAGCAATGACCCTGTTGCTACTGCTTT  740
            ||||||.|||||||.|||||||||..|||||||||.||.||||||.|||||||||||||.||.|||..||||||
Sbjct  250  TTGGAAGCCAACACGCATGTGAAACATTTCAGTCTCGCGGCCACCAGGAGCAATGACCCCGTGGCTGTTGCTTT  323

Query  741  TGCAGAAATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATGTGGAGTCCAACTTTATCACGGGAGTTGGGA  814
            ||||||.||||||||||||||||||||||||||||||||||||.|||||||||||||.|||||.||.|..|||.
Sbjct  324  TGCAGATATGCTGAAAGTGAACAAAACTTTGAAGAGCTTAAATATGGAGTCCAACTTCATCACAGGCGCAGGGG  397

Query  815  TTCTGGCACTGATTGATGCGTTAAGAGATAATGAAACCCTGGCAGAGCTCAAGATTGACAATCAGAGGCAGCAG  888
            ||.|.||||||||||||||.||.|||||||||||.||||||...|||||||||||||||||||||||.||||||
Sbjct  398  TTTTAGCACTGATTGATGCTTTGAGAGATAATGAGACCCTGATGGAGCTCAAGATTGACAATCAGAGACAGCAG  471

Query  889  TTGGGGACAGCTGTAGAATTGGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCA  962
            |||||.||..|.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  472  TTGGGCACCTCAGTAGAATTAGAAATGGCCAAGATGCTTGAGGAAAATACAAATATCCTTAAATTTGGATATCA  545

Query  963  GTTTACACAGCAGGGACCACGAACCAGAGCAGCTAATGCTATAACAAAAAACAATGACTTAGTGCGTAAGAGAC  1036
            |||.||.|||||||||||.||||||||.|||||.||.||.|||||.||.|||||||||||||||||.|||||.|
Sbjct  546  GTTCACGCAGCAGGGACCCCGAACCAGGGCAGCCAACGCGATAACGAAGAACAATGACTTAGTGCGCAAGAGGC  619

Query 1037  GAGTTGAAGGAGATCACCAG  1056
            ||.||||||||||.||||||
Sbjct  620  GAATTGAAGGAGACCACCAG  639