Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_08187
- Subject:
- NM_001316893.2
- Aligned Length:
- 995
- Identities:
- 449
- Gaps:
- 511
Alignment
Query 1 ATGGGTGGTGTCATAAAGAGCATATTTACATTCGTTTTAATTGTGGAATTTATAATTGGAAATTTAGGAAATAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TTTCATAGCACTGGTGAACTGTATTGACTGGGTCAAGGGAAGAAAGATCTCTTCGGTTGATCGGATCCTCACTG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTTTGGCAATCTCTCGAATTAGCCTGGTTTGGTTAATATTCGGAAGCTGGTGTGTGTCTGTGTTTTTCCCAGCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTATTTGCCACTGAAAAAATGTTCAGAATGCTTACTAATATCTGGACAGTGATCAATCATTTTAGTGTCTGGTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTACAGGCCTCGGTACTTTTTATTTTCTCAAGATAGCCAATTTTTCTAACTCTATTTTTCTCTACCTAAAGT 370
|.||
Sbjct 1 ----------------------------------------------------------------------ATGT 4
Query 371 GGAGAGTTAAAAAGGTGGTTTTGGTGCTGCTTCT-------TGTGACTTCG-GTCT---TCTTGTTTTTAAATA 433
||||.|..|.|.| ||.|.||| ||.||.||.| |||| || ||||
Sbjct 5 GGAGGGGAATAGA-------------CTCCATCTATCCATATGAGAGTTGGAGTCTCACTC-TGTT-------- 56
Query 434 TTGCACTGATAAACATCCATATAAATGCC---AGTATCAATGGATACAGAAGAAACAAGACT---TGCAGTTCT 501
||||| |.| ||| |||.|| |.||.|.||.|.|| ||||| |||
Sbjct 57 --------------ATCCA-------GGCTGGAGT-TCAGTG------GTAGGATCATGGCTTACTGCAG-TCT 101
Query 502 GATTCAAGTAACT-------TTACACGATTTTC------CAGTCTTAT--TGTATTAACCAGCACTGTGTTCAT 560
|.|||| |.|.||.||..|| |||.|||.| || |||.| |...||
Sbjct 102 -------GGAACTCCTGGGCTCAAACCATCCTCCCACCTCAGCCTTCTGCTG-------CAGAA----GAATAT 157
Query 561 TTTCATACCCTTTACTTTGTCCCTGGCAA-----TGTTTCTTCTCCTCATCTTCTCCA-TGTGGAA------AC 622
||| .||| .|||| || ||| ||||.|||.| .|||||| ||
Sbjct 158 TTT----GCCT----------GCTGG-AACCTGCTGT-----------ATCTACTCAAGAGTGGAAGTTTTCAC 205
Query 623 ATCGCAAGAAGATGCAGCACACTGTCAAAATATCCGGAGACGCCAGCACCAAAGCCCACAGAGGAGTTAAAAGT 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 206 ------AGAAGATGCAGCACACTGTCAAAATATCCGGAGACGCCAGCACCAAAGCCCACAGAGGAGTTAAAAGT 273
Query 697 GTGATCACTTTCTTCCTACTCTATGCCATTTTCTCTCTGTCTTTTTTCATATCAGTTTGGACCTCTGAAAGGTT 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 GTGATCACTTTCTTCCTACTCTATGCCATTTTCTCTCTGTCTTTTTTCATATCAGTTTGGACCTCTGAAAGGTT 347
Query 771 GGAGGAAAATCTAATTATTCTTTCCCAGGTGATGGGAATGGCTTATCCTTCATGTCACTCATGTGTTCTGATTC 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348 GGAGGAAAATCTAATTATTCTTTCCCAGGTGATGGGAATGGCTTATCCTTCATGTCACTCATGTGTTCTGATTC 421
Query 845 TTGGAAACAAGAAGCTGAGACAGGCCTCTCTGTCAGTGCTACTGTGGCTGAGGTACATGTTCAAAGATGGGGAG 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 TTGGAAACAAGAAGCTGAGACAGGCCTCTCTGTCAGTGCTACTGTGGCTGAGGTACATGTTCAAAGATGGGGAG 495
Query 919 CCCTCAGGTCACAAAGAATTTAGAGAATCATCT 951
|||||||||||||||||||||||||||||||||
Sbjct 496 CCCTCAGGTCACAAAGAATTTAGAGAATCATCT 528