Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_05803
- Subject:
- NM_001030010.3
- Aligned Length:
- 1308
- Identities:
- 1014
- Gaps:
- 168
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGACCCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACGCGGCCAGCTGAGTT 74
Query 1 -------------------------------------------ATGAAGGA-----TGAACCAC-----GGTCC 21
|..|||.| ||.||.|| ||.||
Sbjct 75 CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC 148
Query 22 ACGAACCT------GTTCATGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCTTTGGCCTGGTCCTCATCAT 89
| |.|||| |..||.|.||||||||||.|.|||||||.|||||||.|||||||||||||||||||||||
Sbjct 149 A-GGACCTGCACAAGGCCACGCAGCTGGACTCCGCCTTCATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCAT 221
Query 90 CGCACCCTGGAACTACCCACTGAACCTGACCCTGGTGCTCCTGGTGGGCGCCCTCGCCGCAGGGAGTTGCGTGG 163
.||.|||||||||||.||.|||||||||||.|||||||.|||.|||||.||||||||.|||||||..||.||||
Sbjct 222 TGCGCCCTGGAACTATCCGCTGAACCTGACGCTGGTGCCCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGG 295
Query 164 TGCTGAAGCCGTCAGAAATCAGCCAGGGCACAGAGAAGGTCCTGGCTGAGGTGCTGCCCCAGTACCTGGACCAG 237
||||||||||.||.||.||.|||.||..|...||||||.|||||||.||||||||||||||.|||.||||||||
Sbjct 296 TGCTGAAGCCATCGGAGATTAGCAAGAACGTCGAGAAGATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAG 369
Query 238 AGCTGCTTTGCCGTGGTGCTGGGCGGACCCCAGGAGACAGGGCAGCTGCTAGAGCACAAGTTGGACTACATCTT 311
|||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||.|||.|||||||||||
Sbjct 370 AGCTGCTTTGCTGTGGTGCTGGGCGGGCCCCAGGAGACGGGGCAGCTGCTAGAGCACAGGTTCGACTACATCTT 443
Query 312 CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTCATGACTGCTGCCACCAAGCACCTGACGCCTGTCACCCTGG 385
|||||||||||||||||||||||||||||||||.||||||||||||.|||||||||||||.|||||||||||||
Sbjct 444 CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTTATGACTGCTGCCGCCAAGCACCTGACACCTGTCACCCTGG 517
Query 386 AGCTGGGGGGCAAGAACCCCTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG 459
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 518 AGCTGGGGGGCAAGAACCCTTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG 591
Query 460 TTCTGCTACTTCAATGCCGGCCAGACCTGCGTGGCCCCTGACTACGTCCTGTGCAGCCCCGAGATGCAGGAGAG 533
|||.||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||
Sbjct 592 TTCCGCTACTTCAACGCCGGCCAGACCTGCGTGGCCCCCGACTACGTCCTATGCAGCCCTGAGATGCAGGAGAG 665
Query 534 GCTGCTGCCCGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC 607
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 GCTGCTGCCTGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC 739
Query 608 GCATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGCGTGGCCATTGGGGGCCAG 681
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 740 GCATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGTGTGGCCATTGGGGGCCAG 813
Query 682 AGCAACGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGACGTGCAGGAGACGGAGCCTGTGATGCAGGA 755
|||.|.||||||||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||||
Sbjct 814 AGCGATGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGATGTGCAGGAGATGGAGCCTGTGATGCAGGA 887
Query 756 GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCGTGGACGAGGCCATCAAGTTCATCAACTGGC 829
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.|||
Sbjct 888 GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCTTGGACGAGGCCATCGAGTTCATCAACCGGC 961
Query 830 AGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGACCAGC 903
.|||||||||||||||||||||||||||||||||||||||||||||.||.||.|.|.|||||...|.|||||||
Sbjct 962 GGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTGGTCAAGCGGGTGCTGACCCAGACCAGC 1035
Query 904 AGCGGCAGCTTTGGAGGCAATGAGGGCTTCACCTACATATCTCTGCTGTC--CGTGCCATTCGGGGGAGTCGGC 975
|||||..||||..|.||.||.||.|||||||...||||..|.||| |.| |.||||.||.||.|||||.||.
Sbjct 1036 AGCGGGGGCTTCTGTGGGAACGACGGCTTCATGCACATGACCCTG--GCCAGCCTGCCTTTTGGAGGAGTGGGT 1107
Query 976 CACAGTGGGATGGGCCGGTACCACGGCAAGTTCACCTTCGACACCTTCTCCCACCACCGCACCTGCCTGCT-CG 1048
..|||||||||||||||||||||.|||||||||.||||||||||||||||||||||.|||.|||||||.|| ||
Sbjct 1108 GCCAGTGGGATGGGCCGGTACCATGGCAAGTTCTCCTTCGACACCTTCTCCCACCATCGCGCCTGCCTCCTGCG 1181
Query 1049 CCCCCTCCGGCCTGGAGAAATTAAAGGAGATCCACTACCCACC-CTAT------ACCGACTGGAACCAGCA-GC 1114
|..|| |.||..|||||||..|.||.|...|||.||||||.|| |.|| .|||.||| ||.| ||
Sbjct 1182 CAGCC-CGGGGATGGAGAAGCTCAACGCCCTCCGCTACCCGCCGCAATCGCCGCGCCGCCTG-----AGGATGC 1249
Query 1115 TGTTACGCTG--GGGCATG--GGCTCCCAG-----AGCTGTACCCTCCTG 1155
| |||| ||.|||| ||| ||.|| |||||.||.||.||.
Sbjct 1250 T-----GCTGGTGGCCATGGAGGC-CCAAGGCTGCAGCTGCACACTGCTC 1293