Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_09677
- Subject:
- NR_148055.2
- Aligned Length:
- 2621
- Identities:
- 942
- Gaps:
- 1677
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTAATTAGAGCTAAGCGGCAATTACAGGACGTATGATTTGTTCAGAAGCACTGCCTGCCGGCTGTTTCCTAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCACATTTCACGGGAGCACCAGGTTGAGATGATGGAATTATTTACTTTTAAATGTAACATCTCGTACAGTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAATGCAGACGTGAACGTGGACTGTAACCTTAAAAACAAAGGCAGTACATGCCACACTACTACCCTTCCTGCT 222
Query 1 ---------------------ATGATGCATCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAG 53
||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTGTGCGCACACCTACCCTGATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAG 296
Query 54 TAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATGGATCCTGTGCAAAAAGCGGTTATTAACCATACAT 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAGTTCTGCTGTTGGGCTCTTTCCAAATTTTAACACAATGGATCCTGTGCAAAAAGCGGTTATTAACCATACAT 370
Query 128 TTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGAT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGGAGTATCCATTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGAT 444
Query 202 AGCCAGGCCGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAA 275
Sbjct 445 -------------------------------------------------------------------------- 444
Query 276 ACCCAAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACA 349
Sbjct 445 -------------------------------------------------------------------------- 444
Query 350 ACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ---------------AAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGTGGC 503
Query 424 TCATTTATCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGG 497
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCACAAATGG 577
Query 498 AGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGG 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 AGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACTATGCAAAGTGG 651
Query 572 CTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAAT 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 652 CTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATGGTTGAAGCTCGTAAT 725
Query 646 GGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGG 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 GGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGAATGGCAGTAAGGGGTCAGG 799
Query 720 ACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACA 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 800 ACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTCAGAAATTCAACTCAAACAGCACA 873
Query 794 TTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTC 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 TTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAGCCAAAATACAGCCCTTACAACAAACTC 947
Query 868 CAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTT 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 CAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGAAAGATATGATGAAGCCTTTGGCCCCAGCCTT 1021
Query 942 CCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGC 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 CCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTCAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGC 1095
Query 1016 TCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCC 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096 TCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTGAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCC 1169
Query 1090 ATCCTCTTTGCTCCGTAC-------------------------------------------------------- 1107
||||||||||||||||||
Sbjct 1170 ATCCTCTTTGCTCCGTACTAACGTCTGCAAACCCCAAGACGTTTGAGGCCAGTAGGAAGTTGAGAAAGAAAGCC 1243
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1244 ACAAGGATTCAGCAATTTAAGCAGTTTGTGTTGCAGTACCCCCCATTCACCCACAAAATGCAGCCCACCACCCA 1317
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1318 GTCCCCCAATTCCAGAGAGAAACACATCACTAGATTGACGAGGGCTTTTAGAGACTGCTCCTATAATTGAGGAA 1391
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1392 TCAGCAGCATAGGCTTTATCTCCCTACTTCCTCCCCCACCCTACCGCGTTCAATTTGTGTATCTCAGATATTTG 1465
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1466 ATTTCTTGAGCATGTATTGGTCAGAAAGAAAAAGAAAGAAAACCATTCTCTATTTTTCCATGGGTATGATCTGG 1539
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1540 CTTAAAACAATATGGAATATTTTCCTGACAGACTTGAAAACTAGGATCTTCCTCAGATGTCTGTAAATAACTCT 1613
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1614 GGTATCCAACTGGGTGTATTCTAGTGTGGAACAAAAAACAGTGAACACAAGTGCTTACTTGTGGATACTATCTT 1687
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1688 ACCAACGGATCACAAAGTTCTCTTTTTGGTGTACTGTTGTTGACAGGGATTGTGTACTGTTTCGACCCAAGTAC 1761
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1762 TGCTGTATCCTGTGTAGTACTAGATCTGTATCTCTTGTCTGAATTAAACATTTTTAGTTGCTGTGTAAATGTTA 1835
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1836 GGAAGCAAAGTAGCTTTGAATTTTCTCTGTAAGAGAATAAAAGATAAAATAATGTATTTTCTTTATTTCACATT 1909
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1910 TTATTTGGAGATATTTAAATGAAATAGAAAGCCATATAACATAGCTATAATTACTACCTGTTTGCTATTTTTGT 1983
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 1984 TTAACTTATTTTGTAGCTTCCTCACTGGTTTGTGTTGCTAAGCAAACGTATACAAACAGAAAAAGAGCTTCCTA 2057
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2058 AATTGCACATTTTTGCACCTCTTGTGCATTCTGCAAGAAGACAATGAATCCATGTATTTCTATATAAGTATCTT 2131
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2132 CTTCATTTTTAACCTGTTTTCATTTGTAATGATGCTACATAATTTTGTGGCTCCCTAATGCAATAATGTACAGA 2205
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2206 AGATAAAAAAATTTATAATTGAACAATTTGTCTTTCTGTTCGCTGAATATATTGCAGGTCATGCTCCCATGCCC 2279
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2280 CCCTTTCTAAGCCGATATCAACAAGACTGGAATGTTTGTGATATCAGGGGCAAGAGTTATCATAGAACAACAAA 2353
Query 1108 -------------------------------------------------------------------------- 1107
Sbjct 2354 ATAGAGTGGACTCTTTTAGAGCATCTATATCTGCAACCTGTAAATGGTAAAATGTCTGTGTATTTTTTTAAATG 2427
Query 1108 ------------------------------- 1107
Sbjct 2428 TACCTTTTCAATAAAAGTACAAAAAATAAAA 2458
