Construct: ORF ccsbBroadEn_05803

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012862.1_s300c1, BRDN0000386185
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ALDH3B2 (222)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 222 ALDH3B2 aldehyde dehydrogenase 3 fa... NM_001031615.2 99.7% 99.4% 608A>G;826C>T;1146C>T
2 human 222 ALDH3B2 aldehyde dehydrogenase 3 fa... NM_001354345.1 99.7% 99.4% 608A>G;826C>T;1146C>T
3 human 221 ALDH3B1 aldehyde dehydrogenase 3 fa... NM_001030010.3 77.5% 72.8% (many diffs)
4 human 221 ALDH3B1 aldehyde dehydrogenase 3 fa... NM_000694.4 71.3% 68.5% (many diffs)
5 human 221 ALDH3B1 aldehyde dehydrogenase 3 fa... NM_001161473.3 71.3% 68.5% (many diffs)
6 human 221 ALDH3B1 aldehyde dehydrogenase 3 fa... NM_001290059.2 61% 57.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1221
ORF length:
1155
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GGATGAACCA CGGTCCACGA ACCTGTTCAT GAAGCTGGAC TCGGTCTTCA
121TCTGGAAGGA ACCCTTTGGC CTGGTCCTCA TCATCGCACC CTGGAACTAC CCACTGAACC
181TGACCCTGGT GCTCCTGGTG GGCGCCCTCG CCGCAGGGAG TTGCGTGGTG CTGAAGCCGT
241CAGAAATCAG CCAGGGCACA GAGAAGGTCC TGGCTGAGGT GCTGCCCCAG TACCTGGACC
301AGAGCTGCTT TGCCGTGGTG CTGGGCGGAC CCCAGGAGAC AGGGCAGCTG CTAGAGCACA
361AGTTGGACTA CATCTTCTTC ACAGGGAGCC CTCGTGTGGG CAAGATTGTC ATGACTGCTG
421CCACCAAGCA CCTGACGCCT GTCACCCTGG AGCTGGGGGG CAAGAACCCC TGCTACGTGG
481ACGACAACTG CGACCCCCAG ACCGTGGCCA ACCGCGTGGC CTGGTTCTGC TACTTCAATG
541CCGGCCAGAC CTGCGTGGCC CCTGACTACG TCCTGTGCAG CCCCGAGATG CAGGAGAGGC
601TGCTGCCCGC CCTGCAGAGC ACCATCACCC GTTTCTATGG CGACGACCCC CAGAGCTCCC
661CAAACCTGGG CCGCATCATC AACCAGAAAC AGTTCCAGCG GCTGCGGGCA TTGCTGGGCT
721GCGGCCGCGT GGCCATTGGG GGCCAGAGCA ACGAGAGCGA TCGCTACATC GCCCCCACGG
781TGCTGGTGGA CGTGCAGGAG ACGGAGCCTG TGATGCAGGA GGAGATCTTC GGGCCCATCC
841TGCCCATCGT GAACGTGCAG AGCGTGGACG AGGCCATCAA GTTCATCAAC TGGCAGGAGA
901AGCCCCTGGC CCTGTACGCC TTCTCCAACA GCAGCCAGGT TGTGAACCAG ATGCTGGAGC
961GGACCAGCAG CGGCAGCTTT GGAGGCAATG AGGGCTTCAC CTACATATCT CTGCTGTCCG
1021TGCCATTCGG GGGAGTCGGC CACAGTGGGA TGGGCCGGTA CCACGGCAAG TTCACCTTCG
1081ACACCTTCTC CCACCACCGC ACCTGCCTGC TCGCCCCCTC CGGCCTGGAG AAATTAAAGG
1141AGATCCACTA CCCACCCTAT ACCGACTGGA ACCAGCAGCT GTTACGCTGG GGCATGGGCT
1201CCCAGAGCTG TACCCTCCTG TGCCCAACTA TCTTGTACAA AGTtggcatt ataagaaagc
1261attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)