Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05088
- Subject:
- NM_001284355.3
- Aligned Length:
- 1494
- Identities:
- 891
- Gaps:
- 603
Alignment
Query 1 ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCTGCAGTGTAGACCCGCACAGGAGTTCAGCTTCGGGCCCCGGGCCTTGAAGGACGCTCTGGTCTCCACTGA 74
Query 75 CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGCAGCCCTGCAGCAGCTGTATGTGTCCGCCTTCTCCCCTGCCGAGCGGCTCTTCCTGGCCGAGGCCTACAACC 148
Query 149 CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCAGAGGACGCTCTTCTGCACCCTGCTCATCCGCACGGGCTTCGACTGGCTCCTGAGCCGACCCGAGGCTCCC 222
Query 223 GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGGACTTCCAGACCTTCCACGCCTCCCTGCAGCACCGGAAGCCCCGCCTGGCTCGGAAGCACATCTACCTACA 296
Query 297 GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCCGATAGACCTGAGCGAGGAGCCGGTGGGAAGCTCCCTGCTGCACCAGCTGTGCAGCTGCACAGAGGCCTTCT 370
Query 371 TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCTGGGCCTGCGCGTCAAGTGCCTGCCGTCGGTGGCAGCCGCGTCCATCCGCTGCTCCTCGCGGCCCAGCCGG 444
Query 445 GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACTCTGACAGGCTCCAGCTCCACACAGACGGCATCCTGTCCTTCTTGAAGAACAACAAGCCAGGGGACGCGCT 518
Query 519 GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGTGTGCTGGGCCTCACACTGTCTGACCTGTACCCCCATGAGGCCTGGAGCTTCACCTTCAGCAAGTTCCTTC 592
Query 593 CAGGGCACGAAGTGGGCGTCTGCAGCTTCGCCCGGTTCTCAGGGGAATTCCCGAAGTCGGGGCCCAGCGCCCCT 666
||||||||
Sbjct 593 CAGGGCAC------------------------------------------------------------------ 600
Query 667 GATCTGGCCCTGGTAGAGGCAGCAGCAGACGGCCCCGAGGCCCCCCTGCAGGACAGGGGCTGGGCCCTGTGCTT 740
Sbjct 601 -------------------------------------------------------------------------- 600
Query 741 CAGTGCCCTGGGGATGGTTCAGTGCTGCAAGGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT 814
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 ------------------------------GGTCACGTGCCACGAGCTCTGCCACCTTCTGGGCCTGGGGAACT 644
Query 815 GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 645 GCCGCTGGCTCCGCTGCCTCATGCAGGGTGCGCTCAGCCTGGACGAGGCCCTGCGGCGGCCCCTGGACCTCTGT 718
Query 889 CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCAGAGACTCTACACCTG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CCCATCTGCCTGAGGAAGCTGCAGCATGTCCTGGGTTTCAGGCTCATCGAGAGGTACCAGAGACTCTACACCTG 792
Query 963 GACTCAGGCGGTGGTGGGGACGTGGCCCAGCCAGGAGGCGGGGGAGCCGTCAGTGTGGGAGGACACCCCGCCTG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 GACTCAGGCGGTGGTGGGGACGTGGCCCAGCCAGGAGGCGGGGGAGCCGTCAGTGTGGGAGGACACCCCGCCTG 866
Query 1037 CCAGCGCCGACTCGGGCATGTGCTGTGAGAGTGACTCGGAGCCCGGCACCAGTGTGTCGGAGCCCCTCACCCCT 1110
|||||||||||||||||||||||||
Sbjct 867 CCAGCGCCGACTCGGGCATGTGCTG------------------------------------------------- 891
Query 1111 GATGCCGGGAGTCACACCTTCGCCTCAGGGCCAGAGGAAGGGCTGAGCTACCTGGCAGCCTCAGAGGCTCCGCT 1184
Sbjct 892 -------------------------------------------------------------------------- 891
Query 1185 GCCACCTGGGGGCCCTGCGGAGGCCATCAAGGAGCATGAACGGTGGCTGGCCATGTGCATCCAGGCCCTGCAGC 1258
Sbjct 892 -------------------------------------------------------------------------- 891
Query 1259 GGGAAGTGGCAGAGGAGGACCTGGTGCAGGTGGACAGAGCCGTGGACGCCCTCGACCGCTGGGAGATGTTCACG 1332
Sbjct 892 -------------------------------------------------------------------------- 891
Query 1333 GGCCAGCTCCCGGCCACCAGGCAGGACCCACCCAGCAGCAGGGACAGCGTGGGGCTGCGCAAGGTGCTGGGGGA 1406
Sbjct 892 -------------------------------------------------------------------------- 891
Query 1407 CAAGTTCTCCTCCCTGAGGAGGAAGCTGAGTGCCCGAAAACTCGCCAGAGCAGAGTCGGCCCCCCGTCCCTGGG 1480
Sbjct 892 -------------------------------------------------------------------------- 891
Query 1481 ATGGGGAAGAGAGT 1494
Sbjct 892 -------------- 891