Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06449
- Subject:
- XM_006510034.3
- Aligned Length:
- 2716
- Identities:
- 1362
- Gaps:
- 1157
Alignment
Query 1 ATGCGTCCAATGCGAATTTTTGTGAATGATGACCGCCATGTGATGGCAAAGCATTCTTCCGTTTATCCAACACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGAGGAGCTGGAGGCAGTCCAGAACATGGTGTCCCACACGGAGCGGGCGCTCAAAGCTGTGTCCGACTGGATAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACGAGCAGGAAAAGGGTAGCAGCGAGCAGGCAGAGTCCGATAACATGGATGTGCCCCCAGAGGACGACAGTAAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GAAGGGGCTGGGGAACAGAAGACGGAGCACATGACCAGAACCCTGCGGGGAGTGATGCGGGTGGGCCTGGTGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AAAGGGCCTCCTACTCAAGGGGGACTTGGATCTGGAGCTGGTGCTGCTGTGTAAGGAGAAGCCCACAACCGCCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCTGGACAAGGTGGCCGACAACCTGGCCATCCAGCTTGCTGCTGTAACAGAAGACAAGTACGAAATACTGCAA 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TCTGTCGACGATGCTGCGATTGTGATAAAAAACACAAAAGAGCCTCCATTGTCCCTGACCATCCACCTGACATC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 CCCTGTTGTCAGAGAAGAAATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGACCCCCCGGACGTTC 592
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1 -------------------ATGGAGAAAGTATTAGCTGGAGAAACGCTATCAGTCAACGATCCCCCGGACGTTC 55
Query 593 TGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCCAGAGCCAACGGG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 56 TGGACAGGCAGAAATGCCTTGCTGCCTTGGCGTCCCTCCGACACGCCAAGTGGTTCCAGGCCAGAGCCAATGGA 129
Query 667 CTGAAGTCTTGTGTCATTGTGATCCGGGTCTTGAGGGACCTGTGCACTCGCGTGCCCACCTGGGGTCCCCTCCG 740
||||||||.|||||||||||.|||||.|||.|.||||||.||||.||.||.|||||||||||||||||||||.|
Sbjct 130 CTGAAGTCATGTGTCATTGTCATCCGTGTCCTAAGGGACTTGTGTACCCGAGTGCCCACCTGGGGTCCCCTCAG 203
Query 741 AGGCTGGCCTCTCGAGCTCCTGTGTGAGAAATCCATTGGCACGGCCAACAGACCGATGGGTGCTGGCGAGGCCC 814
|||.||||||||.|||||.|||||||||||.|||||.|||||.|||||.||.||.|||||||||||.||.||||
Sbjct 204 AGGATGGCCTCTGGAGCTGCTGTGTGAGAAGTCCATCGGCACTGCCAATAGGCCAATGGGTGCTGGTGAAGCCC 277
Query 815 TGCGGAGAGTGCTGGAGTGCCTGGCGTCGGGCATCGTGATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAA 888
|||||||||||||||||||||||||.||.||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 278 TGCGGAGAGTGCTGGAGTGCCTGGCATCCGGCATCGTAATGCCAGATGGTTCTGGCATTTATGACCCTTGTGAA 351
Query 889 AAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCACGC 962
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 352 AAAGAAGCCACTGATGCTATTGGGCATCTAGACAGACAGCAACGGGAAGATATCACACAGAGTGCGCAGCATGC 425
Query 963 ACTGCGGCTCGCTGCCTTCGGCCAGCTCCATAAAGTCCTAGGCATGGACCCTCTGCCTTCCAAGATGCCCAAGA 1036
.||||||||.||||||||.||.||.|||||||||||.||.||.||||||||.|||||||||||.||||||||||
Sbjct 426 TCTGCGGCTTGCTGCCTTTGGTCAACTCCATAAAGTACTGGGAATGGACCCCCTGCCTTCCAAAATGCCCAAGA 499
Query 1037 AACCAAAGAATGAAAACCCAGTGGACTACACCGTTCAGATCCCACCAAGCACCACCTATGCCATTACGCCCATG 1110
||||||||||.||.|||||.|||||||||||.|||||.||.||.||.||||||||||||||.||.||.||||||
Sbjct 500 AACCAAAGAACGAGAACCCGGTGGACTACACTGTTCAAATTCCTCCCAGCACCACCTATGCTATCACACCCATG 573
Query 1111 AAACGCCCAATGGAGGAGGACGGGGAGGAGAAGTCGCCCAGCAAAAAGAAGAAGAAGATTCAGAAGAAAGAGGA 1184
||||||||.|||||.|||||.||||||||||||||.||||||||.|||||.||||||||.||||||||||||||
Sbjct 574 AAACGCCCTATGGAAGAGGATGGGGAGGAGAAGTCTCCCAGCAAGAAGAAAAAGAAGATCCAGAAGAAAGAGGA 647
Query 1185 GAAGGCAGAGCCCCCCCAGGCTATGAATGCCCTGATGCGGTTGAACCAGCTGAAGCCAGGGCTGCAGTACAAGC 1258
||||||.||.||.||.||.||||||||||||||||||.||||.||.||||||||||||||||||||||||||||
Sbjct 648 GAAGGCTGATCCTCCTCAAGCTATGAATGCCCTGATGAGGTTAAATCAGCTGAAGCCAGGGCTGCAGTACAAGC 721
Query 1259 TGGTGTCCCAGACTGGGCCCGTCCATGCCCCCATCTTTACCATGTCTGTGGAGGTTGATGGCAATTCATTCGAG 1332
||.|.||||||||.||.||.||.|||||.||||||||.|||||||||||||||||.||.||||.|...||||||
Sbjct 722 TGATCTCCCAGACAGGCCCTGTTCATGCTCCCATCTTCACCATGTCTGTGGAGGTAGACGGCAGTAACTTCGAG 795
Query 1333 GCCTCTGGGCCCTCCAAAAAGACGGCCAAGCTGCACGTGGCCGTTAAGGTGTTACAGGACATGGGCTTGCCGAC 1406
|||||.|||||.||.||||||||.||||||||.||.||.||.||.||||||||||||||||||||||||||.||
Sbjct 796 GCCTCGGGGCCATCTAAAAAGACTGCCAAGCTTCATGTAGCTGTGAAGGTGTTACAGGACATGGGCTTGCCAAC 869
Query 1407 GGGTGCTGAAGGCAGGGACTCGAGCAAGGGGGAGGACTCGGCTGAGGAGACCGAGGCGAAGCCAGCAGTGGTGG 1480
.||.|||||||||||.|||||.|||||||||||.|||||.|||||||||.|.||.|.||||||||||.|.||||
Sbjct 870 AGGCGCTGAAGGCAGAGACTCCAGCAAGGGGGAAGACTCCGCTGAGGAGTCAGATGGGAAGCCAGCAATAGTGG 943
Query 1481 CCCCTGCCCCAGTGGTAGAAGCTGTCTCCACCCCTAGTGCGGCCTTTCCCTCAGATGCCACTGCCGAGAACGTA 1554
||||..||||.|||||.|||||||||||||.|||.|||.|.|.|||.||.||||||||||||.|.|
Sbjct 944 CCCCACCCCCTGTGGTGGAAGCTGTCTCCAACCCCAGTTCTGTCTTCCCTTCAGATGCCACTACTG-------- 1009
Query 1555 AAACAGCAGGGGCCGATCCTGACAAAGCACGGCAAGAACCCAGTCATGGAGCTGAACGAGAAGAGGCGTGGGCT 1628
|||||||.|||||..||||.|||||.|||||||||||.||.||||||||.||.||||||||.|||||.||
Sbjct 1010 ----AGCAGGGACCGATTTTGACTAAGCATGGCAAGAACCCTGTTATGGAGCTTAATGAGAAGAGACGTGGCCT 1079
Query 1629 CAAGTACGAGCTCATCTCCGAGACCGGGGGCAGCCACGACAAGCGCTTCGTCATGGAGGTCGAAGTGGATGGAC 1702
|||.||.||||||||.||.|||||.|||||||||||||||||..|.||.||.||||||||.||.|||||.||||
Sbjct 1080 CAAATATGAGCTCATTTCTGAGACGGGGGGCAGCCACGACAAAAGGTTTGTTATGGAGGTTGAGGTGGACGGAC 1153
Query 1703 AGAAGTTCCAAGGTGCTGGTTCCAACAAAAAGGTGGCGAAGGCCTACGCTGCTCTTGCTGCCCTAGAAAAGCTT 1776
|||||||.||||||||||||||.||||||||||||||.|||||.||.|||||.|||||.||..|||||||.|||
Sbjct 1154 AGAAGTTTCAAGGTGCTGGTTCAAACAAAAAGGTGGCAAAGGCTTATGCTGCACTTGCCGCATTAGAAAAACTT 1227
Query 1777 TTCCCTGACACCCCTCTCGCCCTTGATGCCAACAAAAAGAAGAGAGCCCCAGTACCCGTCAGAGGGGGACCGAA 1850
||||||||.||||||||.||.|||||.||||||||||||||.||..||||||||||.|||.||||.|||||.||
Sbjct 1228 TTCCCTGATACCCCTCTTGCTCTTGAAGCCAACAAAAAGAAAAGGACCCCAGTACCTGTCCGAGGTGGACCCAA 1301
Query 1851 ATTTGCTGCTAAGCCACATAACCCTGGCTTCGGCATGGGAGGCCCCATGCACAACGAAGTGCCCCCACCCCCCA 1924
|||||||||.||||||||.||||||||.||.||||||||||||||||||||.||.||||||||.|||||.||.|
Sbjct 1302 ATTTGCTGCCAAGCCACACAACCCTGGTTTTGGCATGGGAGGCCCCATGCATAATGAAGTGCCGCCACCTCCTA 1375
Query 1925 ACCTTCGAGGGCGGGGAAGAGGCGGGAGCATCCGGGGACGAGGGCGCGGGCGAGGATTTGGTGGCGCCAACCAT 1998
||.|.|||||.|||||..||||.||.|.||||||.||.|||||.||.|||||||||||||||||||||||||||
Sbjct 1376 ACATCCGAGGTCGGGGCCGAGGAGGTAACATCCGAGGGCGAGGACGGGGGCGAGGATTTGGTGGCGCCAACCAT 1449
Query 1999 ---GGAGGCTACATGAATGCCGGTGCTGGGTATGGAAGCTATGGGTACGGAGGCAACTCTGCGACAGCAGGCTA 2069
|||||||||||||||||.||||||||.||||||||||||||||||.|..||||.||.||.|||||||||||
Sbjct 1450 GGAGGAGGCTACATGAATGCTGGTGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGGCTA 1523
Query 2070 CAGTGACTTTTTCACAG-ACTGCTACGGCTATCATGATTTTGGGTCTTCC------------------------ 2118
||||.|.||.| |||| |.|| .|.||| |||.||||..|.||
Sbjct 1524 CAGTCAGTTCT--ACAGCAATG-GAGGGC-------ATTCTGGGAATGCCGGTGGTGGAGGCAGCGGGGGAGGT 1587
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1588 GGTGGCTCATCCAGCTACAGCTCCTACTACCAAGGAGACAGCTACAACTCACCAGTACCCCCGAAGCATGCTGG 1661
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1662 GAAGAAGCCGCTGCATGGGGGCCAGCAGAAAGCCTCCTACAGCTCGGGCTACCAGTCCCACCAGGGCCAGCAGC 1735
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1736 AACCTTACAACCAGAGCCAGTACAGCAGCTACGGCACGCCACAGGGCAAGCAGAAAGGCTATGGCCATGGGCAG 1809
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1810 GGCAGCTACTCCTCCTACTCCAACTCTTACAACTCCCCAGGTGGTGGTGGGGGCTCTGACTACAGCTACGACAG 1883
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1884 CAAATTCAACTACAGTGGGAGTGGAGGCCGGAGTGGAGGCAACAGCTATGGCTCCAGCGGGTCATCGTCCTACA 1957
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 1958 ACACAGGCTCACATGGAGGCTATGGCACAGGCTCCGGAGGCAGCTCTTCATACCAAGGCAAACAAGGAGGCTAC 2031
Query 2119 -------------------------------------------------------------------------- 2118
Sbjct 2032 TCATCACAGTCAAACTACAGCTCACCTGGGTCCAGCCAGAGCTACAGTGGTCCTGCCAGCTCCTACCAGTCCTC 2105
Query 2119 ---------------------------------------------------- 2118
Sbjct 2106 ACAGGGTGGCTACAGTCGGAACACAGAGCACAGCATGAACTACCAGTACAGA 2157
