Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_06984
- Subject:
- XM_005254611.3
- Aligned Length:
- 1673
- Identities:
- 1077
- Gaps:
- 583
Alignment
Query 1 ATGGCGTCGGGTGGTGGTGGCTGTAGCGCTTCGGAGAGACTGCCTCCGCCCTTCCCCGGCCTGGAGCCGGAGTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGAGGGGGCGGCCGGGGGATCAGAACCCGAGGCTGGGGACAGCGACACCGAGGGGGAGGACATTTTCACCGGCG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CCGCGGTGGTCAGTAAACATCAGTCTCCAAAGATAACTACATCCCTTCTTCCCATCAACAATGGCTCCAAAGAA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AATGGGATCCATGAAGAACAAGACCAAGAGCCACAGGATCTCTTTGCAGATGCCACAGTGGAGCTATCCTTGGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGCACACAAAATAATCAGAAGAAGGTGCTAGCCAAAACACTCATTTCTCTTCCTCCTCAGGAAGCCACAAATT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CTTCGAAGCCCCAGCCAACCTATGAGGAGCTAGAGGAAGAAGAACAGGAGGATCAATTTGATTTGACAGTCGGT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATAACTGATCCTGAGAAGATAGGGGATGGTATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTT 518
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------ATGAATGCATATGTAGCCTACAAAGTTACAACACAGACAAGCTT 44
Query 519 ACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45 ACCATTGTTCAGAAGCAAACAGTTTGCAGTAAAAAGAAGATTTAGTGACTTTCTGGGTCTTTATGAGAAGCTTT 118
Query 593 CCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCACCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTG 666
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 119 CCGAGAAGCACTCTCAGAATGGCTTCATTGTCCCTCCGCCCCCGGAGAAGAGCCTCATAGGGATGACAAAAGTG 192
Query 667 AAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 AAAGTTGGGAAGGAAGATTCTTCTTCTGCAGAATTTCTTGAAAAACGGAGGGCCGCTTTAGAAAGGTACCTTCA 266
Query 741 GAGGATTGTAAATCATCCTACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAGAGCTGCCAC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 267 GAGGATTGTAAATCATCCTACCATGTTACAGGACCCTGACGTCAGAGAGTTCTTGGAAAAAGAAGAGCTGCCAC 340
Query 815 GTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 341 GTGCCGTGGGTACCCAGACATTGAGTGGTGCTGGTCTCCTCAAGATGTTCAACAAAGCCACAGATGCCGTCAGC 414
Query 889 AAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 AAAATGACCATCAAGATGAATGAATCAGACATTTGGTTTGAGGAGAAGCTCCAGGAGGTAGAGTGTGAGGAGCA 488
Query 963 GCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAACACAGCCC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 489 GCGCTTACGGAAACTGCATGCTGTTGTAGAAACTCTAGTCAACCATAGGAAAGAGCTAGCGCTGAACACAGCCC 562
Query 1037 AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTG 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 AGTTTGCAAAGAGTCTAGCCATGCTTGGGAGCTCTGAGGACAACACGGCATTGTCACGGGCACTCTCCCAGCTG 636
Query 1111 GCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGAGCT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 GCTGAGGTGGAAGAAAAAATTGAGCAGCTCCACCAGGAACAGGCCAACAATGACTTCTTCCTCCTTGCTGAGCT 710
Query 1185 CCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 CCTGAGTGACTACATTCGCCTCCTGGCCATAGTCCGCGCTGCCTTCGACCAGCGCATGAAGACATGGCAGCGCT 784
Query 1259 GGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 785 GGCAGGATGCCCAAGCCACACTGCAGAAGAAGCGGGAGGCCGAGGCTCGGCTGCTGTGGGCCAACAAGCCTGAT 858
Query 1333 AAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 859 AAGCTGCAGCAGGCCAAGGACGAGATCCTCGAGTGGGAGTCTCGGGTGACTCAATATGAAAGGGACTTCGAGAG 932
Query 1407 GATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCACGTGA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 933 GATTTCAACAGTGGTCCGAAAAGAAGTGATACGGTTTGAGAAAGAGAAATCCAAGGACTTCAAGAACCACGTGA 1006
Query 1481 TCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCA-GCTGGCAA--AGTACTGGGAA----GCCT------- 1540
||||||||||||||||||||||||||||||||||||| |||||..| ||| |||||| |.||
Sbjct 1007 TCAAGTACCTTGAGACACTCCTTTACTCACAGCAGCAGGCTGGGGAGCAGT--TGGGAATCAGGTCTGGAATAC 1078
Query 1541 TCC-----------TTCCTGAGGCA----AAGGCCATCTCC--------------------------------- 1566
||| ||.|..|||.| |||....||||.
Sbjct 1079 TCCTAACCAAGAAGTTGCCCAGGTATAGTAAGTTTTTCTCTACCGTTCACAAGTTTTGTGCTGCTGCTTCCCTC 1152
Query 1567 --------------------------------------------- 1566
Sbjct 1153 TGGAAATGGGGTTTCTTTCTCTCCGCCTACCTCAGCTACCTGTTC 1197
