Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08562
Subject:
NM_001348187.1
Aligned Length:
2481
Identities:
2387
Gaps:
93

Alignment

Query    1  ATGGTACTTGCGCAAAGACGACGAGGAGGCTGCGAAAAGTTAAGGGCCGGACCGCAGGCTGTGCTCGCTTCCGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGTACTTGCGCAAAGACGACGAGGAGGCTGCGAAAAGTTAAGGGCCGGACCGCAGGCTGTGCTCGCTTCCGG  74

Query   75  AAGTGGCTTCTGCGACAACATGCTTGCGGACCTCGGCTTAATCGGAACCATAGGCGAGGATGACGAGGTGCCGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AAGTGGCTTCTGCGACAACATGCTTGCGGACCTCGGCTTAATCGGAACCATAGGCGAGGATGACGAGGTGCCGG  148

Query  149  TGGAGCCCGAGTCTGACTCCGGGGACGAGGAAGAGGAGGGGCCCATTGTGCTGGGCAGACGACAAAAAGCTTTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGGAGCCCGAGTCTGACTCCGGGGACGAGGAAGAGGAGGGGCCCATTGTGCTGGGCAGACGACAAAAAGCTTTG  222

Query  223  GGGAAGAACCGCAGTGCTGATTTCAACCCTGATTTCGTTTTCACTGAGAAGGAGGGGACGTACGATGGCAGCTG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGGAAGAACCGCAGTGCTGATTTCAACCCTGATTTCGTTTTCACTGAGAAGGAGGGGACGTACGATGGCAGCTG  296

Query  297  GGCCCTGGCTGATGTCATGAGCCAACTCAAGAAGAAGAGGGCAGCCACTACATTAGATGAGAAGATTGAGAAAG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCCCTGGCTGATGTCATGAGCCAACTCAAGAAGAAGAGGGCAGCCACTACATTAGATGAGAAGATTGAGAAAG  370

Query  371  TTCGAAAGAAAAGGAAAACAGAGGATAAAGAAGCCAAGTCTGGGAAGTTGGAAAAGGAGAAAGAAGCAAAGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTCGAAAGAAAAGGAAAACAGAGGATAAAGAAGCCAAGTCTGGGAAGTTGGAAAAGGAGAAAGAAGCAAAGGAA  444

Query  445  GGCTCTGAACCAAAGGAGCAGGAAGACCTTCAAGAGAATGATGAGGAAGGCTCAGAAGATGAAGCCTCGGAGAC  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCTCTGAACCAAAGGAGCAGGAAGACCTTCAAGAGAATGATGAGGAAGGCTCAGAAGATGAAGCCTCGGAGAC  518

Query  519  TGACTACTCATCAGCTGATGAGAACATCCTCACCAAAGCAGATACACTCAAAGTAAAGGATCGGAAGAAGAAGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGACTACTCATCAGCTGATGAGAACATCCTCACCAAAGCAGATACACTCAAAGTAAAGGATCGGAAGAAGAAGA  592

Query  593  AGAAGAAAGGACAGGAAGCAGGAGGATTTTTTGAAGATGCATCTCAGTACGATGAAAACCTCTCGTTCCAGGAC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAAGAAAGGACAGGAAGCAGGAGGATTTTTTGAAGATGCATCTCAGTACGATGAAAACCTCTCGTTCCAGGAC  666

Query  667  ATGAACCTTTCCCGCCCTCTTCTGAAGGCCATTACAGCCATGGGCTTCAAGCAGCCCACCCCGATCCAGAAGGC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATGAACCTTTCCCGCCCTCTTCTGAAGGCCATTACAGCCATGGGCTTCAAGCAGCCCACCCCGATCCAGAAGGC  740

Query  741  GTGCATACCTGTGGGTCTATTGGGGAAGGACATCTGTGCCTGTGCAGCCACTGGGACAGGTAAAACTGCCGCCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTGCATACCTGTGGGTCTATTGGGGAAGGACATCTGTGCCTGTGCAGCCACTGGGACAGGTAAAACTGCCGCCT  814

Query  815  TTGCCCTGCCTGTTTTGGAGCGTCTGATTTATAAACCCCGCCAGGCTCCAGTCACCCGCGTGCTGGTGCTAGTG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TTGCCCTGCCTGTTTTGGAGCGTCTGATTTATAAACCCCGCCAGGCTCCAGTCACCCGCGTGCTGGTGCTAGTG  888

Query  889  CCCACCCGAGAGCTGGGCATCCAGGTGCACTCTGTCACCAGACAGCTGGCCCAGTTCTGCAACATCACCACCTG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCCACCCGAGAGCTGGGCATCCAGGTGCACTCTGTCACCAGACAGCTGGCCCAGTTCTGCAACATCACCACCTG  962

Query  963  CCTGGCTGTGGGCGGCTTGGATGTGAAGTCTCAGGAAGCAGCTCTTCGGGCAGCGCCTGACATCCTCATCGCCA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTGGCTGTGGGCGGCTTGGATGTGAAGTCTCAGGAAGCAGCTCTTCGGGCAGCGCCTGACATCCTCATCGCCA  1036

Query 1037  CCCCAGGCCGGCTCATCGATCACCTCCACAACTGCCCTTCCTTCCACCTGAGCAGCATCGAGGTGCTCATCCTG  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CCCCAGGCCGGCTCATCGATCACCTCCACAACTGCCCTTCCTTCCACCTGAGCAGCATCGAGGTGCTCATCCTG  1110

Query 1111  GACGAGGCTGA---------------------------------------------------------------  1121
            |||||||||||                                                               
Sbjct 1111  GACGAGGCTGACAGCCCGCCTGTCGACACAGCCTGGCCACACGCCCCCACTTTGTGGCTTCTGCATTTGCCATT  1184

Query 1122  ------------------------------CAGGATGCTGGATGAGTACTTTGAGGAGCAGATGAAGGAGATCA  1165
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCCTCAGCCTGGAGCCATCTCCTGCCCCTTCAGGATGCTGGATGAGTACTTTGAGGAGCAGATGAAGGAGATCA  1258

Query 1166  TCCGAATGTGTTCCCACCACCGCCAGACCATGCTCTTCTCGGCCACCATGACAGACGAGGTGAAAGATCTGGCT  1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCGAATGTGTTCCCACCACCGCCAGACCATGCTCTTCTCGGCCACCATGACAGACGAGGTGAAAGATCTGGCT  1332

Query 1240  TCTGTCTCCTTGAAGAATCCTGTCCGGATATTTGTGAACAGCAACACAGATGTGGCTCCCTTCCTGCGGCAGGA  1313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCTGTCTCCTTGAAGAATCCTGTCCGGATATTTGTGAACAGCAACACAGATGTGGCTCCCTTCCTGCGGCAGGA  1406

Query 1314  GTTCATCCGGATCCGGCCTAATCGTGAAGGAGACCGGGAAGCCATCGTGGCAGCTTTGTTGACGAGGACCTTCA  1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GTTCATCCGGATCCGGCCTAATCGTGAAGGAGACCGGGAAGCCATCGTGGCAGCTTTGTTGACGAGGACCTTCA  1480

Query 1388  CTGACCATGTGATGCTGTTCACGCAAACCAAGAAGCAGGCCCACCGCATGCACATCCTCCTGGGGCTCATGGGG  1461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTGACCATGTGATGCTGTTCACGCAAACCAAGAAGCAGGCCCACCGCATGCACATCCTCCTGGGGCTCATGGGG  1554

Query 1462  CTGCAGGTGGGTGAGCTCCATGGCAACTTGTCACAGACGCAGCGGCTGGAGGCCCTCCGGCGTTTTAAGGATGA  1535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTGCAGGTGGGTGAGCTCCATGGCAACTTGTCACAGACGCAGCGGCTGGAGGCCCTCCGGCGTTTTAAGGATGA  1628

Query 1536  ACAGATTGACATCCTCGTGGCCACTGATGTGGCAGCCCGTGGACTTGACATTGAGGGGGTCAAAACGGTAATCA  1609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ACAGATTGACATCCTCGTGGCCACTGATGTGGCAGCCCGTGGACTTGACATTGAGGGGGTCAAAACGGTAATCA  1702

Query 1610  ACTTCACAATGCCTAATACCATCAAACATTATGTCCACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCTGGG  1683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACTTCACAATGCCTAATACCATCAAACATTATGTCCACCGGGTGGGGCGAACAGCACGTGCTGGCAGGGCTGGG  1776

Query 1684  CGCTCAGTCTCTCTGGTGGGAGAAGATGAGCGGAAGATGCTGAAGGAGATTGTAAAAGCTGCCAAGGCCCCTGT  1757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CGCTCAGTCTCTCTGGTGGGAGAAGATGAGCGGAAGATGCTGAAGGAGATTGTAAAAGCTGCCAAGGCCCCTGT  1850

Query 1758  GAAGGCCAGGATACTTCCCCAAGATGTCATCCTCAAATTCCGGGACAAGATTGAGAAAATGGAGAAAGATGTGT  1831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GAAGGCCAGGATACTTCCCCAAGATGTCATCCTCAAATTCCGGGACAAGATTGAGAAAATGGAGAAAGATGTGT  1924

Query 1832  ATGCAGTTCTGCAGCTAGAGGCGGAGGAAAAAGAGATGCAGCAGTCAGAAGCCCAGATCAATACAGCAAAGCGG  1905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ATGCAGTTCTGCAGCTAGAGGCGGAGGAAAAAGAGATGCAGCAGTCAGAAGCCCAGATCAATACAGCAAAGCGG  1998

Query 1906  CTCCTGGAGAAGGGGAAGGAGGCAGTGGTCCAAGAGCCCGAGAGGAGCTGGTTCCAGACCAAAGAAGAGAGGAA  1979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CTCCTGGAGAAGGGGAAGGAGGCAGTGGTCCAAGAGCCCGAGAGGAGCTGGTTCCAGACCAAAGAAGAGAGGAA  2072

Query 1980  GAAGGAGAAAATTGCCAAAGCTCTGCAGGAATTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAAGTTTA  2053
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GAAGGAGAAAATTGCCAAAGCTCTGCAGGAATTTGACTTGGCCTTAAGAGGAAAGAAGAAAAGGAAGAAGTTTA  2146

Query 2054  TGAAGGATGCCAAAAAAAAGGGGGAGATGACAGCAGAGGAAAGGTCTCAGTTTGAAACCCTCAAGGCGCAGATG  2127
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 2147  TGAAGGATGCCAAAAAAAAGGGGGAGATGACAGCAGAGGAAAGGTCTCAGTTTGAAATCCTCAAGGCGCAGATG  2220

Query 2128  TTTGCTGAACGGCTAGCGAAGAGGAATCGCAGAGCCAAGCGGGCCCGAGCAATGCCCGAGGAGGAGCCAGTGAG  2201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  TTTGCTGAACGGCTAGCGAAGAGGAATCGCAGAGCCAAGCGGGCCCGAGCAATGCCCGAGGAGGAGCCAGTGAG  2294

Query 2202  AGGTCCTGCCAAGAAGCAAAAGCAGGGGAAGAAATCTGTATTTGATGAAGAACTCACCAACACAAGCAAGAAGG  2275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGGTCCTGCCAAGAAGCAAAAGCAGGGGAAGAAATCTGTATTTGATGAAGAACTCACCAACACAAGCAAGAAGG  2368

Query 2276  CCCTGAAACAGTATCGAGCTGGCCCTTCCTTTGAAGAAAGGAAACAGTTGGGCTTGCCCCACCAGAGACGAGGA  2349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  CCCTGAAACAGTATCGAGCTGGCCCTTCCTTTGAAGAAAGGAAACAGTTGGGCTTGCCCCACCAGAGACGAGGA  2442

Query 2350  GGAAACTTTAAATCTAAATCCAGATACAAGAGGAGGAAG  2388
            |||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GGAAACTTTAAATCTAAATCCAGATACAAGAGGAGGAAG  2481

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