Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06818
Subject:
XR_001753731.1
Aligned Length:
3551
Identities:
2455
Gaps:
1087

Alignment

Query    1  ---------------ATGGCTGGGGCTGGCGGGG-------------------GCCTCGGGGT--CTGGG----  34
                           ||||        |||||||                   .||||||..|  |||||    
Sbjct    1  ATGCAAGGGTGACTCATGG--------GGCGGGGACCAGCCGCTCCTCCCAGCCCCTCGGCCTCACTGGGCGGA  66

Query   35  GGAACCTGGT------GCTG------------------------CTGGGCCTGTGCAGCTGGACAGGGGCCAGG  78
            |||  .||||      ||||                        |.||||||||||||||||||||||||||||
Sbjct   67  GGA--GTGGTTGAGAGGCTGACTCCGTTTTCTCTGGGTTCCCTCCAGGGCCTGTGCAGCTGGACAGGGGCCAGG  138

Query   79  GCGCCT---------------------GCCCCCAACCCAGGGAGGAACCTGACAGTGGAGACTCAGACCACCAG  131
            ||||||                     |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  139  GCGCCTGACCTTCCTTCCCAATTCTCAGCCCCCAACCCAGGGAGGAACCTGACAGTGGAGACTCAGACCACCAG  212

Query  132  CTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCCTAGACTCACAGAACTCCAACTACTGGGTTCAGTGTACTG  205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  213  CTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCCTAGACTCACAGAACTCCAACTACTGGGTTCAGTGTACTG  286

Query  206  GAGACGGCGGCACAACAGAGACTCGAAACACAACAGCCACCAACGTCACCGTGGATGGCCTTGGACCCGGGTCA  279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  287  GAGACGGCGGCACAACAGAGACTCGAAACACAACAGCCACCAACGTCACCGTGGATGGCCTTGGACCCGGGTCA  360

Query  280  TTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGGGACTGTCACTACTGCCACAGC  353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  361  TTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGGGACTGTCACTACTGCCACAGC  434

Query  354  TCCCAACCCAGTGAGGAACCTGAGAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTGACCTGGGAGGTCCCCG  427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  435  TCCCAACCCAGTGAGGAACCTGAGAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTGACCTGGGAGGTCCCCG  508

Query  428  ACGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAGAGCAGGGACTCGAAGC  501
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  509  ACGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAGAGCAGGGACTCGAAGC  582

Query  502  ACAGCACACACCAACATCACCGTGGATGGACTTGAACCCGGGTGTTTGTATGCGTTTTCCATGTGGGTGGGAAA  575
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  583  ACAGCACACACTAACATCACCGTGGATGGACTTGAACCCGGGTGTTTGTATGCGTTTTCCATGTGGGTGGGAAA  656

Query  576  GAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCTCACAACCCAGTGAGGAACCTGAGAGTGG  649
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  657  GAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCTCACAACCCAGTGAGGAACCTGAGAGTGG  730

Query  650  AGGCTCAGACCACCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCACAGACCCACAGAACTCCACCTAC  723
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  731  AGGCTCAGACCACCAGCTCCATCTCCCTGAGCTGGGAGGTCCCCGATGGCACAGACCCACAGAACTCGACCTAC  804

Query  724  TGCGTTCAGTGCACTGGAGATGGTGGCAGAACAGAGACTCGAAACACAACAGACACCAGAGTCACCGTGGATGG  797
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  805  TGCGTTCAGTGCACTGGAGATGGTGGCAGAACAGAGACTCGAAACACAACAGACACCAGAGTCACCGTGGATGG  878

Query  798  CCTTGGACCCGGGTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGAGATTG  871
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  879  CCTTGGACCCGGGTCATTGTATACGTGTTCTGTGTGGGTGGAGAAAGACGGAGTAAATAGCTCTGTGGAGATTG  952

Query  872  TCACTAGTGCCACAGCTCCCAACCCAGTGAGAAACCTGACAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTG  945
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  953  TCACTAGTGCCACAGCTCCCAACCCAGTGAGAAACCTGACAGTGGAGGCTCAGACCAACAGCTCCATCGCCCTG  1026

Query  946  ACCTGGGAGGTCCCCGATGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAG  1019
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027  ACCTGGGAGGTCCCCGATGGCCCAGACCCACAGAACTCCACCTACGGGGTTGAGTACACTGGAGATGGTGGCAG  1100

Query 1020  AGCAGGGACTCGAAGCACAGCATACACCAACATCACCGTGGATAGACTTGAACCCGGGTGTTTGTATGTGTTTT  1093
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1101  AGCAGGGACTCGAAGCACAGCACACACCAACATCACCGTGGATAGACTTGAACCCGGGTGTTTGTATGTGTTTT  1174

Query 1094  CCGTGTGGGTGGGGAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCCCCCAACCCAGTG  1167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175  CCGTGTGGGTGGGGAAGAATGGAATCAACAGCTCCCGGGAGACTCGAAATGCCACCACAGCCCCCAACCCAGTG  1248

Query 1168  AGAAACCTCCATATGGAGACTCAGACCAACAGCTCCATCGCCCTATGCTGGGAAGTCCCCGATGGCCCATACCC  1241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249  AGAAACCTCCATATGGAGACTCAGACCAACAGCTCCATCGCCCTATGCTGGGAAGTCCCCGATGGCCCATACCC  1322

Query 1242  TCAGGACTACACCTACTGGGTAGAGTACACTGGAGACGGTGGTGGCACAGAGACCCGAAACACAACAAATACCA  1315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1323  TCAGGACTACACCTACTGGGTAGAGTACACTGGAGACGGTGGTGGCACAGAGACCCGAAACACAACAAATACCA  1396

Query 1316  GTGTGACAGCTGAGAGACTTGAGCCCGGAACCTTGTACACATTCTCTGTATGGGCAGAAAAAAATGGAGCACGT  1389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397  GTGTGACAGCTGAGAGACTTGAGCCCGGAACCTTGTACACATTCTCTGTATGGGCAGAAAAAAATGGAGCACGT  1470

Query 1390  GGCTCCAGGCAGAATGTCAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAA  1463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1471  GGCTCCAGGCAGAATGTCAGCATCTCCACAGTCCCCAACGCAGTGACAAGCCTCAGCAAGCAGGACTGGACCAA  1544

Query 1464  CAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCATGGG  1537
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545  CAGCACCATTGCTTTGCGCTGGACAGCTCCCCAGGGCCCAGGCCAGTCTTCCTACAGCTACTGGGTCTCATGGG  1618

Query 1538  TCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACTGGAAGCT  1611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619  TCAGGGAAGGCATGACTGACCCCAGGACCCAAAGCACCTCAGGTACTGACATCACCCTAAAGGAACTGGAAGCT  1692

Query 1612  GGCAGCCTGTACCACCTCACCGTCTGGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCACCCTCACTGCAGC  1685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693  GGCAGCCTGTACCACCTCACCGTCTGGGCCGAGAGGAATGAGGTCAGAGGCTATAACAGCACCCTCACTGCAGC  1766

Query 1686  CACTGCTCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGGAAGG  1759
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767  CACTGCTCCCAATGAGGTCACAGATCTCCAGAATGAAACTCAGACTAAGAACTCAGTCATGCTGTGGTGGAAGG  1840

Query 1760  CCCCTGGAGACCCCCACTCTCAGTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAGGGGG  1833
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1841  CCCCTGGAGACCCCCACTCTCAGTTGTACGTATACTGGGTCCAGTGGGCCAGCAAGGGACATCCCCGGAGGGGG  1914

Query 1834  CAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGA  1907
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915  CAAGATCCCCAAGCGAATTGGGTCAACCAGACCAGCAGGACCAATGAGACGTGGTACAAAGTGGAGGCCCTGGA  1988

Query 1908  ACCCGGGACGCTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTG  1981
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1989  ACCCGGGACGTTGTACAATTTCACCGTGTGGGCAGAGAGGAATGACGTAGCCAGTTCCACGCAGAGCCTCTGTG  2062

Query 1982  CGTCCACATACCCAGACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTTGATC  2055
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2063  CGTCCACATACCCAGACACAGTCACCATCACTTCCTGTGTCAGCACCTCAGCGGGCTATGGAGTCAACTTGATC  2136

Query 2056  TGGTCCTGCCCCCAGGGAGGCTACGAGGCCTTTGAGTTGGAGGTGGGAGGACAGCGGGGCTCCCAGGACAGATC  2129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137  TGGTCCTGCCCCCAGGGAGGCTACGAGGCCTTTGAGTTGGAGGTGGGAGGACAGCGGGGCTCCCAGGACAGATC  2210

Query 2130  TTCATGTGGGGAGGCTGTGTCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCT  2203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2211  TTCATGTGGGGAGGCTGTGTCTGTGTTGGGTCTCGGGCCGGCTCGGTCCTACCCAGCCACCATCACGACCATCT  2284

Query 2204  GGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGGGTCATTGCCGGAGCCTTT  2277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2285  GGGACGGAATGAAGGTCGTGTCTCACTCTGTGGTCTGCCACACCGAGAGTGCAGGGGTCATTGCCGGAGCCTTT  2358

Query 2278  GTGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCTGCTGATTTTCTTCCTGAAGAGGAGGAATAAGAAGAAGCA  2351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2359  GTGGGCATCCTCCTGTTTCTCATCCTCGTGGGCCTGCTGATTTTCTTCCTGAAGAGGAGGAATAAGAAGAAGCA  2432

Query 2352  GCAGAAACCAGAACTCAGGGATCTGGTCTTTAG-----------------------------------------  2384
            |||||||||||||||||||||||||||||||||                                         
Sbjct 2433  GCAGAAACCAGAACTCAGGGATCTGGTCTTTAGACAGGGAGGCCACGACGATTTTGGAGAAAGGTGTTCCCTGG  2506

Query 2385  --------------------------------------------------------------------------  2384
                                                                                      
Sbjct 2507  AGTAGTGGATATAGACTCCAAGCCATGGTGATAGGATGACAGGAAGGAGAAAAAAACTGGTCTGCATGAGAAGT  2580

Query 2385  CTCCCCAGGGGACATCCCAGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTT  2458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2581  CTCCCCAGGGGACATCCCAGCTGAAGACTTCGCTGACCACGTCAGGAAGAATGAGAGGGACAGCAACTGTGGTT  2654

Query 2459  TTGCAGACGAGTACCAGCAACTCTCCCTGGTGGGCCACAGCCAGTCTCAGATGGTGGCTTCGGCTTCAGAGAAC  2532
            ||||||||||||||||                                                          
Sbjct 2655  TTGCAGACGAGTACCA----------------------------------------------------------  2670

Query 2533  AACGCCAAGAACCGCTACAGAAATGTGCTGCCCTATGACTGGTCCCGGGTGCCCCTGAAGCCCATCCATGAGGA  2606
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2607  GCCAGGCTCTGACTACATCAATGCCAGCTTCATGCCCGGTCTCTGGAGCCCCCAGGAGTTCATTGCAACCCAGG  2680
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2681  GTCCCCTGCCACAGACAGTGGGTGACTTCTGGCGCCTGGTGTGGGAACAGCAGAGCCACACCCTGGTCATGCTG  2754
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2755  ACCAACTGCATGGAGGCCGGCCGGGTGAAGTGTGAGCATTACTGGCCTCTGGACTCGCAGCCCTGCACCCATGG  2828
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2829  GCACCTGCGGGTAACCCTGGTAGGTGAGGAAGTGATGGAGAACTGGACGGTGCGGGAACTGCTGCTCCTCCAGG  2902
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2903  TGGAGGAGCAGAAGACACTGTCTGTGCGCCAATTCCACTACCAGGCCTGGCCGGATCACGGCGTTCCCTCCTCC  2976
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 2977  CCAGACACCTTGCTGGCTTTCTGGAGGATGCTTCGGCAGTGGCTGGATCAGACCATGGAGGGAGGCCCACCCAT  3050
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 3051  TGTGCACTGCAGTGCTGGCGTGGGTCGCACAGGAACCCTCATTGCCCTGGACGTCCTGCTCCGGCAGCTGCAGT  3124
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 3125  CCGAGGGTCTCCTTGGGCCCTTCAGCTTTGTAAGGAAGATGAGAGAGAGTCGGCCGTTGATGGTGCAGACTGAG  3198
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 3199  GCTCAGTACGTATTCCTGCATCAGTGCATCCTGCGGTTCCTCCAACAGTCAGCCCAGGCCCCAGCCGAGAAGGA  3272
                                                                                      
Sbjct 2671  --------------------------------------------------------------------------  2670

Query 3273  AGTCCCGTATGAGGATGTCGAAAACCTCATCTACGAGAACGTGGCCGCCATCCAGGCCCACAAGTTGGAGGTC  3345
                                                                                     
Sbjct 2671  -------------------------------------------------------------------------  2670

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