Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_07930
• Subject: XM_006522446.3
• Aligned Length: 1570
• Identities: 885
• Gaps: 551

Alignment

Query    1  ATGGGGAAGCGACAGCACCAAAAGGACAAAATGTACATTACCTGTGCTGAATACACTCACTTTTATGGTGGCAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAAGCCAGATCTCCCACAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCAGCCCTTTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCTACCCAGTCTGCACTCCCGATGGCATCGTCTTTGACTTACTGAACATTGTTCCATGGCTTAAGAAGTACGGG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ACCAACCCCAGCAATGGAGAGAAGCTGGACGGGAGGTCCCTGATCAAGCTGAACTTTTCCAAGAACAGTGAGGG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GAAGTACCACTGCCCAGTGCTGTTTACCGTGTTCACCAACAACACCCACATCGTGGCTGTGAGGACGACCGGCA  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  ACGTCTACGCCTATGAGGCAGTGGAACAGCTAAATATCAAGGCCAAGAACTTCCGGGACCTGCTGACCGACGAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CCCTTCTCCCGGCAGGACATCATCACCCTCCAGGACCCCACCAATTTGGACAAGTTCAATGTCTCTAACTTCTA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TCATGTGAAGAATAACATGAAAATAATAGACCCAGATGAAGAGAAGGCCAAACAGGACCCGTCTTATTATCTGA  592
                            ||||.||||||||||||||||||.||.|||||||||||.|||||.|||||||||.|||
Sbjct    1  ----------------ATGAGAATAATAGACCCAGATGAGGAAAAGGCCAAACAAGACCCATCTTATTATTTGA  58

Query  593  AAAATACAAATGCCGAGACCCGAGAGACCCTGCAGGAGCTCTACAAGGAGTTCAAAGGGGACGAGATTCTGGCA  666
            ||||.||||||.|.|||||..|||||||.||.||||||||||||||.|||||||||||.||.||||||.|.|||
Sbjct   59  AAAACACAAATTCGGAGACGAGAGAGACGCTACAGGAGCTCTACAAAGAGTTCAAAGGAGATGAGATTTTAGCA  132

Query  667  GCCACCATGAAGGCC-CCGGAGAAGAAGAAAGTGGACAAGCTGAACGCTGCCCACTATTCCACAGGGAAGGTCA  739
            ||.|||||| ||||| ||.|||||||||||.||||||.|.|||||.||.||||||||.||||||||||||||||
Sbjct  133  GCTACCATG-AGGCCACCTGAGAAGAAGAAGGTGGACCAACTGAATGCGGCCCACTACTCCACAGGGAAGGTCA  205

Query  740  GCGCTTCCTTCACCTCCACCGCGATGGTCCCGGAGACCACACATGAAGCAGCTGCCATCGACGAGGATGTGCTG  813
            |.||.|||||||||||.||.||.|||||.||.||||||||.|||||||||||||.|||.||.||.|||||.|||
Sbjct  206  GTGCATCCTTCACCTCTACTGCCATGGTGCCCGAGACCACGCATGAAGCAGCTGTCATTGATGAAGATGTACTG  279

Query  814  CGCTACCAGTTTGTGAAGAAGAAGGGCTACGTGCGGCTGCACACCAACAAGGGCGACCTCAACCTGGAGCTGCA  887
            ||||||||||||||||||||.||||||||.||..||||.||||||||||||||||||||.|||.|.||||||||
Sbjct  280  CGCTACCAGTTTGTGAAGAAAAAGGGCTATGTAAGGCTTCACACCAACAAGGGCGACCTTAACTTAGAGCTGCA  353

Query  888  CTGCGACCTGACACCAAAAACCTGCGAAAACTTCATCAGGCTTTGCAAGAAGCATTATTACGATGGCACCATCT  961
            |||.||||||||||||||||||||.|||||||||||||.|||.||||||||.||.|||||.|||||.|||||||
Sbjct  354  CTGTGACCTGACACCAAAAACCTGTGAAAACTTCATCAAGCTCTGCAAGAAACAGTATTATGATGGTACCATCT  427

Query  962  TCCACAGATCCATCCGGAACTTTGTGATCCAAGGGGGCGACCCCACAGGCACAGGCACGGGTGGGGAGTCATAC  1035
            |.|||||.||||||.||||||||||||||||.||.||.|||||||||||.||||||||.|||||.|||||||.|
Sbjct  428  TTCACAGGTCCATCAGGAACTTTGTGATCCAGGGCGGTGACCCCACAGGTACAGGCACAGGTGGAGAGTCATTC  501

Query 1036  TGGGGGAAGCCCTTCAAAGACGAGTTCCGGCCCAACCTCTCGCACACGGGCCGCGGCATCCTCAGCATGGCCAA  1109
            |||||.|||||.||||||||.||||||||.||||||||.||.|||||||||||.||..|.||||||||||||||
Sbjct  502  TGGGGCAAGCCTTTCAAAGATGAGTTCCGTCCCAACCTTTCACACACGGGCCGTGGGGTGCTCAGCATGGCCAA  575

Query 1110  CTCCGGGCCCAACAGCAACAGGTCTCAATTCTTCATCACGTTTCGCTCCTGTGCCTACCTGGACAAGAAGCATA  1183
            .||.||||||||||.|||||..|||||.|||||||||||.||.||.|||||.||.||||||||.||||||||||
Sbjct  576  TTCGGGGCCCAACACCAACAAATCTCAGTTCTTCATCACATTCCGATCCTGCGCTTACCTGGATAAGAAGCATA  649

Query 1184  CCATCTTTGGACGGGTTGTTGGGGGCTTTGACGTACTGACAGCCATGGAGAATGTGGAGAGTGACCCCAAAACT  1257
            ||||||||||||||||||||||||||||||||...||||||||||||||||||||||||||||||||.||||||
Sbjct  650  CCATCTTTGGACGGGTTGTTGGGGGCTTTGACACGCTGACAGCCATGGAGAATGTGGAGAGTGACCCTAAAACT  723

Query 1258  GACCGCCCTAAGGAGGAGATCCGCATTGATG--CCACTACAGTGTTCGTGGACCCCTATGAGGAGGCCGATGCC  1329
            |||||.|||||||||||..|.|.|||  |||  |.||.||||||||.||||||||||||||||||||.||||||
Sbjct  724  GACCGTCCTAAGGAGGAAGTGCTCAT--ATGTACAACCACAGTGTTTGTGGACCCCTATGAGGAGGCTGATGCC  795

Query 1330  CAGATTGCGCAGGAGCG---GAAGACACAGC-TCAAGATAGCCCCGGAGACCAAAGTGAAGAGCAGCCAGCCCC  1399
            ||||||||.|||||.||   ||||||||||| || ||.|.|..||.|||.||||.||.||||..||.|||||||
Sbjct  796  CAGATTGCCCAGGAACGGAAGAAGACACAGCATC-AGGTGGATCCAGAGGCCAAGGTCAAGATGAGTCAGCCCC  868

Query 1400  AGGCAGGGAGCCAGGGCCCCCAGACCTTCCGCCAGGGCGTGGGCAAGTACATCAACCCAGCAGCCACGAAGCGA  1473
            ||.|.||.|.||||||.||||||||.|.|||||||||.|||||||||||||||.||||.||.||||||||.|||
Sbjct  869  AGCCTGGAAACCAGGGACCCCAGACATACCGCCAGGGGGTGGGCAAGTACATCCACCCTGCGGCCACGAAACGA  942

Query 1474  GCAGCAGAGGAAGAGCCCTCAACCAG---TGCCACTGTCCCCATGTCCAAGAAGAAGCCCAGTCGGGGTTTTGG  1544
            .|||||||||||||.||.||.|||||   ||||||   |||||.|.|||||||.|.||||||||||||.|||||
Sbjct  943  TCAGCAGAGGAAGAACCATCGACCAGCACTGCCAC---CCCCACGGCCAAGAAAAGGCCCAGTCGGGGCTTTGG  1013

Query 1545  GGACTTCAGCTCCTGG  1560
            ||||||||||||||||
Sbjct 1014  GGACTTCAGCTCCTGG  1029